data_7ZAQ # _model_server_result.job_id D5AkAmlskg-hDa1NMn4W8Q _model_server_result.datetime_utc '2024-11-22 06:56:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zaq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7ZAQ # _exptl.entry_id 7ZAQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZAQ _cell.length_a 37.732 _cell.length_b 43.555 _cell.length_c 79.628 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZAQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 146 n n C1 C2 GOL sing 147 n n C1 H11 GOL sing 148 n n C1 H12 GOL sing 149 n n O1 HO1 GOL sing 150 n n C2 O2 GOL sing 151 n n C2 C3 GOL sing 152 n n C2 H2 GOL sing 153 n n O2 HO2 GOL sing 154 n n C3 O3 GOL sing 155 n n C3 H31 GOL sing 156 n n C3 H32 GOL sing 157 n n O3 HO3 GOL sing 158 n n # _atom_sites.entry_id 7ZAQ _atom_sites.fract_transf_matrix[1][1] 0.026503 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022959 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012558 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 1 GOL GOL . C 2 GOL A 1 202 2 GOL GOL . D 2 GOL A 1 203 3 GOL GOL . E 3 3Z7 A 1 204 1 3Z7 DRG . F 4 HOH A 1 301 193 HOH HOH . F 4 HOH A 2 302 164 HOH HOH . F 4 HOH A 3 303 42 HOH HOH . F 4 HOH A 4 304 67 HOH HOH . F 4 HOH A 5 305 83 HOH HOH . F 4 HOH A 6 306 195 HOH HOH . F 4 HOH A 7 307 172 HOH HOH . F 4 HOH A 8 308 121 HOH HOH . F 4 HOH A 9 309 201 HOH HOH . F 4 HOH A 10 310 128 HOH HOH . F 4 HOH A 11 311 136 HOH HOH . F 4 HOH A 12 312 199 HOH HOH . F 4 HOH A 13 313 192 HOH HOH . F 4 HOH A 14 314 25 HOH HOH . F 4 HOH A 15 315 210 HOH HOH . F 4 HOH A 16 316 185 HOH HOH . F 4 HOH A 17 317 27 HOH HOH . F 4 HOH A 18 318 82 HOH HOH . F 4 HOH A 19 319 55 HOH HOH . F 4 HOH A 20 320 180 HOH HOH . F 4 HOH A 21 321 14 HOH HOH . F 4 HOH A 22 322 20 HOH HOH . F 4 HOH A 23 323 26 HOH HOH . F 4 HOH A 24 324 22 HOH HOH . F 4 HOH A 25 325 90 HOH HOH . F 4 HOH A 26 326 187 HOH HOH . F 4 HOH A 27 327 139 HOH HOH . F 4 HOH A 28 328 8 HOH HOH . F 4 HOH A 29 329 17 HOH HOH . F 4 HOH A 30 330 71 HOH HOH . F 4 HOH A 31 331 108 HOH HOH . F 4 HOH A 32 332 49 HOH HOH . F 4 HOH A 33 333 56 HOH HOH . F 4 HOH A 34 334 148 HOH HOH . F 4 HOH A 35 335 32 HOH HOH . F 4 HOH A 36 336 179 HOH HOH . F 4 HOH A 37 337 92 HOH HOH . F 4 HOH A 38 338 11 HOH HOH . F 4 HOH A 39 339 103 HOH HOH . F 4 HOH A 40 340 163 HOH HOH . F 4 HOH A 41 341 142 HOH HOH . F 4 HOH A 42 342 12 HOH HOH . F 4 HOH A 43 343 93 HOH HOH . F 4 HOH A 44 344 33 HOH HOH . F 4 HOH A 45 345 176 HOH HOH . F 4 HOH A 46 346 13 HOH HOH . F 4 HOH A 47 347 2 HOH HOH . F 4 HOH A 48 348 70 HOH HOH . F 4 HOH A 49 349 6 HOH HOH . F 4 HOH A 50 350 109 HOH HOH . F 4 HOH A 51 351 69 HOH HOH . F 4 HOH A 52 352 154 HOH HOH . F 4 HOH A 53 353 24 HOH HOH . F 4 HOH A 54 354 95 HOH HOH . F 4 HOH A 55 355 43 HOH HOH . F 4 HOH A 56 356 1 HOH HOH . F 4 HOH A 57 357 204 HOH HOH . F 4 HOH A 58 358 35 HOH HOH . F 4 HOH A 59 359 171 HOH HOH . F 4 HOH A 60 360 31 HOH HOH . F 4 HOH A 61 361 208 HOH HOH . F 4 HOH A 62 362 19 HOH HOH . F 4 HOH A 63 363 137 HOH HOH . F 4 HOH A 64 364 207 HOH HOH . F 4 HOH A 65 365 5 HOH HOH . F 4 HOH A 66 366 21 HOH HOH . F 4 HOH A 67 367 36 HOH HOH . F 4 HOH A 68 368 23 HOH HOH . F 4 HOH A 69 369 167 HOH HOH . F 4 HOH A 70 370 178 HOH HOH . F 4 HOH A 71 371 94 HOH HOH . F 4 HOH A 72 372 122 HOH HOH . F 4 HOH A 73 373 66 HOH HOH . F 4 HOH A 74 374 114 HOH HOH . F 4 HOH A 75 375 63 HOH HOH . F 4 HOH A 76 376 41 HOH HOH . F 4 HOH A 77 377 197 HOH HOH . F 4 HOH A 78 378 140 HOH HOH . F 4 HOH A 79 379 76 HOH HOH . F 4 HOH A 80 380 7 HOH HOH . F 4 HOH A 81 381 68 HOH HOH . F 4 HOH A 82 382 3 HOH HOH . F 4 HOH A 83 383 45 HOH HOH . F 4 HOH A 84 384 86 HOH HOH . F 4 HOH A 85 385 18 HOH HOH . F 4 HOH A 86 386 65 HOH HOH . F 4 HOH A 87 387 202 HOH HOH . F 4 HOH A 88 388 150 HOH HOH . F 4 HOH A 89 389 39 HOH HOH . F 4 HOH A 90 390 9 HOH HOH . F 4 HOH A 91 391 198 HOH HOH . F 4 HOH A 92 392 174 HOH HOH . F 4 HOH A 93 393 153 HOH HOH . F 4 HOH A 94 394 203 HOH HOH . F 4 HOH A 95 395 162 HOH HOH . F 4 HOH A 96 396 28 HOH HOH . F 4 HOH A 97 397 115 HOH HOH . F 4 HOH A 98 398 48 HOH HOH . F 4 HOH A 99 399 113 HOH HOH . F 4 HOH A 100 400 206 HOH HOH . F 4 HOH A 101 401 74 HOH HOH . F 4 HOH A 102 402 101 HOH HOH . F 4 HOH A 103 403 15 HOH HOH . F 4 HOH A 104 404 181 HOH HOH . F 4 HOH A 105 405 211 HOH HOH . F 4 HOH A 106 406 61 HOH HOH . F 4 HOH A 107 407 75 HOH HOH . F 4 HOH A 108 408 30 HOH HOH . F 4 HOH A 109 409 205 HOH HOH . F 4 HOH A 110 410 132 HOH HOH . F 4 HOH A 111 411 209 HOH HOH . F 4 HOH A 112 412 149 HOH HOH . F 4 HOH A 113 413 189 HOH HOH . F 4 HOH A 114 414 29 HOH HOH . F 4 HOH A 115 415 84 HOH HOH . F 4 HOH A 116 416 78 HOH HOH . F 4 HOH A 117 417 138 HOH HOH . F 4 HOH A 118 418 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 -7.322 9.677 -20.896 1 33.04 0 C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . D 2 -7.816 10.105 -22.161 1 27.63 0 O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . D 2 -6.261 10.65 -20.424 1 36.66 0 C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . D 2 -6.02 10.47 -19.033 1 45.38 0 O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . D 2 -4.964 10.542 -21.2 1 39.71 0 C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . D 2 -4.51 11.815 -21.656 1 47.93 0 O3 GOL 203 A 1 HETATM 7 H H11 GOL . . . D 2 -6.935 8.778 -20.98 1 32.4 0 H11 GOL 203 A 1 HETATM 8 H H12 GOL . . . D 2 -8.062 9.646 -20.242 1 32.45 0 H12 GOL 203 A 1 HETATM 9 H HO1 GOL . . . D 2 -8.404 9.565 -22.398 0 27.21 0 HO1 GOL 203 A 1 HETATM 10 H H2 GOL . . . D 2 -6.613 11.562 -20.556 1 38.03 0 H2 GOL 203 A 1 HETATM 11 H HO2 GOL . . . D 2 -5.195 10.381 -18.906 0 44.98 0 HO2 GOL 203 A 1 HETATM 12 H H31 GOL . . . D 2 -5.098 9.949 -21.976 1 40.66 0 H31 GOL 203 A 1 HETATM 13 H H32 GOL . . . D 2 -4.272 10.14 -20.62 1 40.75 0 H32 GOL 203 A 1 HETATM 14 H HO3 GOL . . . D 2 -3.681 11.757 -21.824 1 45.21 0 HO3 GOL 203 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #