data_7ZHZ # _model_server_result.job_id gdmOcIc-qJdk_qern3sSSQ _model_server_result.datetime_utc '2025-03-11 05:10:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zhz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":602}' # _entry.id 7ZHZ # _exptl.entry_id 7ZHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 120.731 _cell.angle_gamma 90 _cell.entry_id 7ZHZ _cell.length_a 218.16 _cell.length_b 66.02 _cell.length_c 120.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 J N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 275 n n PA O2A NDP sing 276 n n PA O5B NDP sing 277 n n PA O3 NDP sing 278 n n O2A HOA2 NDP sing 279 n n O5B C5B NDP sing 280 n n C5B C4B NDP sing 281 n n C5B H51A NDP sing 282 n n C5B H52A NDP sing 283 n n C4B O4B NDP sing 284 n n C4B C3B NDP sing 285 n n C4B H4B NDP sing 286 n n O4B C1B NDP sing 287 n n C3B O3B NDP sing 288 n n C3B C2B NDP sing 289 n n C3B H3B NDP sing 290 n n O3B HO3A NDP sing 291 n n C2B O2B NDP sing 292 n n C2B C1B NDP sing 293 n n C2B H2B NDP sing 294 n n O2B P2B NDP sing 295 n n C1B N9A NDP sing 296 n n C1B H1B NDP sing 297 n n N9A C8A NDP sing 298 n y N9A C4A NDP sing 299 n y C8A N7A NDP doub 300 n y C8A H8A NDP sing 301 n n N7A C5A NDP sing 302 n y C5A C6A NDP sing 303 n y C5A C4A NDP doub 304 n y C6A N6A NDP sing 305 n n C6A N1A NDP doub 306 n y N6A H61A NDP sing 307 n n N6A H62A NDP sing 308 n n N1A C2A NDP sing 309 n y C2A N3A NDP doub 310 n y C2A H2A NDP sing 311 n n N3A C4A NDP sing 312 n y O3 PN NDP sing 313 n n PN O1N NDP doub 314 n n PN O2N NDP sing 315 n n PN O5D NDP sing 316 n n O2N H21N NDP sing 317 n n O5D C5D NDP sing 318 n n C5D C4D NDP sing 319 n n C5D H51N NDP sing 320 n n C5D H52N NDP sing 321 n n C4D O4D NDP sing 322 n n C4D C3D NDP sing 323 n n C4D H4D NDP sing 324 n n O4D C1D NDP sing 325 n n C3D O3D NDP sing 326 n n C3D C2D NDP sing 327 n n C3D H3D NDP sing 328 n n O3D HO3N NDP sing 329 n n C2D O2D NDP sing 330 n n C2D C1D NDP sing 331 n n C2D H2D NDP sing 332 n n O2D HO2N NDP sing 333 n n C1D N1N NDP sing 334 n n C1D H1D NDP sing 335 n n N1N C2N NDP sing 336 n n N1N C6N NDP sing 337 n n C2N C3N NDP doub 338 n n C2N H2N NDP sing 339 n n C3N C7N NDP sing 340 n n C3N C4N NDP sing 341 n n C7N O7N NDP doub 342 n n C7N N7N NDP sing 343 n n N7N H71N NDP sing 344 n n N7N H72N NDP sing 345 n n C4N C5N NDP sing 346 n n C4N H41N NDP sing 347 n n C4N H42N NDP sing 348 n n C5N C6N NDP doub 349 n n C5N H5N NDP sing 350 n n C6N H6N NDP sing 351 n n P2B O1X NDP doub 352 n n P2B O2X NDP sing 353 n n P2B O3X NDP sing 354 n n O2X HOP2 NDP sing 355 n n O3X HOP3 NDP sing 356 n n # _atom_sites.entry_id 7ZHZ _atom_sites.fract_transf_matrix[1][1] 0.004584 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002725 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009693 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 601 601 NDP NDP . D 3 EDO A 1 602 668 EDO EDO . E 3 EDO A 1 603 768 EDO EDO . F 4 SO4 A 1 604 4 SO4 SO4 . G 4 SO4 A 1 605 5 SO4 SO4 . H 4 SO4 A 1 606 7 SO4 SO4 . I 3 EDO B 1 601 968 EDO EDO . J 2 NDP B 1 602 601 NDP NDP . K 3 EDO B 1 603 768 EDO EDO . L 5 BG6 B 1 604 868 BG6 BG6 . M 4 SO4 B 1 605 6 SO4 SO4 . N 4 SO4 B 1 606 8 SO4 SO4 . O 4 SO4 B 1 607 9 SO4 SO4 . P 4 SO4 B 1 608 10 SO4 SO4 . Q 6 HOH A 1 701 1 HOH HOH . Q 6 HOH A 2 702 18 HOH HOH . Q 6 HOH A 3 703 7 HOH HOH . Q 6 HOH A 4 704 2 HOH HOH . Q 6 HOH A 5 705 15 HOH HOH . Q 6 HOH A 6 706 6 HOH HOH . Q 6 HOH A 7 707 19 HOH HOH . Q 6 HOH A 8 708 4 HOH HOH . Q 6 HOH A 9 709 3 HOH HOH . Q 6 HOH A 10 710 14 HOH HOH . Q 6 HOH A 11 711 8 HOH HOH . Q 6 HOH A 12 712 11 HOH HOH . Q 6 HOH A 13 713 23 HOH HOH . Q 6 HOH A 14 714 22 HOH HOH . Q 6 HOH A 15 715 13 HOH HOH . R 6 HOH B 1 701 25 HOH HOH . R 6 HOH B 2 702 17 HOH HOH . R 6 HOH B 3 703 5 HOH HOH . R 6 HOH B 4 704 9 HOH HOH . R 6 HOH B 5 705 10 HOH HOH . R 6 HOH B 6 706 21 HOH HOH . R 6 HOH B 7 707 24 HOH HOH . R 6 HOH B 8 708 20 HOH HOH . R 6 HOH B 9 709 12 HOH HOH . R 6 HOH B 10 710 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . J 2 -17.062 -51.342 16.342 1 100.58 ? PA NDP 602 B 1 HETATM 2 O O1A NDP . . . J 2 -16.494 -52.151 15.218 1 88.18 ? O1A NDP 602 B 1 HETATM 3 O O2A NDP . . . J 2 -18.274 -52.005 16.859 1 106.28 ? O2A NDP 602 B 1 HETATM 4 O O5B NDP . . . J 2 -17.442 -49.811 15.788 1 105.04 ? O5B NDP 602 B 1 HETATM 5 C C5B NDP . . . J 2 -18.118 -48.938 16.654 1 92.88 ? C5B NDP 602 B 1 HETATM 6 C C4B NDP . . . J 2 -19.112 -48.087 15.866 1 107.09 ? C4B NDP 602 B 1 HETATM 7 O O4B NDP . . . J 2 -18.476 -47.318 15.025 1 102.57 ? O4B NDP 602 B 1 HETATM 8 C C3B NDP . . . J 2 -20.028 -49.002 15 1 100.02 ? C3B NDP 602 B 1 HETATM 9 O O3B NDP . . . J 2 -21.217 -49.262 15.658 1 97.96 ? O3B NDP 602 B 1 HETATM 10 C C2B NDP . . . J 2 -20.282 -48.166 13.78 1 101.28 ? C2B NDP 602 B 1 HETATM 11 O O2B NDP . . . J 2 -21.374 -47.173 14.082 1 106.94 ? O2B NDP 602 B 1 HETATM 12 C C1B NDP . . . J 2 -19.121 -47.539 13.58 1 93.98 ? C1B NDP 602 B 1 HETATM 13 N N9A NDP . . . J 2 -18.243 -48.364 12.777 1 96.33 ? N9A NDP 602 B 1 HETATM 14 C C8A NDP . . . J 2 -17.724 -49.6 12.754 1 97.26 ? C8A NDP 602 B 1 HETATM 15 N N7A NDP . . . J 2 -16.947 -49.706 11.665 1 117.34 ? N7A NDP 602 B 1 HETATM 16 C C5A NDP . . . J 2 -16.985 -48.53 11.01 1 106.62 ? C5A NDP 602 B 1 HETATM 17 C C6A NDP . . . J 2 -16.379 -48.1 9.849 1 100.53 ? C6A NDP 602 B 1 HETATM 18 N N6A NDP . . . J 2 -15.478 -48.691 8.869 1 103.16 ? N6A NDP 602 B 1 HETATM 19 N N1A NDP . . . J 2 -16.587 -46.861 9.41 1 93.58 ? N1A NDP 602 B 1 HETATM 20 C C2A NDP . . . J 2 -17.394 -46.025 10.102 1 90.15 ? C2A NDP 602 B 1 HETATM 21 N N3A NDP . . . J 2 -17.992 -46.447 11.244 1 97.45 ? N3A NDP 602 B 1 HETATM 22 C C4A NDP . . . J 2 -17.784 -47.701 11.694 1 101.78 ? C4A NDP 602 B 1 HETATM 23 O O3 NDP . . . J 2 -15.932 -51.213 17.547 1 118.73 ? O3 NDP 602 B 1 HETATM 24 P PN NDP . . . J 2 -16.309 -51.156 19.18 1 112.68 ? PN NDP 602 B 1 HETATM 25 O O1N NDP . . . J 2 -17.667 -50.575 19.368 1 105 ? O1N NDP 602 B 1 HETATM 26 O O2N NDP . . . J 2 -16.276 -52.518 19.745 1 122.68 ? O2N NDP 602 B 1 HETATM 27 O O5D NDP . . . J 2 -15.199 -50.205 19.952 1 96.46 ? O5D NDP 602 B 1 HETATM 28 C C5D NDP . . . J 2 -14.727 -49.012 19.26 1 96.14 ? C5D NDP 602 B 1 HETATM 29 C C4D NDP . . . J 2 -13.13 -48.928 19.337 1 105.12 ? C4D NDP 602 B 1 HETATM 30 O O4D NDP . . . J 2 -12.738 -49.004 20.568 1 109.59 ? O4D NDP 602 B 1 HETATM 31 C C3D NDP . . . J 2 -12.474 -50.111 18.61 1 116.47 ? C3D NDP 602 B 1 HETATM 32 O O3D NDP . . . J 2 -11.369 -49.653 17.882 1 105.89 ? O3D NDP 602 B 1 HETATM 33 C C2D NDP . . . J 2 -12.017 -51.047 19.715 1 126.12 ? C2D NDP 602 B 1 HETATM 34 O O2D NDP . . . J 2 -10.742 -51.775 19.291 1 123.74 ? O2D NDP 602 B 1 HETATM 35 C C1D NDP . . . J 2 -11.763 -50.263 20.723 1 119.37 ? C1D NDP 602 B 1 HETATM 36 N N1N NDP . . . J 2 -12.012 -50.947 22.025 1 109.68 ? N1N NDP 602 B 1 HETATM 37 C C2N NDP . . . J 2 -13.163 -51.773 22.205 1 116.03 ? C2N NDP 602 B 1 HETATM 38 C C3N NDP . . . J 2 -13.264 -52.768 23.312 1 124.78 ? C3N NDP 602 B 1 HETATM 39 C C7N NDP . . . J 2 -14.594 -53.449 23.548 1 120.79 ? C7N NDP 602 B 1 HETATM 40 O O7N NDP . . . J 2 -14.769 -54.111 24.554 1 124.47 ? O7N NDP 602 B 1 HETATM 41 N N7N NDP . . . J 2 -15.642 -53.313 22.596 1 110.75 ? N7N NDP 602 B 1 HETATM 42 C C4N NDP . . . J 2 -12.224 -52.765 24.497 1 116.9 ? C4N NDP 602 B 1 HETATM 43 C C5N NDP . . . J 2 -11.166 -51.623 24.403 1 117.07 ? C5N NDP 602 B 1 HETATM 44 C C6N NDP . . . J 2 -11.075 -50.753 23.117 1 113.72 ? C6N NDP 602 B 1 HETATM 45 P P2B NDP . . . J 2 -22.219 -46.488 12.814 1 91.93 ? P2B NDP 602 B 1 HETATM 46 O O1X NDP . . . J 2 -22.374 -47.487 11.728 1 96.09 ? O1X NDP 602 B 1 HETATM 47 O O2X NDP . . . J 2 -23.597 -46.052 13.301 1 88.46 ? O2X NDP 602 B 1 HETATM 48 O O3X NDP . . . J 2 -21.475 -45.308 12.309 1 80.82 ? O3X NDP 602 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 48 #