data_7Z9I # _model_server_result.job_id JF1RlNWB80cYVa23Q4Y-bw _model_server_result.datetime_utc '2024-11-22 05:52:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z9i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1206}' # _entry.id 7Z9I # _exptl.entry_id 7Z9I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.089 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{S})-2-acetamido-~{N}-(3-bromanylprop-2-ynyl)propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7Z9I _cell.length_a 79.435 _cell.length_b 79.435 _cell.length_c 137.648 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z9I _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H11 Br N2 O2' _chem_comp.formula_weight 247.089 _chem_comp.id IJR _chem_comp.mon_nstd_flag . _chem_comp.name (2~{S})-2-acetamido-~{N}-(3-bromanylprop-2-ynyl)propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C8 IJR sing 161 n n C8 C7 IJR trip 162 n n C7 C6 IJR sing 163 n n C6 N2 IJR sing 164 n n C1 C2 IJR sing 165 n n N2 C5 IJR sing 166 n n C2 N1 IJR sing 167 n n C2 O1 IJR doub 168 n n N1 C3 IJR sing 169 n n C5 O2 IJR doub 170 n n C5 C3 IJR sing 171 n n C3 C4 IJR sing 172 n n C4 H8 IJR sing 173 n n C4 H6 IJR sing 174 n n C4 H7 IJR sing 175 n n C6 H11 IJR sing 176 n n C6 H10 IJR sing 177 n n N1 H4 IJR sing 178 n n N2 H9 IJR sing 179 n n C3 H5 IJR sing 180 n n C1 H1 IJR sing 181 n n C1 H2 IJR sing 182 n n C1 H3 IJR sing 183 n n # _atom_sites.entry_id 7Z9I _atom_sites.fract_transf_matrix[1][1] 0.012589 _atom_sites.fract_transf_matrix[1][2] 0.007268 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007265 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 AAA 1 1201 1 SO4 SO4 . C 3 CL AAA 1 1202 1109 CL CL . D 4 EDO AAA 1 1203 1 EDO EDO . E 4 EDO AAA 1 1204 2 EDO EDO . F 2 SO4 AAA 1 1205 1 SO4 SO4 . G 5 IJR AAA 1 1206 1 IJR DRG . H 6 HOH AAA 1 1301 144 HOH HOH . H 6 HOH AAA 2 1302 175 HOH HOH . H 6 HOH AAA 3 1303 166 HOH HOH . H 6 HOH AAA 4 1304 178 HOH HOH . H 6 HOH AAA 5 1305 164 HOH HOH . H 6 HOH AAA 6 1306 158 HOH HOH . H 6 HOH AAA 7 1307 185 HOH HOH . H 6 HOH AAA 8 1308 168 HOH HOH . H 6 HOH AAA 9 1309 157 HOH HOH . H 6 HOH AAA 10 1310 149 HOH HOH . H 6 HOH AAA 11 1311 213 HOH HOH . H 6 HOH AAA 12 1312 65 HOH HOH . H 6 HOH AAA 13 1313 67 HOH HOH . H 6 HOH AAA 14 1314 47 HOH HOH . H 6 HOH AAA 15 1315 215 HOH HOH . H 6 HOH AAA 16 1316 162 HOH HOH . H 6 HOH AAA 17 1317 124 HOH HOH . H 6 HOH AAA 18 1318 104 HOH HOH . H 6 HOH AAA 19 1319 49 HOH HOH . H 6 HOH AAA 20 1320 147 HOH HOH . H 6 HOH AAA 21 1321 100 HOH HOH . H 6 HOH AAA 22 1322 159 HOH HOH . H 6 HOH AAA 23 1323 161 HOH HOH . H 6 HOH AAA 24 1324 249 HOH HOH . H 6 HOH AAA 25 1325 197 HOH HOH . H 6 HOH AAA 26 1326 150 HOH HOH . H 6 HOH AAA 27 1327 42 HOH HOH . H 6 HOH AAA 28 1328 23 HOH HOH . H 6 HOH AAA 29 1329 95 HOH HOH . H 6 HOH AAA 30 1330 245 HOH HOH . H 6 HOH AAA 31 1331 55 HOH HOH . H 6 HOH AAA 32 1332 73 HOH HOH . H 6 HOH AAA 33 1333 129 HOH HOH . H 6 HOH AAA 34 1334 241 HOH HOH . H 6 HOH AAA 35 1335 77 HOH HOH . H 6 HOH AAA 36 1336 51 HOH HOH . H 6 HOH AAA 37 1337 243 HOH HOH . H 6 HOH AAA 38 1338 244 HOH HOH . H 6 HOH AAA 39 1339 22 HOH HOH . H 6 HOH AAA 40 1340 15 HOH HOH . H 6 HOH AAA 41 1341 24 HOH HOH . H 6 HOH AAA 42 1342 87 HOH HOH . H 6 HOH AAA 43 1343 207 HOH HOH . H 6 HOH AAA 44 1344 251 HOH HOH . H 6 HOH AAA 45 1345 69 HOH HOH . H 6 HOH AAA 46 1346 98 HOH HOH . H 6 HOH AAA 47 1347 234 HOH HOH . H 6 HOH AAA 48 1348 170 HOH HOH . H 6 HOH AAA 49 1349 72 HOH HOH . H 6 HOH AAA 50 1350 126 HOH HOH . H 6 HOH AAA 51 1351 120 HOH HOH . H 6 HOH AAA 52 1352 250 HOH HOH . H 6 HOH AAA 53 1353 76 HOH HOH . H 6 HOH AAA 54 1354 13 HOH HOH . H 6 HOH AAA 55 1355 193 HOH HOH . H 6 HOH AAA 56 1356 1 HOH HOH . H 6 HOH AAA 57 1357 32 HOH HOH . H 6 HOH AAA 58 1358 8 HOH HOH . H 6 HOH AAA 59 1359 113 HOH HOH . H 6 HOH AAA 60 1360 14 HOH HOH . H 6 HOH AAA 61 1361 114 HOH HOH . H 6 HOH AAA 62 1362 33 HOH HOH . H 6 HOH AAA 63 1363 132 HOH HOH . H 6 HOH AAA 64 1364 226 HOH HOH . H 6 HOH AAA 65 1365 71 HOH HOH . H 6 HOH AAA 66 1366 19 HOH HOH . H 6 HOH AAA 67 1367 151 HOH HOH . H 6 HOH AAA 68 1368 2 HOH HOH . H 6 HOH AAA 69 1369 39 HOH HOH . H 6 HOH AAA 70 1370 102 HOH HOH . H 6 HOH AAA 71 1371 83 HOH HOH . H 6 HOH AAA 72 1372 37 HOH HOH . H 6 HOH AAA 73 1373 240 HOH HOH . H 6 HOH AAA 74 1374 61 HOH HOH . H 6 HOH AAA 75 1375 34 HOH HOH . H 6 HOH AAA 76 1376 128 HOH HOH . H 6 HOH AAA 77 1377 40 HOH HOH . H 6 HOH AAA 78 1378 109 HOH HOH . H 6 HOH AAA 79 1379 93 HOH HOH . H 6 HOH AAA 80 1380 11 HOH HOH . H 6 HOH AAA 81 1381 26 HOH HOH . H 6 HOH AAA 82 1382 10 HOH HOH . H 6 HOH AAA 83 1383 53 HOH HOH . H 6 HOH AAA 84 1384 58 HOH HOH . H 6 HOH AAA 85 1385 133 HOH HOH . H 6 HOH AAA 86 1386 75 HOH HOH . H 6 HOH AAA 87 1387 21 HOH HOH . H 6 HOH AAA 88 1388 41 HOH HOH . H 6 HOH AAA 89 1389 36 HOH HOH . H 6 HOH AAA 90 1390 91 HOH HOH . H 6 HOH AAA 91 1391 110 HOH HOH . H 6 HOH AAA 92 1392 35 HOH HOH . H 6 HOH AAA 93 1393 117 HOH HOH . H 6 HOH AAA 94 1394 57 HOH HOH . H 6 HOH AAA 95 1395 29 HOH HOH . H 6 HOH AAA 96 1396 43 HOH HOH . H 6 HOH AAA 97 1397 3 HOH HOH . H 6 HOH AAA 98 1398 52 HOH HOH . H 6 HOH AAA 99 1399 188 HOH HOH . H 6 HOH AAA 100 1400 50 HOH HOH . H 6 HOH AAA 101 1401 97 HOH HOH . H 6 HOH AAA 102 1402 176 HOH HOH . H 6 HOH AAA 103 1403 173 HOH HOH . H 6 HOH AAA 104 1404 6 HOH HOH . H 6 HOH AAA 105 1405 105 HOH HOH . H 6 HOH AAA 106 1406 169 HOH HOH . H 6 HOH AAA 107 1407 156 HOH HOH . H 6 HOH AAA 108 1408 79 HOH HOH . H 6 HOH AAA 109 1409 74 HOH HOH . H 6 HOH AAA 110 1410 38 HOH HOH . H 6 HOH AAA 111 1411 20 HOH HOH . H 6 HOH AAA 112 1412 4 HOH HOH . H 6 HOH AAA 113 1413 246 HOH HOH . H 6 HOH AAA 114 1414 220 HOH HOH . H 6 HOH AAA 115 1415 90 HOH HOH . H 6 HOH AAA 116 1416 199 HOH HOH . H 6 HOH AAA 117 1417 25 HOH HOH . H 6 HOH AAA 118 1418 48 HOH HOH . H 6 HOH AAA 119 1419 64 HOH HOH . H 6 HOH AAA 120 1420 85 HOH HOH . H 6 HOH AAA 121 1421 182 HOH HOH . H 6 HOH AAA 122 1422 66 HOH HOH . H 6 HOH AAA 123 1423 211 HOH HOH . H 6 HOH AAA 124 1424 121 HOH HOH . H 6 HOH AAA 125 1425 107 HOH HOH . H 6 HOH AAA 126 1426 145 HOH HOH . H 6 HOH AAA 127 1427 88 HOH HOH . H 6 HOH AAA 128 1428 31 HOH HOH . H 6 HOH AAA 129 1429 153 HOH HOH . H 6 HOH AAA 130 1430 108 HOH HOH . H 6 HOH AAA 131 1431 210 HOH HOH . H 6 HOH AAA 132 1432 171 HOH HOH . H 6 HOH AAA 133 1433 155 HOH HOH . H 6 HOH AAA 134 1434 221 HOH HOH . H 6 HOH AAA 135 1435 195 HOH HOH . H 6 HOH AAA 136 1436 9 HOH HOH . H 6 HOH AAA 137 1437 86 HOH HOH . H 6 HOH AAA 138 1438 247 HOH HOH . H 6 HOH AAA 139 1439 201 HOH HOH . H 6 HOH AAA 140 1440 123 HOH HOH . H 6 HOH AAA 141 1441 152 HOH HOH . H 6 HOH AAA 142 1442 28 HOH HOH . H 6 HOH AAA 143 1443 174 HOH HOH . H 6 HOH AAA 144 1444 136 HOH HOH . H 6 HOH AAA 145 1445 204 HOH HOH . H 6 HOH AAA 146 1446 130 HOH HOH . H 6 HOH AAA 147 1447 239 HOH HOH . H 6 HOH AAA 148 1448 16 HOH HOH . H 6 HOH AAA 149 1449 172 HOH HOH . H 6 HOH AAA 150 1450 187 HOH HOH . H 6 HOH AAA 151 1451 200 HOH HOH . H 6 HOH AAA 152 1452 112 HOH HOH . H 6 HOH AAA 153 1453 146 HOH HOH . H 6 HOH AAA 154 1454 186 HOH HOH . H 6 HOH AAA 155 1455 81 HOH HOH . H 6 HOH AAA 156 1456 82 HOH HOH . H 6 HOH AAA 157 1457 7 HOH HOH . H 6 HOH AAA 158 1458 27 HOH HOH . H 6 HOH AAA 159 1459 208 HOH HOH . H 6 HOH AAA 160 1460 68 HOH HOH . H 6 HOH AAA 161 1461 219 HOH HOH . H 6 HOH AAA 162 1462 183 HOH HOH . H 6 HOH AAA 163 1463 198 HOH HOH . H 6 HOH AAA 164 1464 224 HOH HOH . H 6 HOH AAA 165 1465 30 HOH HOH . H 6 HOH AAA 166 1466 119 HOH HOH . H 6 HOH AAA 167 1467 137 HOH HOH . H 6 HOH AAA 168 1468 141 HOH HOH . H 6 HOH AAA 169 1469 115 HOH HOH . H 6 HOH AAA 170 1470 63 HOH HOH . H 6 HOH AAA 171 1471 184 HOH HOH . H 6 HOH AAA 172 1472 233 HOH HOH . H 6 HOH AAA 173 1473 5 HOH HOH . H 6 HOH AAA 174 1474 180 HOH HOH . H 6 HOH AAA 175 1475 62 HOH HOH . H 6 HOH AAA 176 1476 78 HOH HOH . H 6 HOH AAA 177 1477 103 HOH HOH . H 6 HOH AAA 178 1478 56 HOH HOH . H 6 HOH AAA 179 1479 46 HOH HOH . H 6 HOH AAA 180 1480 140 HOH HOH . H 6 HOH AAA 181 1481 99 HOH HOH . H 6 HOH AAA 182 1482 167 HOH HOH . H 6 HOH AAA 183 1483 165 HOH HOH . H 6 HOH AAA 184 1484 218 HOH HOH . H 6 HOH AAA 185 1485 80 HOH HOH . H 6 HOH AAA 186 1486 206 HOH HOH . H 6 HOH AAA 187 1487 143 HOH HOH . H 6 HOH AAA 188 1488 139 HOH HOH . H 6 HOH AAA 189 1489 135 HOH HOH . H 6 HOH AAA 190 1490 45 HOH HOH . H 6 HOH AAA 191 1491 60 HOH HOH . H 6 HOH AAA 192 1492 231 HOH HOH . H 6 HOH AAA 193 1493 205 HOH HOH . H 6 HOH AAA 194 1494 237 HOH HOH . H 6 HOH AAA 195 1495 44 HOH HOH . H 6 HOH AAA 196 1496 242 HOH HOH . H 6 HOH AAA 197 1497 248 HOH HOH . H 6 HOH AAA 198 1498 232 HOH HOH . H 6 HOH AAA 199 1499 196 HOH HOH . H 6 HOH AAA 200 1500 154 HOH HOH . H 6 HOH AAA 201 1501 238 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 IJR . . . G 5 -27.036 45.484 13.148 1 81.5 ? C4 IJR 1206 AAA 1 HETATM 2 C C5 IJR . . . G 5 -28.339 44.346 11.362 1 98.76 ? C5 IJR 1206 AAA 1 HETATM 3 C C6 IJR . . . G 5 -29.677 45.011 9.403 1 111.43 ? C6 IJR 1206 AAA 1 HETATM 4 C C7 IJR . . . G 5 -29.515 45.875 8.228 1 117.26 ? C7 IJR 1206 AAA 1 HETATM 5 C C8 IJR . . . G 5 -29.217 46.535 7.281 1 144.21 ? C8 IJR 1206 AAA 1 HETATM 6 N N1 IJR . . . G 5 -25.86 44.697 11.161 1 73.99 ? N1 IJR 1206 AAA 1 HETATM 7 N N2 IJR . . . G 5 -28.412 44.813 10.108 1 107.26 ? N2 IJR 1206 AAA 1 HETATM 8 C C3 IJR . . . G 5 -26.976 44.422 12.058 1 83.5 ? C3 IJR 1206 AAA 1 HETATM 9 C C1 IJR . . . G 5 -23.851 44.191 9.923 1 62.97 ? C1 IJR 1206 AAA 1 HETATM 10 C C2 IJR . . . G 5 -24.775 43.913 11.075 1 61.12 ? C2 IJR 1206 AAA 1 HETATM 11 O O1 IJR . . . G 5 -24.533 43.032 11.909 1 40.09 ? O1 IJR 1206 AAA 1 HETATM 12 O O2 IJR . . . G 5 -29.301 43.868 11.959 1 105.52 ? O2 IJR 1206 AAA 1 HETATM 13 BR BR1 IJR . . . G 5 -28.495 47.317 5.64 1 215.07 ? BR1 IJR 1206 AAA 1 HETATM 14 H H8 IJR . . . G 5 -26.838 45.078 14.004 1 81.67 ? H8 IJR 1206 AAA 1 HETATM 15 H H6 IJR . . . G 5 -27.926 45.876 13.176 1 82.08 ? H6 IJR 1206 AAA 1 HETATM 16 H H7 IJR . . . G 5 -26.383 46.181 12.964 1 82.01 ? H7 IJR 1206 AAA 1 HETATM 17 H H11 IJR . . . G 5 -30.031 44.134 9.115 1 111.25 ? H11 IJR 1206 AAA 1 HETATM 18 H H10 IJR . . . G 5 -30.333 45.42 10.019 1 111.63 ? H10 IJR 1206 AAA 1 HETATM 19 H H4 IJR . . . G 5 -25.884 45.422 10.675 1 72.87 ? H4 IJR 1206 AAA 1 HETATM 20 H H9 IJR . . . G 5 -27.675 45 9.681 1 105.86 ? H9 IJR 1206 AAA 1 HETATM 21 H H5 IJR . . . G 5 -26.816 43.548 12.492 1 83.53 ? H5 IJR 1206 AAA 1 HETATM 22 H H1 IJR . . . G 5 -24.196 44.93 9.396 1 62.45 ? H1 IJR 1206 AAA 1 HETATM 23 H H2 IJR . . . G 5 -23.784 43.402 9.362 1 62.41 ? H2 IJR 1206 AAA 1 HETATM 24 H H3 IJR . . . G 5 -22.971 44.422 10.261 1 62.41 ? H3 IJR 1206 AAA 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #