data_7ZE6 # _model_server_result.job_id m5irWelkNC-ad8EBt75SKw _model_server_result.datetime_utc '2024-12-04 18:58:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ze6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7ZE6 # _exptl.entry_id 7ZE6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZE6 _cell.length_a 37.589 _cell.length_b 42.962 _cell.length_c 78.767 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZE6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 147 n n C1 C2 GOL sing 148 n n C1 H11 GOL sing 149 n n C1 H12 GOL sing 150 n n O1 HO1 GOL sing 151 n n C2 O2 GOL sing 152 n n C2 C3 GOL sing 153 n n C2 H2 GOL sing 154 n n O2 HO2 GOL sing 155 n n C3 O3 GOL sing 156 n n C3 H31 GOL sing 157 n n C3 H32 GOL sing 158 n n O3 HO3 GOL sing 159 n n # _atom_sites.entry_id 7ZE6 _atom_sites.fract_transf_matrix[1][1] 0.026604 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023276 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012696 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 1 GOL GOL . C 3 1P8 A 1 202 1 1P8 DRG . D 4 HOH A 1 301 83 HOH HOH . D 4 HOH A 2 302 99 HOH HOH . D 4 HOH A 3 303 68 HOH HOH . D 4 HOH A 4 304 145 HOH HOH . D 4 HOH A 5 305 89 HOH HOH . D 4 HOH A 6 306 43 HOH HOH . D 4 HOH A 7 307 106 HOH HOH . D 4 HOH A 8 308 23 HOH HOH . D 4 HOH A 9 309 59 HOH HOH . D 4 HOH A 10 310 84 HOH HOH . D 4 HOH A 11 311 116 HOH HOH . D 4 HOH A 12 312 149 HOH HOH . D 4 HOH A 13 313 58 HOH HOH . D 4 HOH A 14 314 142 HOH HOH . D 4 HOH A 15 315 33 HOH HOH . D 4 HOH A 16 316 47 HOH HOH . D 4 HOH A 17 317 94 HOH HOH . D 4 HOH A 18 318 12 HOH HOH . D 4 HOH A 19 319 133 HOH HOH . D 4 HOH A 20 320 44 HOH HOH . D 4 HOH A 21 321 141 HOH HOH . D 4 HOH A 22 322 132 HOH HOH . D 4 HOH A 23 323 69 HOH HOH . D 4 HOH A 24 324 48 HOH HOH . D 4 HOH A 25 325 28 HOH HOH . D 4 HOH A 26 326 21 HOH HOH . D 4 HOH A 27 327 70 HOH HOH . D 4 HOH A 28 328 19 HOH HOH . D 4 HOH A 29 329 8 HOH HOH . D 4 HOH A 30 330 35 HOH HOH . D 4 HOH A 31 331 6 HOH HOH . D 4 HOH A 32 332 16 HOH HOH . D 4 HOH A 33 333 52 HOH HOH . D 4 HOH A 34 334 22 HOH HOH . D 4 HOH A 35 335 112 HOH HOH . D 4 HOH A 36 336 88 HOH HOH . D 4 HOH A 37 337 9 HOH HOH . D 4 HOH A 38 338 86 HOH HOH . D 4 HOH A 39 339 46 HOH HOH . D 4 HOH A 40 340 42 HOH HOH . D 4 HOH A 41 341 143 HOH HOH . D 4 HOH A 42 342 117 HOH HOH . D 4 HOH A 43 343 49 HOH HOH . D 4 HOH A 44 344 45 HOH HOH . D 4 HOH A 45 345 120 HOH HOH . D 4 HOH A 46 346 74 HOH HOH . D 4 HOH A 47 347 113 HOH HOH . D 4 HOH A 48 348 40 HOH HOH . D 4 HOH A 49 349 15 HOH HOH . D 4 HOH A 50 350 107 HOH HOH . D 4 HOH A 51 351 90 HOH HOH . D 4 HOH A 52 352 146 HOH HOH . D 4 HOH A 53 353 37 HOH HOH . D 4 HOH A 54 354 135 HOH HOH . D 4 HOH A 55 355 138 HOH HOH . D 4 HOH A 56 356 65 HOH HOH . D 4 HOH A 57 357 10 HOH HOH . D 4 HOH A 58 358 57 HOH HOH . D 4 HOH A 59 359 11 HOH HOH . D 4 HOH A 60 360 53 HOH HOH . D 4 HOH A 61 361 131 HOH HOH . D 4 HOH A 62 362 140 HOH HOH . D 4 HOH A 63 363 79 HOH HOH . D 4 HOH A 64 364 4 HOH HOH . D 4 HOH A 65 365 17 HOH HOH . D 4 HOH A 66 366 29 HOH HOH . D 4 HOH A 67 367 130 HOH HOH . D 4 HOH A 68 368 24 HOH HOH . D 4 HOH A 69 369 137 HOH HOH . D 4 HOH A 70 370 7 HOH HOH . D 4 HOH A 71 371 100 HOH HOH . D 4 HOH A 72 372 103 HOH HOH . D 4 HOH A 73 373 34 HOH HOH . D 4 HOH A 74 374 20 HOH HOH . D 4 HOH A 75 375 1 HOH HOH . D 4 HOH A 76 376 67 HOH HOH . D 4 HOH A 77 377 3 HOH HOH . D 4 HOH A 78 378 56 HOH HOH . D 4 HOH A 79 379 76 HOH HOH . D 4 HOH A 80 380 5 HOH HOH . D 4 HOH A 81 381 109 HOH HOH . D 4 HOH A 82 382 81 HOH HOH . D 4 HOH A 83 383 32 HOH HOH . D 4 HOH A 84 384 118 HOH HOH . D 4 HOH A 85 385 54 HOH HOH . D 4 HOH A 86 386 27 HOH HOH . D 4 HOH A 87 387 110 HOH HOH . D 4 HOH A 88 388 31 HOH HOH . D 4 HOH A 89 389 97 HOH HOH . D 4 HOH A 90 390 129 HOH HOH . D 4 HOH A 91 391 36 HOH HOH . D 4 HOH A 92 392 30 HOH HOH . D 4 HOH A 93 393 80 HOH HOH . D 4 HOH A 94 394 38 HOH HOH . D 4 HOH A 95 395 55 HOH HOH . D 4 HOH A 96 396 2 HOH HOH . D 4 HOH A 97 397 119 HOH HOH . D 4 HOH A 98 398 75 HOH HOH . D 4 HOH A 99 399 136 HOH HOH . D 4 HOH A 100 400 85 HOH HOH . D 4 HOH A 101 401 139 HOH HOH . D 4 HOH A 102 402 39 HOH HOH . D 4 HOH A 103 403 18 HOH HOH . D 4 HOH A 104 404 92 HOH HOH . D 4 HOH A 105 405 41 HOH HOH . D 4 HOH A 106 406 73 HOH HOH . D 4 HOH A 107 407 144 HOH HOH . D 4 HOH A 108 408 82 HOH HOH . D 4 HOH A 109 409 125 HOH HOH . D 4 HOH A 110 410 87 HOH HOH . D 4 HOH A 111 411 101 HOH HOH . D 4 HOH A 112 412 62 HOH HOH . D 4 HOH A 113 413 127 HOH HOH . D 4 HOH A 114 414 13 HOH HOH . D 4 HOH A 115 415 78 HOH HOH . D 4 HOH A 116 416 64 HOH HOH . D 4 HOH A 117 417 104 HOH HOH . D 4 HOH A 118 418 63 HOH HOH . D 4 HOH A 119 419 51 HOH HOH . D 4 HOH A 120 420 111 HOH HOH . D 4 HOH A 121 421 61 HOH HOH . D 4 HOH A 122 422 77 HOH HOH . D 4 HOH A 123 423 121 HOH HOH . D 4 HOH A 124 424 60 HOH HOH . D 4 HOH A 125 425 122 HOH HOH . D 4 HOH A 126 426 98 HOH HOH . D 4 HOH A 127 427 115 HOH HOH . D 4 HOH A 128 428 26 HOH HOH . D 4 HOH A 129 429 105 HOH HOH . D 4 HOH A 130 430 95 HOH HOH . D 4 HOH A 131 431 50 HOH HOH . D 4 HOH A 132 432 126 HOH HOH . D 4 HOH A 133 433 91 HOH HOH . D 4 HOH A 134 434 25 HOH HOH . D 4 HOH A 135 435 96 HOH HOH . D 4 HOH A 136 436 108 HOH HOH . D 4 HOH A 137 437 147 HOH HOH . D 4 HOH A 138 438 71 HOH HOH . D 4 HOH A 139 439 123 HOH HOH . D 4 HOH A 140 440 124 HOH HOH . D 4 HOH A 141 441 148 HOH HOH . D 4 HOH A 142 442 102 HOH HOH . D 4 HOH A 143 443 66 HOH HOH . D 4 HOH A 144 444 128 HOH HOH . D 4 HOH A 145 445 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -24.043 -2.397 -5.609 1 24.66 0 C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . B 2 -24.6 -3.247 -6.603 1 21.97 0 O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . B 2 -23.038 -1.432 -6.193 1 22.82 0 C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . B 2 -21.942 -2.139 -6.814 1 17.65 0 O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . B 2 -22.51 -0.53 -5.099 1 25.47 0 C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . B 2 -21.423 0.29 -5.526 1 30.2 0 O3 GOL 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #