data_7Z9V # _model_server_result.job_id CceW-L6L5wDrQ99OURVCYw _model_server_result.datetime_utc '2024-11-25 15:45:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z9v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":804}' # _entry.id 7Z9V # _exptl.entry_id 7Z9V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 104.105 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3~{S},4~{R})-oxolane-3,4-diol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z9V _cell.length_a 50.818 _cell.length_b 68.691 _cell.length_c 116.954 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z9V _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -50.818 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'C4 H8 O3' _chem_comp.formula_weight 104.105 _chem_comp.id IJ8 _chem_comp.mon_nstd_flag . _chem_comp.name (3~{S},4~{R})-oxolane-3,4-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 IJ8 sing 161 n n C03 C02 IJ8 sing 162 n n C03 O04 IJ8 sing 163 n n C02 C06 IJ8 sing 164 n n O04 C05 IJ8 sing 165 n n C05 C06 IJ8 sing 166 n n C06 O07 IJ8 sing 167 n n C02 H1 IJ8 sing 168 n n C03 H2 IJ8 sing 169 n n C03 H3 IJ8 sing 170 n n C05 H4 IJ8 sing 171 n n C05 H5 IJ8 sing 172 n n C06 H6 IJ8 sing 173 n n O01 H7 IJ8 sing 174 n n O07 H8 IJ8 sing 175 n n # _atom_sites.entry_id 7Z9V _atom_sites.fract_transf_matrix[1][1] 0.019678 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014558 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00855 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GZ6 A 1 801 801 GZ6 GZ6 . C 2 GZ6 A 1 802 802 GZ6 GZ6 . D 3 IJ8 A 1 803 1 IJ8 LIG . E 3 IJ8 A 1 804 4 IJ8 LIG . F 2 GZ6 A 1 805 172 GZ6 GZ6 . G 4 HOH A 1 901 92 HOH HOH . G 4 HOH A 2 902 105 HOH HOH . G 4 HOH A 3 903 30 HOH HOH . G 4 HOH A 4 904 33 HOH HOH . G 4 HOH A 5 905 46 HOH HOH . G 4 HOH A 6 906 69 HOH HOH . G 4 HOH A 7 907 25 HOH HOH . G 4 HOH A 8 908 137 HOH HOH . G 4 HOH A 9 909 2 HOH HOH . G 4 HOH A 10 910 8 HOH HOH . G 4 HOH A 11 911 58 HOH HOH . G 4 HOH A 12 912 42 HOH HOH . G 4 HOH A 13 913 44 HOH HOH . G 4 HOH A 14 914 39 HOH HOH . G 4 HOH A 15 915 121 HOH HOH . G 4 HOH A 16 916 56 HOH HOH . G 4 HOH A 17 917 103 HOH HOH . G 4 HOH A 18 918 61 HOH HOH . G 4 HOH A 19 919 19 HOH HOH . G 4 HOH A 20 920 32 HOH HOH . G 4 HOH A 21 921 43 HOH HOH . G 4 HOH A 22 922 138 HOH HOH . G 4 HOH A 23 923 5 HOH HOH . G 4 HOH A 24 924 28 HOH HOH . G 4 HOH A 25 925 41 HOH HOH . G 4 HOH A 26 926 111 HOH HOH . G 4 HOH A 27 927 98 HOH HOH . G 4 HOH A 28 928 45 HOH HOH . G 4 HOH A 29 929 16 HOH HOH . G 4 HOH A 30 930 129 HOH HOH . G 4 HOH A 31 931 139 HOH HOH . G 4 HOH A 32 932 73 HOH HOH . G 4 HOH A 33 933 4 HOH HOH . G 4 HOH A 34 934 37 HOH HOH . G 4 HOH A 35 935 47 HOH HOH . G 4 HOH A 36 936 66 HOH HOH . G 4 HOH A 37 937 100 HOH HOH . G 4 HOH A 38 938 27 HOH HOH . G 4 HOH A 39 939 59 HOH HOH . G 4 HOH A 40 940 51 HOH HOH . G 4 HOH A 41 941 54 HOH HOH . G 4 HOH A 42 942 104 HOH HOH . G 4 HOH A 43 943 67 HOH HOH . G 4 HOH A 44 944 29 HOH HOH . G 4 HOH A 45 945 31 HOH HOH . G 4 HOH A 46 946 13 HOH HOH . G 4 HOH A 47 947 20 HOH HOH . G 4 HOH A 48 948 24 HOH HOH . G 4 HOH A 49 949 1 HOH HOH . G 4 HOH A 50 950 68 HOH HOH . G 4 HOH A 51 951 152 HOH HOH . G 4 HOH A 52 952 18 HOH HOH . G 4 HOH A 53 953 6 HOH HOH . G 4 HOH A 54 954 75 HOH HOH . G 4 HOH A 55 955 17 HOH HOH . G 4 HOH A 56 956 52 HOH HOH . G 4 HOH A 57 957 9 HOH HOH . G 4 HOH A 58 958 82 HOH HOH . G 4 HOH A 59 959 55 HOH HOH . G 4 HOH A 60 960 15 HOH HOH . G 4 HOH A 61 961 162 HOH HOH . G 4 HOH A 62 962 91 HOH HOH . G 4 HOH A 63 963 48 HOH HOH . G 4 HOH A 64 964 26 HOH HOH . G 4 HOH A 65 965 21 HOH HOH . G 4 HOH A 66 966 23 HOH HOH . G 4 HOH A 67 967 64 HOH HOH . G 4 HOH A 68 968 171 HOH HOH . G 4 HOH A 69 969 60 HOH HOH . G 4 HOH A 70 970 110 HOH HOH . G 4 HOH A 71 971 50 HOH HOH . G 4 HOH A 72 972 34 HOH HOH . G 4 HOH A 73 973 40 HOH HOH . G 4 HOH A 74 974 120 HOH HOH . G 4 HOH A 75 975 35 HOH HOH . G 4 HOH A 76 976 36 HOH HOH . G 4 HOH A 77 977 14 HOH HOH . G 4 HOH A 78 978 22 HOH HOH . G 4 HOH A 79 979 38 HOH HOH . G 4 HOH A 80 980 78 HOH HOH . G 4 HOH A 81 981 12 HOH HOH . G 4 HOH A 82 982 87 HOH HOH . G 4 HOH A 83 983 3 HOH HOH . G 4 HOH A 84 984 72 HOH HOH . G 4 HOH A 85 985 10 HOH HOH . G 4 HOH A 86 986 131 HOH HOH . G 4 HOH A 87 987 7 HOH HOH . G 4 HOH A 88 988 80 HOH HOH . G 4 HOH A 89 989 161 HOH HOH . G 4 HOH A 90 990 170 HOH HOH . G 4 HOH A 91 991 53 HOH HOH . G 4 HOH A 92 992 136 HOH HOH . G 4 HOH A 93 993 125 HOH HOH . G 4 HOH A 94 994 163 HOH HOH . G 4 HOH A 95 995 134 HOH HOH . G 4 HOH A 96 996 115 HOH HOH . G 4 HOH A 97 997 86 HOH HOH . G 4 HOH A 98 998 63 HOH HOH . G 4 HOH A 99 999 167 HOH HOH . G 4 HOH A 100 1000 148 HOH HOH . G 4 HOH A 101 1001 112 HOH HOH . G 4 HOH A 102 1002 96 HOH HOH . G 4 HOH A 103 1003 108 HOH HOH . G 4 HOH A 104 1004 143 HOH HOH . G 4 HOH A 105 1005 79 HOH HOH . G 4 HOH A 106 1006 93 HOH HOH . G 4 HOH A 107 1007 70 HOH HOH . G 4 HOH A 108 1008 165 HOH HOH . G 4 HOH A 109 1009 107 HOH HOH . G 4 HOH A 110 1010 168 HOH HOH . G 4 HOH A 111 1011 89 HOH HOH . G 4 HOH A 112 1012 57 HOH HOH . G 4 HOH A 113 1013 62 HOH HOH . G 4 HOH A 114 1014 102 HOH HOH . G 4 HOH A 115 1015 101 HOH HOH . G 4 HOH A 116 1016 76 HOH HOH . G 4 HOH A 117 1017 154 HOH HOH . G 4 HOH A 118 1018 156 HOH HOH . G 4 HOH A 119 1019 169 HOH HOH . G 4 HOH A 120 1020 99 HOH HOH . G 4 HOH A 121 1021 157 HOH HOH . G 4 HOH A 122 1022 106 HOH HOH . G 4 HOH A 123 1023 95 HOH HOH . G 4 HOH A 124 1024 128 HOH HOH . G 4 HOH A 125 1025 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 IJ8 . . . E 3 -18.035 -19.197 -16.482 1 41.24 ? C02 IJ8 804 A 1 HETATM 2 C C03 IJ8 . . . E 3 -18.029 -18.173 -15.276 1 42.52 ? C03 IJ8 804 A 1 HETATM 3 C C05 IJ8 . . . E 3 -18.793 -17.033 -17.209 1 38.82 ? C05 IJ8 804 A 1 HETATM 4 C C06 IJ8 . . . E 3 -18.121 -18.324 -17.749 1 39.57 ? C06 IJ8 804 A 1 HETATM 5 O O01 IJ8 . . . E 3 -19.183 -19.991 -16.488 1 40.58 ? O01 IJ8 804 A 1 HETATM 6 O O04 IJ8 . . . E 3 -18.666 -16.981 -15.742 1 45 ? O04 IJ8 804 A 1 HETATM 7 O O07 IJ8 . . . E 3 -18.997 -19.045 -18.606 1 43.54 ? O07 IJ8 804 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #