data_7ZAB # _model_server_result.job_id 2fMlGQ-bvqghRC6Zt0G2jA _model_server_result.datetime_utc '2024-10-20 01:33:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zab # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1006}' # _entry.id 7ZAB # _exptl.entry_id 7ZAB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZAB _cell.length_a 97.842 _cell.length_b 97.842 _cell.length_c 82.508 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZAB _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_564 x,-y+1,-z-1/2 1 0 0 0 -1 0 0 0 -1 0 97.842 -41.254 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 96 _struct_conn.ptnr1_auth_asym_id AAA _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 238 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 107 _struct_conn.ptnr2_auth_asym_id AAA _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 249 _struct_conn.ptnr2_symmetry 6_564 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.327 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 147 n n C1 C2 GOL sing 148 n n C1 H11 GOL sing 149 n n C1 H12 GOL sing 150 n n O1 HO1 GOL sing 151 n n C2 O2 GOL sing 152 n n C2 C3 GOL sing 153 n n C2 H2 GOL sing 154 n n O2 HO2 GOL sing 155 n n C3 O3 GOL sing 156 n n C3 H31 GOL sing 157 n n C3 H32 GOL sing 158 n n O3 HO3 GOL sing 159 n n # _atom_sites.entry_id 7ZAB _atom_sites.fract_transf_matrix[1][1] 0.010221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01212 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD AAA 1 1001 1001 IOD IOD . C 3 CL AAA 1 1002 1002 CL CL . D 3 CL AAA 1 1003 1003 CL CL . E 3 CL AAA 1 1004 1004 CL CL . F 4 LI AAA 1 1005 1051 LI LI . G 5 GOL AAA 1 1006 1101 GOL GOL . H 6 MPD AAA 1 1007 1201 MPD MPD . I 7 EDO AAA 1 1008 1301 EDO EDO . J 7 EDO AAA 1 1009 1302 EDO EDO . K 7 EDO AAA 1 1010 1303 EDO EDO . L 7 EDO AAA 1 1011 1304 EDO EDO . M 7 EDO AAA 1 1012 1305 EDO EDO . N 7 EDO AAA 1 1013 1306 EDO EDO . O 8 DMS AAA 1 1014 1401 DMS DMS . P 9 HOH AAA 1 1101 2011 HOH HOH . P 9 HOH AAA 2 1102 2010 HOH HOH . P 9 HOH AAA 3 1103 2006 HOH HOH . P 9 HOH AAA 4 1104 2005 HOH HOH . P 9 HOH AAA 5 1105 2009 HOH HOH . P 9 HOH AAA 6 1106 2003 HOH HOH . P 9 HOH AAA 7 1107 2012 HOH HOH . P 9 HOH AAA 8 1108 2001 HOH HOH . P 9 HOH AAA 9 1109 2008 HOH HOH . P 9 HOH AAA 10 1110 2004 HOH HOH . P 9 HOH AAA 11 1111 2013 HOH HOH . P 9 HOH AAA 12 1112 2002 HOH HOH . P 9 HOH AAA 13 1113 2007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 5 10.214 53.404 -5.498 1 102.31 0 C1 GOL 1006 AAA 1 HETATM 2 O O1 GOL . . . G 5 9.461 52.623 -4.576 1 135.82 0 O1 GOL 1006 AAA 1 HETATM 3 C C2 GOL . . . G 5 9.69 53.333 -6.922 1 105.7 0 C2 GOL 1006 AAA 1 HETATM 4 O O2 GOL . . . G 5 8.468 52.607 -7.063 1 99.41 0 O2 GOL 1006 AAA 1 HETATM 5 C C3 GOL . . . G 5 9.557 54.701 -7.551 1 127.38 0 C3 GOL 1006 AAA 1 HETATM 6 O O3 GOL . . . G 5 10.703 55.496 -7.257 1 158.47 0 O3 GOL 1006 AAA 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #