data_7ZAM # _model_server_result.job_id rolfE52ywmWQmZG5O_dZ-g _model_server_result.datetime_utc '2024-10-19 13:18:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zam # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":305}' # _entry.id 7ZAM # _exptl.entry_id 7ZAM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 15 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZAM _cell.length_a 138.459 _cell.length_b 138.701 _cell.length_c 82.337 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZAM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 AAA CYS 238 1_555 B SG CYS 107 BBB CYS 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? disulf ? disulf2 A SG CYS 107 AAA CYS 249 1_555 B SG CYS 96 BBB CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7ZAM _atom_sites.fract_transf_matrix[1][1] 0.007222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012145 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD AAA 1 1001 1001 IOD IOD . D 3 EDO AAA 1 1002 1201 EDO EDO . E 3 EDO AAA 1 1003 1202 EDO EDO . F 3 EDO AAA 1 1004 1203 EDO EDO . G 3 EDO AAA 1 1005 1204 EDO EDO . H 3 EDO AAA 1 1006 1206 EDO EDO . I 3 EDO AAA 1 1007 1208 EDO EDO . J 3 EDO AAA 1 1008 1210 EDO EDO . K 3 EDO AAA 1 1009 1211 EDO EDO . L 3 EDO AAA 1 1010 1213 EDO EDO . M 3 EDO AAA 1 1011 1214 EDO EDO . N 4 GOL AAA 1 1012 1301 GOL GOL . O 2 IOD BBB 1 301 1002 IOD IOD . P 5 SO4 BBB 1 302 1003 SO4 SO4 . Q 5 SO4 BBB 1 303 1004 SO4 SO4 . R 3 EDO BBB 1 304 1205 EDO EDO . S 3 EDO BBB 1 305 1207 EDO EDO . T 3 EDO BBB 1 306 1209 EDO EDO . U 3 EDO BBB 1 307 1212 EDO EDO . V 3 EDO BBB 1 308 1215 EDO EDO . W 6 HOH AAA 1 1101 2025 HOH HOH . W 6 HOH AAA 2 1102 2006 HOH HOH . W 6 HOH AAA 3 1103 2016 HOH HOH . W 6 HOH AAA 4 1104 2023 HOH HOH . W 6 HOH AAA 5 1105 2003 HOH HOH . W 6 HOH AAA 6 1106 2001 HOH HOH . W 6 HOH AAA 7 1107 2012 HOH HOH . W 6 HOH AAA 8 1108 2018 HOH HOH . W 6 HOH AAA 9 1109 2014 HOH HOH . W 6 HOH AAA 10 1110 2021 HOH HOH . W 6 HOH AAA 11 1111 2019 HOH HOH . W 6 HOH AAA 12 1112 2004 HOH HOH . X 6 HOH BBB 1 401 2027 HOH HOH . X 6 HOH BBB 2 402 2009 HOH HOH . X 6 HOH BBB 3 403 2015 HOH HOH . X 6 HOH BBB 4 404 2029 HOH HOH . X 6 HOH BBB 5 405 2008 HOH HOH . X 6 HOH BBB 6 406 2028 HOH HOH . X 6 HOH BBB 7 407 2017 HOH HOH . X 6 HOH BBB 8 408 2007 HOH HOH . X 6 HOH BBB 9 409 2024 HOH HOH . X 6 HOH BBB 10 410 2010 HOH HOH . X 6 HOH BBB 11 411 2026 HOH HOH . X 6 HOH BBB 12 412 2005 HOH HOH . X 6 HOH BBB 13 413 2011 HOH HOH . X 6 HOH BBB 14 414 2020 HOH HOH . X 6 HOH BBB 15 415 2013 HOH HOH . X 6 HOH BBB 16 416 2022 HOH HOH . X 6 HOH BBB 17 417 2002 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . S 3 41.327 32.289 -60.147 1 97.26 0 C1 EDO 305 BBB 1 HETATM 2 O O1 EDO . . . S 3 40.871 31.511 -61.24 1 108.41 0 O1 EDO 305 BBB 1 HETATM 3 C C2 EDO . . . S 3 40.224 32.529 -59.201 1 99.7 0 C2 EDO 305 BBB 1 HETATM 4 O O2 EDO . . . S 3 39.9 33.893 -59.201 1 110.88 0 O2 EDO 305 BBB 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #