data_7ZG4 # _model_server_result.job_id x0DI2OKNmqyQW2VswjsKng _model_server_result.datetime_utc '2024-11-25 12:43:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zg4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":603}' # _entry.id 7ZG4 # _exptl.entry_id 7ZG4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 136.155 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-methylpyrimidine-2-carboximidamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7ZG4 _cell.length_a 80.38 _cell.length_b 80.38 _cell.length_c 114.3 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZG4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall 'P 65' _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N # _chem_comp.formula 'C6 H8 N4' _chem_comp.formula_weight 136.155 _chem_comp.id IQL _chem_comp.mon_nstd_flag . _chem_comp.name N-methylpyrimidine-2-carboximidamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "N'-methylpyrimidine-2-carboximidamide" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C09 N10 IQL doub 186 n y C09 C08 IQL sing 187 n y N10 C05 IQL sing 188 n y N02 C01 IQL sing 189 n n N02 C03 IQL sing 190 n n C08 C07 IQL doub 191 n y C05 C03 IQL sing 192 n n C05 N06 IQL doub 193 n y C03 N04 IQL doub 194 n n N06 C07 IQL sing 195 n y C01 H1 IQL sing 196 n n C01 H2 IQL sing 197 n n C01 H3 IQL sing 198 n n C07 H4 IQL sing 199 n n C08 H5 IQL sing 200 n n C09 H6 IQL sing 201 n n N02 H7 IQL sing 202 n n N04 H8 IQL sing 203 n n # _atom_sites.entry_id 7ZG4 _atom_sites.fract_transf_matrix[1][1] 0.012441 _atom_sites.fract_transf_matrix[1][2] 0.007183 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014366 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 601 2 SO4 SO4 . D 2 SO4 A 1 602 3 SO4 SO4 . E 2 SO4 A 1 603 4 SO4 SO4 . F 3 IQL A 1 604 7 IQL LIG . G 2 SO4 B 1 601 1 SO4 SO4 . H 2 SO4 B 1 602 5 SO4 SO4 . I 3 IQL B 1 603 6 IQL LIG . J 4 GOL B 1 604 8 GOL GOL . K 5 HOH A 1 701 51 HOH HOH . K 5 HOH A 2 702 6 HOH HOH . K 5 HOH A 3 703 39 HOH HOH . K 5 HOH A 4 704 35 HOH HOH . K 5 HOH A 5 705 19 HOH HOH . K 5 HOH A 6 706 12 HOH HOH . K 5 HOH A 7 707 38 HOH HOH . K 5 HOH A 8 708 30 HOH HOH . K 5 HOH A 9 709 21 HOH HOH . K 5 HOH A 10 710 54 HOH HOH . K 5 HOH A 11 711 56 HOH HOH . K 5 HOH A 12 712 20 HOH HOH . K 5 HOH A 13 713 47 HOH HOH . K 5 HOH A 14 714 24 HOH HOH . K 5 HOH A 15 715 2 HOH HOH . K 5 HOH A 16 716 25 HOH HOH . K 5 HOH A 17 717 44 HOH HOH . K 5 HOH A 18 718 48 HOH HOH . K 5 HOH A 19 719 7 HOH HOH . K 5 HOH A 20 720 3 HOH HOH . K 5 HOH A 21 721 53 HOH HOH . K 5 HOH A 22 722 42 HOH HOH . K 5 HOH A 23 723 45 HOH HOH . L 5 HOH B 1 701 33 HOH HOH . L 5 HOH B 2 702 14 HOH HOH . L 5 HOH B 3 703 34 HOH HOH . L 5 HOH B 4 704 41 HOH HOH . L 5 HOH B 5 705 55 HOH HOH . L 5 HOH B 6 706 36 HOH HOH . L 5 HOH B 7 707 52 HOH HOH . L 5 HOH B 8 708 50 HOH HOH . L 5 HOH B 9 709 32 HOH HOH . L 5 HOH B 10 710 43 HOH HOH . L 5 HOH B 11 711 23 HOH HOH . L 5 HOH B 12 712 13 HOH HOH . L 5 HOH B 13 713 17 HOH HOH . L 5 HOH B 14 714 57 HOH HOH . L 5 HOH B 15 715 37 HOH HOH . L 5 HOH B 16 716 18 HOH HOH . L 5 HOH B 17 717 26 HOH HOH . L 5 HOH B 18 718 4 HOH HOH . L 5 HOH B 19 719 5 HOH HOH . L 5 HOH B 20 720 46 HOH HOH . L 5 HOH B 21 721 15 HOH HOH . L 5 HOH B 22 722 27 HOH HOH . L 5 HOH B 23 723 22 HOH HOH . L 5 HOH B 24 724 49 HOH HOH . L 5 HOH B 25 725 28 HOH HOH . L 5 HOH B 26 726 31 HOH HOH . L 5 HOH B 27 727 40 HOH HOH . L 5 HOH B 28 728 9 HOH HOH . L 5 HOH B 29 729 8 HOH HOH . L 5 HOH B 30 730 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 IQL . . . I 3 21.962 44.627 -10.016 1 29.32 ? C01 IQL 603 B 1 HETATM 2 C C03 IQL . . . I 3 23.366 42.537 -9.877 1 31.35 ? C03 IQL 603 B 1 HETATM 3 C C05 IQL . . . I 3 24.744 41.874 -9.911 1 35.91 ? C05 IQL 603 B 1 HETATM 4 C C07 IQL . . . I 3 26.027 39.995 -9.702 1 32.83 ? C07 IQL 603 B 1 HETATM 5 C C08 IQL . . . I 3 27.185 40.751 -9.926 1 35.73 ? C08 IQL 603 B 1 HETATM 6 C C09 IQL . . . I 3 27.045 42.119 -10.142 1 29.6 ? C09 IQL 603 B 1 HETATM 7 N N02 IQL . . . I 3 23.253 43.972 -10.053 1 29.23 ? N02 IQL 603 B 1 HETATM 8 N N04 IQL . . . I 3 22.342 41.85 -9.658 1 30.99 ? N04 IQL 603 B 1 HETATM 9 N N06 IQL . . . I 3 24.831 40.569 -9.711 1 30.48 ? N06 IQL 603 B 1 HETATM 10 N N10 IQL . . . I 3 25.819 42.624 -10.131 1 31.26 ? N10 IQL 603 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #