data_7ZHW # _model_server_result.job_id TxqIXqdtA0-7yDvTyoe1qw _model_server_result.datetime_utc '2024-10-20 00:51:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zhw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 7ZHW # _exptl.entry_id 7ZHW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 120.708 _cell.angle_gamma 90 _cell.entry_id 7ZHW _cell.length_a 215.83 _cell.length_b 66.77 _cell.length_c 121.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZHW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 K N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 56 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 56 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 138 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 138 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 275 n n PA O2A NDP sing 276 n n PA O5B NDP sing 277 n n PA O3 NDP sing 278 n n O2A HOA2 NDP sing 279 n n O5B C5B NDP sing 280 n n C5B C4B NDP sing 281 n n C5B H51A NDP sing 282 n n C5B H52A NDP sing 283 n n C4B O4B NDP sing 284 n n C4B C3B NDP sing 285 n n C4B H4B NDP sing 286 n n O4B C1B NDP sing 287 n n C3B O3B NDP sing 288 n n C3B C2B NDP sing 289 n n C3B H3B NDP sing 290 n n O3B HO3A NDP sing 291 n n C2B O2B NDP sing 292 n n C2B C1B NDP sing 293 n n C2B H2B NDP sing 294 n n O2B P2B NDP sing 295 n n C1B N9A NDP sing 296 n n C1B H1B NDP sing 297 n n N9A C8A NDP sing 298 n y N9A C4A NDP sing 299 n y C8A N7A NDP doub 300 n y C8A H8A NDP sing 301 n n N7A C5A NDP sing 302 n y C5A C6A NDP sing 303 n y C5A C4A NDP doub 304 n y C6A N6A NDP sing 305 n n C6A N1A NDP doub 306 n y N6A H61A NDP sing 307 n n N6A H62A NDP sing 308 n n N1A C2A NDP sing 309 n y C2A N3A NDP doub 310 n y C2A H2A NDP sing 311 n n N3A C4A NDP sing 312 n y O3 PN NDP sing 313 n n PN O1N NDP doub 314 n n PN O2N NDP sing 315 n n PN O5D NDP sing 316 n n O2N H21N NDP sing 317 n n O5D C5D NDP sing 318 n n C5D C4D NDP sing 319 n n C5D H51N NDP sing 320 n n C5D H52N NDP sing 321 n n C4D O4D NDP sing 322 n n C4D C3D NDP sing 323 n n C4D H4D NDP sing 324 n n O4D C1D NDP sing 325 n n C3D O3D NDP sing 326 n n C3D C2D NDP sing 327 n n C3D H3D NDP sing 328 n n O3D HO3N NDP sing 329 n n C2D O2D NDP sing 330 n n C2D C1D NDP sing 331 n n C2D H2D NDP sing 332 n n O2D HO2N NDP sing 333 n n C1D N1N NDP sing 334 n n C1D H1D NDP sing 335 n n N1N C2N NDP sing 336 n n N1N C6N NDP sing 337 n n C2N C3N NDP doub 338 n n C2N H2N NDP sing 339 n n C3N C7N NDP sing 340 n n C3N C4N NDP sing 341 n n C7N O7N NDP doub 342 n n C7N N7N NDP sing 343 n n N7N H71N NDP sing 344 n n N7N H72N NDP sing 345 n n C4N C5N NDP sing 346 n n C4N H41N NDP sing 347 n n C4N H42N NDP sing 348 n n C5N C6N NDP doub 349 n n C5N H5N NDP sing 350 n n C6N H6N NDP sing 351 n n P2B O1X NDP doub 352 n n P2B O2X NDP sing 353 n n P2B O3X NDP sing 354 n n O2X HOP2 NDP sing 355 n n O3X HOP3 NDP sing 356 n n # _atom_sites.entry_id 7ZHW _atom_sites.fract_transf_matrix[1][1] 0.004633 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002752 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009611 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 601 601 NDP NDP . D 3 EDO A 1 602 768 EDO EDO . E 3 EDO A 1 603 968 EDO EDO . F 4 SO4 A 1 604 1 SO4 SO4 . G 4 SO4 A 1 605 2 SO4 SO4 . H 4 SO4 A 1 606 5 SO4 SO4 . I 4 SO4 A 1 607 7 SO4 SO4 . J 5 BG6 B 1 601 868 BG6 BG6 . K 2 NDP B 1 602 601 NDP NDP . L 3 EDO B 1 603 768 EDO EDO . M 4 SO4 B 1 604 3 SO4 SO4 . N 4 SO4 B 1 605 4 SO4 SO4 . O 6 HOH A 1 701 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 2 12.47 -59.056 99.639 1 205.51 ? PA NDP 601 A 1 HETATM 2 O O1A NDP . . . C 2 13.194 -57.896 100.247 1 192.83 ? O1A NDP 601 A 1 HETATM 3 O O2A NDP . . . C 2 11.028 -58.943 99.931 1 210.36 ? O2A NDP 601 A 1 HETATM 4 O O5B NDP . . . C 2 13.072 -60.484 100.269 1 195.87 ? O5B NDP 601 A 1 HETATM 5 C C5B NDP . . . C 2 12.344 -61.662 100.041 1 195.42 ? C5B NDP 601 A 1 HETATM 6 C C4B NDP . . . C 2 12.876 -62.791 100.92 1 186.07 ? C4B NDP 601 A 1 HETATM 7 O O4B NDP . . . C 2 14.108 -62.543 101.272 1 188.27 ? O4B NDP 601 A 1 HETATM 8 C C3B NDP . . . C 2 12.053 -62.865 102.242 1 181.97 ? C3B NDP 601 A 1 HETATM 9 O O3B NDP . . . C 2 11.072 -63.837 102.156 1 171.1 ? O3B NDP 601 A 1 HETATM 10 C C2B NDP . . . C 2 13.09 -63.222 103.273 1 182.48 ? C2B NDP 601 A 1 HETATM 11 O O2B NDP . . . C 2 13.362 -64.708 103.27 1 170.78 ? O2B NDP 601 A 1 HETATM 12 C C1B NDP . . . C 2 14.17 -62.55 102.868 1 183.74 ? C1B NDP 601 A 1 HETATM 13 N N9A NDP . . . C 2 14.131 -61.187 103.359 1 196.58 ? N9A NDP 601 A 1 HETATM 14 C C8A NDP . . . C 2 13.252 -60.27 103.787 1 205.49 ? C8A NDP 601 A 1 HETATM 15 N N7A NDP . . . C 2 13.929 -59.156 104.103 1 203.98 ? N7A NDP 601 A 1 HETATM 16 C C5A NDP . . . C 2 15.235 -59.382 103.869 1 196.81 ? C5A NDP 601 A 1 HETATM 17 C C6A NDP . . . C 2 16.351 -58.586 104.02 1 185.5 ? C6A NDP 601 A 1 HETATM 18 N N6A NDP . . . C 2 16.597 -57.224 104.474 1 182.78 ? N6A NDP 601 A 1 HETATM 19 N N1A NDP . . . C 2 17.554 -59.061 103.709 1 176.04 ? N1A NDP 601 A 1 HETATM 20 C C2A NDP . . . C 2 17.683 -60.326 103.245 1 171.61 ? C2A NDP 601 A 1 HETATM 21 N N3A NDP . . . C 2 16.586 -61.11 103.095 1 177.58 ? N3A NDP 601 A 1 HETATM 22 C C4A NDP . . . C 2 15.363 -60.634 103.409 1 191.22 ? C4A NDP 601 A 1 HETATM 23 O O3 NDP . . . C 2 12.71 -59.05 98 1 187.04 ? O3 NDP 601 A 1 HETATM 24 P PN NDP . . . C 2 11.527 -59.415 96.868 1 184.96 ? PN NDP 601 A 1 HETATM 25 O O1N NDP . . . C 2 10.95 -60.759 97.148 1 174.45 ? O1N NDP 601 A 1 HETATM 26 O O2N NDP . . . C 2 10.456 -58.401 96.919 1 179.76 ? O2N NDP 601 A 1 HETATM 27 O O5D NDP . . . C 2 12.231 -59.414 95.372 1 168.46 ? O5D NDP 601 A 1 HETATM 28 C C5D NDP . . . C 2 13.663 -59.681 95.311 1 166.61 ? C5D NDP 601 A 1 HETATM 29 C C4D NDP . . . C 2 14.251 -59.195 93.905 1 157.05 ? C4D NDP 601 A 1 HETATM 30 O O4D NDP . . . C 2 13.34 -59.287 92.987 1 161.36 ? O4D NDP 601 A 1 HETATM 31 C C3D NDP . . . C 2 14.645 -57.711 93.981 1 155.65 ? C3D NDP 601 A 1 HETATM 32 O O3D NDP . . . C 2 15.865 -57.502 93.327 1 149.5 ? O3D NDP 601 A 1 HETATM 33 C C2D NDP . . . C 2 13.526 -56.987 93.257 1 161.03 ? C2D NDP 601 A 1 HETATM 34 O O2D NDP . . . C 2 14.043 -55.704 92.605 1 157.96 ? O2D NDP 601 A 1 HETATM 35 C C1D NDP . . . C 2 13.15 -57.833 92.344 1 168.39 ? C1D NDP 601 A 1 HETATM 36 P P2B NDP . . . C 2 13.114 -65.551 104.693 1 172.57 ? P2B NDP 601 A 1 HETATM 37 O O1X NDP . . . C 2 11.672 -65.871 104.822 1 160.61 ? O1X NDP 601 A 1 HETATM 38 O O2X NDP . . . C 2 13.943 -66.844 104.728 1 174.35 ? O2X NDP 601 A 1 HETATM 39 O O3X NDP . . . C 2 13.501 -64.671 105.823 1 164.82 ? O3X NDP 601 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 39 #