data_7ZHZ # _model_server_result.job_id lhriZYszuiDOax-dOeBr6Q _model_server_result.datetime_utc '2024-11-30 04:06:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zhz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 7ZHZ # _exptl.entry_id 7ZHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 120.731 _cell.angle_gamma 90 _cell.entry_id 7ZHZ _cell.length_a 218.16 _cell.length_b 66.02 _cell.length_c 120.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 I N N ? 3 K N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 112 n n C1 C2 EDO sing 113 n n C1 H11 EDO sing 114 n n C1 H12 EDO sing 115 n n O1 HO1 EDO sing 116 n n C2 O2 EDO sing 117 n n C2 H21 EDO sing 118 n n C2 H22 EDO sing 119 n n O2 HO2 EDO sing 120 n n # _atom_sites.entry_id 7ZHZ _atom_sites.fract_transf_matrix[1][1] 0.004584 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002725 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009693 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 601 601 NDP NDP . D 3 EDO A 1 602 668 EDO EDO . E 3 EDO A 1 603 768 EDO EDO . F 4 SO4 A 1 604 4 SO4 SO4 . G 4 SO4 A 1 605 5 SO4 SO4 . H 4 SO4 A 1 606 7 SO4 SO4 . I 3 EDO B 1 601 968 EDO EDO . J 2 NDP B 1 602 601 NDP NDP . K 3 EDO B 1 603 768 EDO EDO . L 5 BG6 B 1 604 868 BG6 BG6 . M 4 SO4 B 1 605 6 SO4 SO4 . N 4 SO4 B 1 606 8 SO4 SO4 . O 4 SO4 B 1 607 9 SO4 SO4 . P 4 SO4 B 1 608 10 SO4 SO4 . Q 6 HOH A 1 701 1 HOH HOH . Q 6 HOH A 2 702 18 HOH HOH . Q 6 HOH A 3 703 7 HOH HOH . Q 6 HOH A 4 704 2 HOH HOH . Q 6 HOH A 5 705 15 HOH HOH . Q 6 HOH A 6 706 6 HOH HOH . Q 6 HOH A 7 707 19 HOH HOH . Q 6 HOH A 8 708 4 HOH HOH . Q 6 HOH A 9 709 3 HOH HOH . Q 6 HOH A 10 710 14 HOH HOH . Q 6 HOH A 11 711 8 HOH HOH . Q 6 HOH A 12 712 11 HOH HOH . Q 6 HOH A 13 713 23 HOH HOH . Q 6 HOH A 14 714 22 HOH HOH . Q 6 HOH A 15 715 13 HOH HOH . R 6 HOH B 1 701 25 HOH HOH . R 6 HOH B 2 702 17 HOH HOH . R 6 HOH B 3 703 5 HOH HOH . R 6 HOH B 4 704 9 HOH HOH . R 6 HOH B 5 705 10 HOH HOH . R 6 HOH B 6 706 21 HOH HOH . R 6 HOH B 7 707 24 HOH HOH . R 6 HOH B 8 708 20 HOH HOH . R 6 HOH B 9 709 12 HOH HOH . R 6 HOH B 10 710 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 4.558 -60.642 79.442 1 90.98 ? C1 EDO 602 A 1 HETATM 2 O O1 EDO . . . D 3 4.696 -59.278 79.029 1 97.29 ? O1 EDO 602 A 1 HETATM 3 C C2 EDO . . . D 3 3.878 -61.442 78.337 1 93.52 ? C2 EDO 602 A 1 HETATM 4 O O2 EDO . . . D 3 4.724 -61.48 77.183 1 107.64 ? O2 EDO 602 A 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 49 _model_server_stats.create_model_time_ms 79 _model_server_stats.query_time_ms 1394 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #