data_7ZEQ
#
_model_server_result.job_id            78i6X7I9Pu-MrUO8dHkXlg 
_model_server_result.datetime_utc      '2024-11-26 08:40:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7zeq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":901}' 
#
_entry.id    7ZEQ 
#
_exptl.entry_id    7ZEQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7ZEQ 
_cell.length_a            179.08 
_cell.length_b            98.59 
_cell.length_c            100.92 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ZEQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 237 n n 
C1 H11 MPD sing 238 n n 
C1 H12 MPD sing 239 n n 
C1 H13 MPD sing 240 n n 
C2 O2 MPD sing 241 n n 
C2 CM MPD sing 242 n n 
C2 C3 MPD sing 243 n n 
O2 HO2 MPD sing 244 n n 
CM HM1 MPD sing 245 n n 
CM HM2 MPD sing 246 n n 
CM HM3 MPD sing 247 n n 
C3 C4 MPD sing 248 n n 
C3 H31 MPD sing 249 n n 
C3 H32 MPD sing 250 n n 
C4 O4 MPD sing 251 n n 
C4 C5 MPD sing 252 n n 
C4 H4 MPD sing 253 n n 
O4 HO4 MPD sing 254 n n 
C5 H51 MPD sing 255 n n 
C5 H52 MPD sing 256 n n 
C5 H53 MPD sing 257 n n 
#
_atom_sites.entry_id                     7ZEQ 
_atom_sites.fract_transf_matrix[1][1]    0.005584 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010143 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009909 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MPD X 1 901 801 MPD MPD . 
D 2 MPD Y 1 901 801 MPD MPD . 
E 3 HOH X 1 1001 56 HOH HOH . 
E 3 HOH X 2 1002 172 HOH HOH . 
E 3 HOH X 3 1003 34 HOH HOH . 
E 3 HOH X 4 1004 128 HOH HOH . 
E 3 HOH X 5 1005 180 HOH HOH . 
E 3 HOH X 6 1006 113 HOH HOH . 
E 3 HOH X 7 1007 188 HOH HOH . 
E 3 HOH X 8 1008 146 HOH HOH . 
E 3 HOH X 9 1009 102 HOH HOH . 
E 3 HOH X 10 1010 184 HOH HOH . 
E 3 HOH X 11 1011 91 HOH HOH . 
E 3 HOH X 12 1012 105 HOH HOH . 
E 3 HOH X 13 1013 175 HOH HOH . 
E 3 HOH X 14 1014 162 HOH HOH . 
E 3 HOH X 15 1015 183 HOH HOH . 
E 3 HOH X 16 1016 99 HOH HOH . 
E 3 HOH X 17 1017 152 HOH HOH . 
E 3 HOH X 18 1018 8 HOH HOH . 
E 3 HOH X 19 1019 87 HOH HOH . 
E 3 HOH X 20 1020 17 HOH HOH . 
E 3 HOH X 21 1021 46 HOH HOH . 
E 3 HOH X 22 1022 86 HOH HOH . 
E 3 HOH X 23 1023 112 HOH HOH . 
E 3 HOH X 24 1024 82 HOH HOH . 
E 3 HOH X 25 1025 115 HOH HOH . 
E 3 HOH X 26 1026 40 HOH HOH . 
E 3 HOH X 27 1027 121 HOH HOH . 
E 3 HOH X 28 1028 96 HOH HOH . 
E 3 HOH X 29 1029 25 HOH HOH . 
E 3 HOH X 30 1030 27 HOH HOH . 
E 3 HOH X 31 1031 70 HOH HOH . 
E 3 HOH X 32 1032 167 HOH HOH . 
E 3 HOH X 33 1033 38 HOH HOH . 
E 3 HOH X 34 1034 44 HOH HOH . 
E 3 HOH X 35 1035 114 HOH HOH . 
E 3 HOH X 36 1036 92 HOH HOH . 
E 3 HOH X 37 1037 98 HOH HOH . 
E 3 HOH X 38 1038 154 HOH HOH . 
E 3 HOH X 39 1039 134 HOH HOH . 
E 3 HOH X 40 1040 160 HOH HOH . 
E 3 HOH X 41 1041 141 HOH HOH . 
E 3 HOH X 42 1042 95 HOH HOH . 
E 3 HOH X 43 1043 119 HOH HOH . 
E 3 HOH X 44 1044 89 HOH HOH . 
E 3 HOH X 45 1045 39 HOH HOH . 
E 3 HOH X 46 1046 55 HOH HOH . 
E 3 HOH X 47 1047 182 HOH HOH . 
E 3 HOH X 48 1048 62 HOH HOH . 
E 3 HOH X 49 1049 45 HOH HOH . 
E 3 HOH X 50 1050 97 HOH HOH . 
E 3 HOH X 51 1051 42 HOH HOH . 
E 3 HOH X 52 1052 187 HOH HOH . 
E 3 HOH X 53 1053 149 HOH HOH . 
E 3 HOH X 54 1054 49 HOH HOH . 
E 3 HOH X 55 1055 32 HOH HOH . 
E 3 HOH X 56 1056 126 HOH HOH . 
E 3 HOH X 57 1057 66 HOH HOH . 
E 3 HOH X 58 1058 67 HOH HOH . 
E 3 HOH X 59 1059 178 HOH HOH . 
E 3 HOH X 60 1060 109 HOH HOH . 
E 3 HOH X 61 1061 120 HOH HOH . 
E 3 HOH X 62 1062 153 HOH HOH . 
E 3 HOH X 63 1063 74 HOH HOH . 
E 3 HOH X 64 1064 19 HOH HOH . 
E 3 HOH X 65 1065 117 HOH HOH . 
E 3 HOH X 66 1066 26 HOH HOH . 
E 3 HOH X 67 1067 57 HOH HOH . 
E 3 HOH X 68 1068 101 HOH HOH . 
E 3 HOH X 69 1069 71 HOH HOH . 
E 3 HOH X 70 1070 68 HOH HOH . 
E 3 HOH X 71 1071 107 HOH HOH . 
E 3 HOH X 72 1072 2 HOH HOH . 
E 3 HOH X 73 1073 60 HOH HOH . 
E 3 HOH X 74 1074 176 HOH HOH . 
E 3 HOH X 75 1075 24 HOH HOH . 
E 3 HOH X 76 1076 158 HOH HOH . 
E 3 HOH X 77 1077 147 HOH HOH . 
E 3 HOH X 78 1078 110 HOH HOH . 
E 3 HOH X 79 1079 106 HOH HOH . 
F 3 HOH Y 1 1001 139 HOH HOH . 
F 3 HOH Y 2 1002 51 HOH HOH . 
F 3 HOH Y 3 1003 123 HOH HOH . 
F 3 HOH Y 4 1004 78 HOH HOH . 
F 3 HOH Y 5 1005 143 HOH HOH . 
F 3 HOH Y 6 1006 181 HOH HOH . 
F 3 HOH Y 7 1007 31 HOH HOH . 
F 3 HOH Y 8 1008 90 HOH HOH . 
F 3 HOH Y 9 1009 15 HOH HOH . 
F 3 HOH Y 10 1010 7 HOH HOH . 
F 3 HOH Y 11 1011 9 HOH HOH . 
F 3 HOH Y 12 1012 130 HOH HOH . 
F 3 HOH Y 13 1013 13 HOH HOH . 
F 3 HOH Y 14 1014 127 HOH HOH . 
F 3 HOH Y 15 1015 132 HOH HOH . 
F 3 HOH Y 16 1016 144 HOH HOH . 
F 3 HOH Y 17 1017 129 HOH HOH . 
F 3 HOH Y 18 1018 59 HOH HOH . 
F 3 HOH Y 19 1019 22 HOH HOH . 
F 3 HOH Y 20 1020 14 HOH HOH . 
F 3 HOH Y 21 1021 64 HOH HOH . 
F 3 HOH Y 22 1022 116 HOH HOH . 
F 3 HOH Y 23 1023 81 HOH HOH . 
F 3 HOH Y 24 1024 163 HOH HOH . 
F 3 HOH Y 25 1025 58 HOH HOH . 
F 3 HOH Y 26 1026 133 HOH HOH . 
F 3 HOH Y 27 1027 185 HOH HOH . 
F 3 HOH Y 28 1028 136 HOH HOH . 
F 3 HOH Y 29 1029 118 HOH HOH . 
F 3 HOH Y 30 1030 164 HOH HOH . 
F 3 HOH Y 31 1031 100 HOH HOH . 
F 3 HOH Y 32 1032 80 HOH HOH . 
F 3 HOH Y 33 1033 20 HOH HOH . 
F 3 HOH Y 34 1034 122 HOH HOH . 
F 3 HOH Y 35 1035 77 HOH HOH . 
F 3 HOH Y 36 1036 76 HOH HOH . 
F 3 HOH Y 37 1037 41 HOH HOH . 
F 3 HOH Y 38 1038 23 HOH HOH . 
F 3 HOH Y 39 1039 12 HOH HOH . 
F 3 HOH Y 40 1040 48 HOH HOH . 
F 3 HOH Y 41 1041 10 HOH HOH . 
F 3 HOH Y 42 1042 6 HOH HOH . 
F 3 HOH Y 43 1043 186 HOH HOH . 
F 3 HOH Y 44 1044 28 HOH HOH . 
F 3 HOH Y 45 1045 104 HOH HOH . 
F 3 HOH Y 46 1046 54 HOH HOH . 
F 3 HOH Y 47 1047 94 HOH HOH . 
F 3 HOH Y 48 1048 69 HOH HOH . 
F 3 HOH Y 49 1049 166 HOH HOH . 
F 3 HOH Y 50 1050 165 HOH HOH . 
F 3 HOH Y 51 1051 189 HOH HOH . 
F 3 HOH Y 52 1052 138 HOH HOH . 
F 3 HOH Y 53 1053 155 HOH HOH . 
F 3 HOH Y 54 1054 108 HOH HOH . 
F 3 HOH Y 55 1055 16 HOH HOH . 
F 3 HOH Y 56 1056 63 HOH HOH . 
F 3 HOH Y 57 1057 37 HOH HOH . 
F 3 HOH Y 58 1058 159 HOH HOH . 
F 3 HOH Y 59 1059 151 HOH HOH . 
F 3 HOH Y 60 1060 140 HOH HOH . 
F 3 HOH Y 61 1061 30 HOH HOH . 
F 3 HOH Y 62 1062 53 HOH HOH . 
F 3 HOH Y 63 1063 21 HOH HOH . 
F 3 HOH Y 64 1064 18 HOH HOH . 
F 3 HOH Y 65 1065 131 HOH HOH . 
F 3 HOH Y 66 1066 84 HOH HOH . 
F 3 HOH Y 67 1067 157 HOH HOH . 
F 3 HOH Y 68 1068 52 HOH HOH . 
F 3 HOH Y 69 1069 61 HOH HOH . 
F 3 HOH Y 70 1070 85 HOH HOH . 
F 3 HOH Y 71 1071 174 HOH HOH . 
F 3 HOH Y 72 1072 145 HOH HOH . 
F 3 HOH Y 73 1073 135 HOH HOH . 
F 3 HOH Y 74 1074 11 HOH HOH . 
F 3 HOH Y 75 1075 168 HOH HOH . 
F 3 HOH Y 76 1076 83 HOH HOH . 
F 3 HOH Y 77 1077 4 HOH HOH . 
F 3 HOH Y 78 1078 93 HOH HOH . 
F 3 HOH Y 79 1079 179 HOH HOH . 
F 3 HOH Y 80 1080 47 HOH HOH . 
F 3 HOH Y 81 1081 65 HOH HOH . 
F 3 HOH Y 82 1082 79 HOH HOH . 
F 3 HOH Y 83 1083 150 HOH HOH . 
F 3 HOH Y 84 1084 111 HOH HOH . 
F 3 HOH Y 85 1085 35 HOH HOH . 
F 3 HOH Y 86 1086 50 HOH HOH . 
F 3 HOH Y 87 1087 103 HOH HOH . 
F 3 HOH Y 88 1088 137 HOH HOH . 
F 3 HOH Y 89 1089 173 HOH HOH . 
F 3 HOH Y 90 1090 156 HOH HOH . 
F 3 HOH Y 91 1091 33 HOH HOH . 
F 3 HOH Y 92 1092 88 HOH HOH . 
F 3 HOH Y 93 1093 29 HOH HOH . 
F 3 HOH Y 94 1094 142 HOH HOH . 
F 3 HOH Y 95 1095 190 HOH HOH . 
F 3 HOH Y 96 1096 177 HOH HOH . 
F 3 HOH Y 97 1097 125 HOH HOH . 
F 3 HOH Y 98 1098 148 HOH HOH . 
F 3 HOH Y 99 1099 73 HOH HOH . 
F 3 HOH Y 100 1100 43 HOH HOH . 
F 3 HOH Y 101 1101 3 HOH HOH . 
F 3 HOH Y 102 1102 36 HOH HOH . 
F 3 HOH Y 103 1103 169 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . D 2 101.689 44.263 29.849 1 44.27 0 C1 MPD 901 Y 1 
HETATM 2 C C2 MPD . . . D 2 100.258 44.069 30.33 1 47.41 0 C2 MPD 901 Y 1 
HETATM 3 O O2 MPD . . . D 2 100.1 42.671 30.66 1 44.58 0 O2 MPD 901 Y 1 
HETATM 4 C CM MPD . . . D 2 99.287 44.465 29.226 1 43.77 0 CM MPD 901 Y 1 
HETATM 5 C C3 MPD . . . D 2 99.981 44.798 31.649 1 47.7 0 C3 MPD 901 Y 1 
HETATM 6 C C4 MPD . . . D 2 100.56 46.189 31.805 1 57.98 0 C4 MPD 901 Y 1 
HETATM 7 O O4 MPD . . . D 2 100.195 46.91 30.64 1 57.65 0 O4 MPD 901 Y 1 
HETATM 8 C C5 MPD . . . D 2 99.967 46.867 33.011 1 58.84 0 C5 MPD 901 Y 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           700 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           8 
#