data_7ZEA # _model_server_result.job_id hwd2jxxgy51k79zqpIgXlg _model_server_result.datetime_utc '2024-12-21 18:38:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zea # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 7ZEA # _exptl.entry_id 7ZEA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 123.152 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description O-benzylhydroxylamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.47 _cell.angle_gamma 90 _cell.entry_id 7ZEA _cell.length_a 87.025 _cell.length_b 104.507 _cell.length_c 87.301 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZEA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F NA NA . A NA 403 1_555 I O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc2 F NA NA . A NA 403 1_555 I O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc3 F NA NA . A NA 403 1_555 J O HOH . B HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc4 F NA NA . A NA 403 1_555 J O HOH . B HOH 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc5 F NA NA . A NA 403 1_555 K O HOH . C HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc6 F NA NA . A NA 403 1_555 K O HOH . C HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? # _chem_comp.formula 'C7 H9 N O' _chem_comp.formula_weight 123.152 _chem_comp.id OBZ _chem_comp.mon_nstd_flag . _chem_comp.name O-benzylhydroxylamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C3 OBZ sing 237 n n C3 C4 OBZ sing 238 n n C4 C9 OBZ doub 239 n y C4 C5 OBZ sing 240 n y C9 C8 OBZ sing 241 n y C8 C7 OBZ doub 242 n y C7 C6 OBZ sing 243 n y C6 C5 OBZ doub 244 n y O2 N1 OBZ sing 245 n n C3 H3 OBZ sing 246 n n C3 H3A OBZ sing 247 n n C9 H9 OBZ sing 248 n n C8 H8 OBZ sing 249 n n C7 H7 OBZ sing 250 n n C6 H6 OBZ sing 251 n n C5 H5 OBZ sing 252 n n N1 HN1 OBZ sing 253 n n N1 HN1A OBZ sing 254 n n # _atom_sites.entry_id 7ZEA _atom_sites.fract_transf_matrix[1][1] 0.011491 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005974 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009569 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 OBZ A 1 401 401 OBZ UNL . E 3 SO4 A 1 402 2 SO4 SO4 . F 4 NA A 1 403 1 NA NA . G 2 OBZ B 1 401 401 OBZ UNL . H 3 SO4 B 1 402 1 SO4 SO4 . I 5 HOH A 1 501 100 HOH HOH . I 5 HOH A 2 502 24 HOH HOH . I 5 HOH A 3 503 4 HOH HOH . I 5 HOH A 4 504 9 HOH HOH . I 5 HOH A 5 505 111 HOH HOH . I 5 HOH A 6 506 58 HOH HOH . I 5 HOH A 7 507 69 HOH HOH . I 5 HOH A 8 508 110 HOH HOH . I 5 HOH A 9 509 7 HOH HOH . I 5 HOH A 10 510 52 HOH HOH . I 5 HOH A 11 511 97 HOH HOH . I 5 HOH A 12 512 6 HOH HOH . I 5 HOH A 13 513 124 HOH HOH . I 5 HOH A 14 514 33 HOH HOH . I 5 HOH A 15 515 107 HOH HOH . I 5 HOH A 16 516 35 HOH HOH . I 5 HOH A 17 517 75 HOH HOH . I 5 HOH A 18 518 84 HOH HOH . I 5 HOH A 19 519 62 HOH HOH . I 5 HOH A 20 520 123 HOH HOH . I 5 HOH A 21 521 51 HOH HOH . I 5 HOH A 22 522 23 HOH HOH . I 5 HOH A 23 523 29 HOH HOH . I 5 HOH A 24 524 79 HOH HOH . I 5 HOH A 25 525 31 HOH HOH . I 5 HOH A 26 526 105 HOH HOH . I 5 HOH A 27 527 47 HOH HOH . I 5 HOH A 28 528 55 HOH HOH . I 5 HOH A 29 529 118 HOH HOH . I 5 HOH A 30 530 99 HOH HOH . I 5 HOH A 31 531 134 HOH HOH . I 5 HOH A 32 532 43 HOH HOH . I 5 HOH A 33 533 76 HOH HOH . I 5 HOH A 34 534 106 HOH HOH . I 5 HOH A 35 535 77 HOH HOH . I 5 HOH A 36 536 39 HOH HOH . I 5 HOH A 37 537 5 HOH HOH . I 5 HOH A 38 538 80 HOH HOH . I 5 HOH A 39 539 67 HOH HOH . I 5 HOH A 40 540 83 HOH HOH . I 5 HOH A 41 541 82 HOH HOH . I 5 HOH A 42 542 89 HOH HOH . I 5 HOH A 43 543 8 HOH HOH . I 5 HOH A 44 544 101 HOH HOH . I 5 HOH A 45 545 81 HOH HOH . I 5 HOH A 46 546 78 HOH HOH . I 5 HOH A 47 547 114 HOH HOH . I 5 HOH A 48 548 126 HOH HOH . J 5 HOH B 1 501 10 HOH HOH . J 5 HOH B 2 502 112 HOH HOH . J 5 HOH B 3 503 61 HOH HOH . J 5 HOH B 4 504 60 HOH HOH . J 5 HOH B 5 505 32 HOH HOH . J 5 HOH B 6 506 45 HOH HOH . J 5 HOH B 7 507 38 HOH HOH . J 5 HOH B 8 508 28 HOH HOH . J 5 HOH B 9 509 91 HOH HOH . J 5 HOH B 10 510 30 HOH HOH . J 5 HOH B 11 511 14 HOH HOH . J 5 HOH B 12 512 109 HOH HOH . J 5 HOH B 13 513 15 HOH HOH . J 5 HOH B 14 514 40 HOH HOH . J 5 HOH B 15 515 87 HOH HOH . J 5 HOH B 16 516 46 HOH HOH . J 5 HOH B 17 517 22 HOH HOH . J 5 HOH B 18 518 25 HOH HOH . J 5 HOH B 19 519 26 HOH HOH . J 5 HOH B 20 520 18 HOH HOH . J 5 HOH B 21 521 57 HOH HOH . J 5 HOH B 22 522 50 HOH HOH . J 5 HOH B 23 523 63 HOH HOH . J 5 HOH B 24 524 125 HOH HOH . J 5 HOH B 25 525 108 HOH HOH . J 5 HOH B 26 526 11 HOH HOH . J 5 HOH B 27 527 13 HOH HOH . J 5 HOH B 28 528 103 HOH HOH . J 5 HOH B 29 529 12 HOH HOH . J 5 HOH B 30 530 66 HOH HOH . J 5 HOH B 31 531 59 HOH HOH . J 5 HOH B 32 532 95 HOH HOH . J 5 HOH B 33 533 41 HOH HOH . J 5 HOH B 34 534 122 HOH HOH . J 5 HOH B 35 535 102 HOH HOH . J 5 HOH B 36 536 127 HOH HOH . J 5 HOH B 37 537 119 HOH HOH . J 5 HOH B 38 538 117 HOH HOH . J 5 HOH B 39 539 36 HOH HOH . J 5 HOH B 40 540 120 HOH HOH . J 5 HOH B 41 541 65 HOH HOH . J 5 HOH B 42 542 94 HOH HOH . J 5 HOH B 43 543 44 HOH HOH . J 5 HOH B 44 544 104 HOH HOH . J 5 HOH B 45 545 17 HOH HOH . J 5 HOH B 46 546 86 HOH HOH . J 5 HOH B 47 547 68 HOH HOH . J 5 HOH B 48 548 85 HOH HOH . J 5 HOH B 49 549 129 HOH HOH . J 5 HOH B 50 550 93 HOH HOH . J 5 HOH B 51 551 48 HOH HOH . J 5 HOH B 52 552 128 HOH HOH . J 5 HOH B 53 553 113 HOH HOH . K 5 HOH C 1 401 34 HOH HOH . K 5 HOH C 2 402 42 HOH HOH . K 5 HOH C 3 403 1 HOH HOH . K 5 HOH C 4 404 53 HOH HOH . K 5 HOH C 5 405 49 HOH HOH . K 5 HOH C 6 406 56 HOH HOH . K 5 HOH C 7 407 71 HOH HOH . K 5 HOH C 8 408 16 HOH HOH . K 5 HOH C 9 409 64 HOH HOH . K 5 HOH C 10 410 130 HOH HOH . K 5 HOH C 11 411 19 HOH HOH . K 5 HOH C 12 412 131 HOH HOH . K 5 HOH C 13 413 20 HOH HOH . K 5 HOH C 14 414 21 HOH HOH . K 5 HOH C 15 415 37 HOH HOH . K 5 HOH C 16 416 2 HOH HOH . K 5 HOH C 17 417 98 HOH HOH . K 5 HOH C 18 418 116 HOH HOH . K 5 HOH C 19 419 96 HOH HOH . K 5 HOH C 20 420 70 HOH HOH . K 5 HOH C 21 421 54 HOH HOH . K 5 HOH C 22 422 88 HOH HOH . K 5 HOH C 23 423 27 HOH HOH . K 5 HOH C 24 424 72 HOH HOH . K 5 HOH C 25 425 132 HOH HOH . K 5 HOH C 26 426 115 HOH HOH . K 5 HOH C 27 427 90 HOH HOH . K 5 HOH C 28 428 92 HOH HOH . K 5 HOH C 29 429 3 HOH HOH . K 5 HOH C 30 430 121 HOH HOH . K 5 HOH C 31 431 74 HOH HOH . K 5 HOH C 32 432 73 HOH HOH . K 5 HOH C 33 433 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 OBZ . . . D 2 22.851 -2.931 6.387 1 95.17 0 O2 OBZ 401 A 1 HETATM 2 C C3 OBZ . . . D 2 23.345 -2.014 5.406 1 91.15 0 C3 OBZ 401 A 1 HETATM 3 C C4 OBZ . . . D 2 23.413 -0.626 5.978 1 86.08 0 C4 OBZ 401 A 1 HETATM 4 C C9 OBZ . . . D 2 23.223 0.476 5.168 1 88.43 0 C9 OBZ 401 A 1 HETATM 5 C C8 OBZ . . . D 2 23.307 1.758 5.693 1 86.07 0 C8 OBZ 401 A 1 HETATM 6 C C7 OBZ . . . D 2 23.567 1.943 7.028 1 83.75 0 C7 OBZ 401 A 1 HETATM 7 C C6 OBZ . . . D 2 23.745 0.853 7.842 1 82.01 0 C6 OBZ 401 A 1 HETATM 8 C C5 OBZ . . . D 2 23.663 -0.428 7.321 1 82.45 0 C5 OBZ 401 A 1 HETATM 9 N N1 OBZ . . . D 2 22.282 -4.056 5.712 1 101.3 0 N1 OBZ 401 A 1 HETATM 10 H H3 OBZ . . . D 2 24.241 -2.302 5.124 1 90.76 0 H3 OBZ 401 A 1 HETATM 11 H H3A OBZ . . . D 2 22.754 -2.023 4.628 1 92.39 0 H3A OBZ 401 A 1 HETATM 12 H H9 OBZ . . . D 2 23.056 0.356 4.245 1 88.48 0 H9 OBZ 401 A 1 HETATM 13 H H8 OBZ . . . D 2 23.18 2.504 5.129 1 86.02 0 H8 OBZ 401 A 1 HETATM 14 H H7 OBZ . . . D 2 23.615 2.816 7.387 1 82.8 0 H7 OBZ 401 A 1 HETATM 15 H H6 OBZ . . . D 2 23.925 0.976 8.761 1 81.58 0 H6 OBZ 401 A 1 HETATM 16 H H5 OBZ . . . D 2 23.804 -1.172 7.886 1 83.4 0 H5 OBZ 401 A 1 HETATM 17 H HN1 OBZ . . . D 2 22.916 -4.376 5.079 1 100.3 0 HN1 OBZ 401 A 1 HETATM 18 H HN1A OBZ . . . D 2 21.463 -3.776 5.32 1 101 0 HN1A OBZ 401 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 360 _model_server_stats.encode_time_ms 47 _model_server_stats.element_count 18 #