data_7Z9U
#
_model_server_result.job_id            HP4n2S3SibBmcB75EdJobA 
_model_server_result.datetime_utc      '2024-11-16 19:47:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z9u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1205}' 
#
_entry.id    7Z9U 
#
_exptl.entry_id    7Z9U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7Z9U 
_cell.length_a            79.029 
_cell.length_b            79.029 
_cell.length_c            137.875 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z9U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             79 
_struct_conn.ptnr1_auth_asym_id             AAA 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              1057 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             101 
_struct_conn.ptnr2_auth_asym_id             AAA 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              1079 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.14 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 120 n n 
C1 C2 EDO sing 121 n n 
C1 H11 EDO sing 122 n n 
C1 H12 EDO sing 123 n n 
O1 HO1 EDO sing 124 n n 
C2 O2 EDO sing 125 n n 
C2 H21 EDO sing 126 n n 
C2 H22 EDO sing 127 n n 
O2 HO2 EDO sing 128 n n 
#
_atom_sites.entry_id                     7Z9U 
_atom_sites.fract_transf_matrix[1][1]    0.012654 
_atom_sites.fract_transf_matrix[1][2]    0.007306 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014611 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007253 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ARG AAA 1 1201 1108 ARG ARG . 
C 3 SO4 AAA 1 1202 1 SO4 SO4 . 
D 4 CL AAA 1 1203 1109 CL CL . 
E 5 EDO AAA 1 1204 1 EDO EDO . 
F 5 EDO AAA 1 1205 2 EDO EDO . 
G 5 EDO AAA 1 1206 3 EDO EDO . 
H 5 EDO AAA 1 1207 4 EDO EDO . 
I 5 EDO AAA 1 1208 5 EDO EDO . 
J 3 SO4 AAA 1 1209 1 SO4 SO4 . 
K 6 8WS AAA 1 1210 2 8WS DRG . 
L 7 HOH AAA 1 1301 236 HOH HOH . 
L 7 HOH AAA 2 1302 159 HOH HOH . 
L 7 HOH AAA 3 1303 158 HOH HOH . 
L 7 HOH AAA 4 1304 193 HOH HOH . 
L 7 HOH AAA 5 1305 240 HOH HOH . 
L 7 HOH AAA 6 1306 255 HOH HOH . 
L 7 HOH AAA 7 1307 24 HOH HOH . 
L 7 HOH AAA 8 1308 124 HOH HOH . 
L 7 HOH AAA 9 1309 61 HOH HOH . 
L 7 HOH AAA 10 1310 104 HOH HOH . 
L 7 HOH AAA 11 1311 49 HOH HOH . 
L 7 HOH AAA 12 1312 234 HOH HOH . 
L 7 HOH AAA 13 1313 47 HOH HOH . 
L 7 HOH AAA 14 1314 147 HOH HOH . 
L 7 HOH AAA 15 1315 51 HOH HOH . 
L 7 HOH AAA 16 1316 22 HOH HOH . 
L 7 HOH AAA 17 1317 37 HOH HOH . 
L 7 HOH AAA 18 1318 23 HOH HOH . 
L 7 HOH AAA 19 1319 120 HOH HOH . 
L 7 HOH AAA 20 1320 246 HOH HOH . 
L 7 HOH AAA 21 1321 55 HOH HOH . 
L 7 HOH AAA 22 1322 242 HOH HOH . 
L 7 HOH AAA 23 1323 71 HOH HOH . 
L 7 HOH AAA 24 1324 241 HOH HOH . 
L 7 HOH AAA 25 1325 39 HOH HOH . 
L 7 HOH AAA 26 1326 14 HOH HOH . 
L 7 HOH AAA 27 1327 253 HOH HOH . 
L 7 HOH AAA 28 1328 15 HOH HOH . 
L 7 HOH AAA 29 1329 77 HOH HOH . 
L 7 HOH AAA 30 1330 243 HOH HOH . 
L 7 HOH AAA 31 1331 197 HOH HOH . 
L 7 HOH AAA 32 1332 245 HOH HOH . 
L 7 HOH AAA 33 1333 57 HOH HOH . 
L 7 HOH AAA 34 1334 13 HOH HOH . 
L 7 HOH AAA 35 1335 107 HOH HOH . 
L 7 HOH AAA 36 1336 114 HOH HOH . 
L 7 HOH AAA 37 1337 132 HOH HOH . 
L 7 HOH AAA 38 1338 8 HOH HOH . 
L 7 HOH AAA 39 1339 129 HOH HOH . 
L 7 HOH AAA 40 1340 53 HOH HOH . 
L 7 HOH AAA 41 1341 69 HOH HOH . 
L 7 HOH AAA 42 1342 1 HOH HOH . 
L 7 HOH AAA 43 1343 32 HOH HOH . 
L 7 HOH AAA 44 1344 113 HOH HOH . 
L 7 HOH AAA 45 1345 21 HOH HOH . 
L 7 HOH AAA 46 1346 238 HOH HOH . 
L 7 HOH AAA 47 1347 169 HOH HOH . 
L 7 HOH AAA 48 1348 2 HOH HOH . 
L 7 HOH AAA 49 1349 175 HOH HOH . 
L 7 HOH AAA 50 1350 40 HOH HOH . 
L 7 HOH AAA 51 1351 72 HOH HOH . 
L 7 HOH AAA 52 1352 58 HOH HOH . 
L 7 HOH AAA 53 1353 33 HOH HOH . 
L 7 HOH AAA 54 1354 73 HOH HOH . 
L 7 HOH AAA 55 1355 35 HOH HOH . 
L 7 HOH AAA 56 1356 52 HOH HOH . 
L 7 HOH AAA 57 1357 19 HOH HOH . 
L 7 HOH AAA 58 1358 127 HOH HOH . 
L 7 HOH AAA 59 1359 239 HOH HOH . 
L 7 HOH AAA 60 1360 128 HOH HOH . 
L 7 HOH AAA 61 1361 38 HOH HOH . 
L 7 HOH AAA 62 1362 41 HOH HOH . 
L 7 HOH AAA 63 1363 43 HOH HOH . 
L 7 HOH AAA 64 1364 64 HOH HOH . 
L 7 HOH AAA 65 1365 3 HOH HOH . 
L 7 HOH AAA 66 1366 237 HOH HOH . 
L 7 HOH AAA 67 1367 20 HOH HOH . 
L 7 HOH AAA 68 1368 68 HOH HOH . 
L 7 HOH AAA 69 1369 48 HOH HOH . 
L 7 HOH AAA 70 1370 25 HOH HOH . 
L 7 HOH AAA 71 1371 50 HOH HOH . 
L 7 HOH AAA 72 1372 248 HOH HOH . 
L 7 HOH AAA 73 1373 195 HOH HOH . 
L 7 HOH AAA 74 1374 249 HOH HOH . 
L 7 HOH AAA 75 1375 66 HOH HOH . 
L 7 HOH AAA 76 1376 9 HOH HOH . 
L 7 HOH AAA 77 1377 252 HOH HOH . 
L 7 HOH AAA 78 1378 87 HOH HOH . 
L 7 HOH AAA 79 1379 188 HOH HOH . 
L 7 HOH AAA 80 1380 74 HOH HOH . 
L 7 HOH AAA 81 1381 76 HOH HOH . 
L 7 HOH AAA 82 1382 88 HOH HOH . 
L 7 HOH AAA 83 1383 244 HOH HOH . 
L 7 HOH AAA 84 1384 117 HOH HOH . 
L 7 HOH AAA 85 1385 139 HOH HOH . 
L 7 HOH AAA 86 1386 135 HOH HOH . 
L 7 HOH AAA 87 1387 198 HOH HOH . 
L 7 HOH AAA 88 1388 168 HOH HOH . 
L 7 HOH AAA 89 1389 194 HOH HOH . 
L 7 HOH AAA 90 1390 16 HOH HOH . 
L 7 HOH AAA 91 1391 254 HOH HOH . 
L 7 HOH AAA 92 1392 204 HOH HOH . 
L 7 HOH AAA 93 1393 56 HOH HOH . 
L 7 HOH AAA 94 1394 227 HOH HOH . 
L 7 HOH AAA 95 1395 123 HOH HOH . 
L 7 HOH AAA 96 1396 27 HOH HOH . 
L 7 HOH AAA 97 1397 82 HOH HOH . 
L 7 HOH AAA 98 1398 30 HOH HOH . 
L 7 HOH AAA 99 1399 171 HOH HOH . 
L 7 HOH AAA 100 1400 251 HOH HOH . 
L 7 HOH AAA 101 1401 217 HOH HOH . 
L 7 HOH AAA 102 1402 228 HOH HOH . 
L 7 HOH AAA 103 1403 137 HOH HOH . 
L 7 HOH AAA 104 1404 186 HOH HOH . 
L 7 HOH AAA 105 1405 62 HOH HOH . 
L 7 HOH AAA 106 1406 5 HOH HOH . 
L 7 HOH AAA 107 1407 60 HOH HOH . 
L 7 HOH AAA 108 1408 250 HOH HOH . 
L 7 HOH AAA 109 1409 45 HOH HOH . 
L 7 HOH AAA 110 1410 70 HOH HOH . 
L 7 HOH AAA 111 1411 232 HOH HOH . 
L 7 HOH AAA 112 1412 44 HOH HOH . 
L 7 HOH AAA 113 1413 154 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 5 -16.511 48.392 -5.67 1 61.47 ? C1 EDO 1205 AAA 1 
HETATM 2 O O1 EDO . . . F 5 -15.369 48.17 -4.838 1 67.4 ? O1 EDO 1205 AAA 1 
HETATM 3 C C2 EDO . . . F 5 -17.647 49.052 -4.979 1 63.69 ? C2 EDO 1205 AAA 1 
HETATM 4 O O2 EDO . . . F 5 -18.678 49.279 -5.9 1 67.8 ? O2 EDO 1205 AAA 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#