data_7ZI6 # _model_server_result.job_id fNayiJywZTb6Z-4mcEK3YA _model_server_result.datetime_utc '2024-11-27 23:22:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zi6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 7ZI6 # _exptl.entry_id 7ZI6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 485.647 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(4-azanylpyrimidin-2-yl)-N-[2-methyl-5-[4-[2-(4-methylpiperazin-1-yl)ethyl]phenyl]phenyl]-1,3-thiazol-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZI6 _cell.length_a 68.629 _cell.length_b 68.629 _cell.length_c 122.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZI6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LYS 62 A LYS 42 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc2 A O SER 65 A SER 45 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc3 A O TRP 68 A TRP 48 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc4 D NA NA . A NA 303 1_555 E O HOH . A HOH 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? # _chem_comp.formula 'C27 H31 N7 S' _chem_comp.formula_weight 485.647 _chem_comp.id JAQ _chem_comp.mon_nstd_flag . _chem_comp.name 4-(4-azanylpyrimidin-2-yl)-N-[2-methyl-5-[4-[2-(4-methylpiperazin-1-yl)ethyl]phenyl]phenyl]-1,3-thiazol-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 JAQ sing 173 n n C3 C2 JAQ doub 174 n y C3 C4 JAQ sing 175 n y C2 C20 JAQ sing 176 n y C4 C5 JAQ doub 177 n y C20 N3 JAQ sing 178 n n C20 C19 JAQ doub 179 n y N3 C21 JAQ sing 180 n n N6 C26 JAQ sing 181 n n N4 C21 JAQ doub 182 n y N4 C22 JAQ sing 183 n y C26 N7 JAQ doub 184 n y C26 C25 JAQ sing 185 n y C21 S1 JAQ sing 186 n y N7 C23 JAQ sing 187 n y C5 C19 JAQ sing 188 n y C5 C6 JAQ sing 189 n n C25 C24 JAQ doub 190 n y C23 C22 JAQ sing 191 n n C23 N5 JAQ doub 192 n y C22 C27 JAQ doub 193 n y C24 N5 JAQ sing 194 n y S1 C27 JAQ sing 195 n y C6 C18 JAQ doub 196 n y C6 C7 JAQ sing 197 n y C18 C17 JAQ sing 198 n y C7 C8 JAQ doub 199 n y C17 C9 JAQ doub 200 n y C8 C9 JAQ sing 201 n y C9 C10 JAQ sing 202 n n C11 C10 JAQ sing 203 n n C11 N1 JAQ sing 204 n n C12 N1 JAQ sing 205 n n C12 C13 JAQ sing 206 n n N1 C16 JAQ sing 207 n n C13 N2 JAQ sing 208 n n C16 C15 JAQ sing 209 n n N2 C15 JAQ sing 210 n n N2 C14 JAQ sing 211 n n N3 H2 JAQ sing 212 n n C4 H3 JAQ sing 213 n n C7 H4 JAQ sing 214 n n C8 H5 JAQ sing 215 n n C10 H6 JAQ sing 216 n n C10 H7 JAQ sing 217 n n C13 H8 JAQ sing 218 n n C13 H9 JAQ sing 219 n n C15 H10 JAQ sing 220 n n C15 H11 JAQ sing 221 n n C17 H12 JAQ sing 222 n n C24 H13 JAQ sing 223 n n C1 H14 JAQ sing 224 n n C1 H15 JAQ sing 225 n n C1 H16 JAQ sing 226 n n C3 H17 JAQ sing 227 n n C11 H18 JAQ sing 228 n n C11 H19 JAQ sing 229 n n C12 H20 JAQ sing 230 n n C12 H21 JAQ sing 231 n n C14 H23 JAQ sing 232 n n C14 H24 JAQ sing 233 n n C14 H25 JAQ sing 234 n n C16 H26 JAQ sing 235 n n C16 H27 JAQ sing 236 n n C18 H28 JAQ sing 237 n n C19 H29 JAQ sing 238 n n C25 H30 JAQ sing 239 n n N6 H31 JAQ sing 240 n n N6 H32 JAQ sing 241 n n C27 H33 JAQ sing 242 n n # _atom_sites.entry_id 7ZI6 _atom_sites.fract_transf_matrix[1][1] 0.014571 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008149 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UDP A 1 301 301 UDP UDP . C 3 JAQ A 1 302 302 JAQ LIG . D 4 NA A 1 303 1 NA NA . E 5 HOH A 1 401 27 HOH HOH . E 5 HOH A 2 402 17 HOH HOH . E 5 HOH A 3 403 42 HOH HOH . E 5 HOH A 4 404 34 HOH HOH . E 5 HOH A 5 405 15 HOH HOH . E 5 HOH A 6 406 10 HOH HOH . E 5 HOH A 7 407 29 HOH HOH . E 5 HOH A 8 408 36 HOH HOH . E 5 HOH A 9 409 5 HOH HOH . E 5 HOH A 10 410 14 HOH HOH . E 5 HOH A 11 411 7 HOH HOH . E 5 HOH A 12 412 31 HOH HOH . E 5 HOH A 13 413 24 HOH HOH . E 5 HOH A 14 414 13 HOH HOH . E 5 HOH A 15 415 23 HOH HOH . E 5 HOH A 16 416 20 HOH HOH . E 5 HOH A 17 417 18 HOH HOH . E 5 HOH A 18 418 22 HOH HOH . E 5 HOH A 19 419 8 HOH HOH . E 5 HOH A 20 420 16 HOH HOH . E 5 HOH A 21 421 19 HOH HOH . E 5 HOH A 22 422 4 HOH HOH . E 5 HOH A 23 423 30 HOH HOH . E 5 HOH A 24 424 25 HOH HOH . E 5 HOH A 25 425 1 HOH HOH . E 5 HOH A 26 426 32 HOH HOH . E 5 HOH A 27 427 35 HOH HOH . E 5 HOH A 28 428 6 HOH HOH . E 5 HOH A 29 429 3 HOH HOH . E 5 HOH A 30 430 28 HOH HOH . E 5 HOH A 31 431 41 HOH HOH . E 5 HOH A 32 432 9 HOH HOH . E 5 HOH A 33 433 11 HOH HOH . E 5 HOH A 34 434 39 HOH HOH . E 5 HOH A 35 435 33 HOH HOH . E 5 HOH A 36 436 12 HOH HOH . E 5 HOH A 37 437 2 HOH HOH . E 5 HOH A 38 438 26 HOH HOH . E 5 HOH A 39 439 37 HOH HOH . E 5 HOH A 40 440 40 HOH HOH . E 5 HOH A 41 441 38 HOH HOH . E 5 HOH A 42 442 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 JAQ . . . C 3 -6.268 -40.775 13.665 1 103.24 ? N1 JAQ 302 A 1 HETATM 2 N N3 JAQ . . . C 3 -12.48 -32.475 9.359 1 48.81 ? N3 JAQ 302 A 1 HETATM 3 C C4 JAQ . . . C 3 -11.486 -36.461 8.589 1 51.87 ? C4 JAQ 302 A 1 HETATM 4 C C5 JAQ . . . C 3 -11.053 -35.865 9.77 1 50.79 ? C5 JAQ 302 A 1 HETATM 5 C C6 JAQ . . . C 3 -10.255 -36.624 10.757 1 54.53 ? C6 JAQ 302 A 1 HETATM 6 C C7 JAQ . . . C 3 -9.144 -36.064 11.364 1 59.43 ? C7 JAQ 302 A 1 HETATM 7 C C8 JAQ . . . C 3 -8.387 -36.794 12.265 1 69.33 ? C8 JAQ 302 A 1 HETATM 8 C C10 JAQ . . . C 3 -7.884 -38.89 13.568 1 81.48 ? C10 JAQ 302 A 1 HETATM 9 C C13 JAQ . . . C 3 -4.873 -42.789 13.713 1 120.9 ? C13 JAQ 302 A 1 HETATM 10 C C15 JAQ . . . C 3 -5.225 -41.543 15.743 1 126.87 ? C15 JAQ 302 A 1 HETATM 11 C C17 JAQ . . . C 3 -9.816 -38.662 11.976 1 59.64 ? C17 JAQ 302 A 1 HETATM 12 C C20 JAQ . . . C 3 -12.127 -33.811 9.082 1 50.34 ? C20 JAQ 302 A 1 HETATM 13 C C21 JAQ . . . C 3 -11.669 -31.459 9.748 1 48.15 ? C21 JAQ 302 A 1 HETATM 14 C C22 JAQ . . . C 3 -10.969 -29.388 10.06 1 43.13 ? C22 JAQ 302 A 1 HETATM 15 C C24 JAQ . . . C 3 -12.398 -26.068 10.184 1 43.76 ? C24 JAQ 302 A 1 HETATM 16 C C26 JAQ . . . C 3 -10.097 -25.894 9.76 1 41.06 ? C26 JAQ 302 A 1 HETATM 17 C C1 JAQ . . . C 3 -13.344 -33.649 6.875 1 60.65 ? C1 JAQ 302 A 1 HETATM 18 C C2 JAQ . . . C 3 -12.562 -34.409 7.897 1 54.27 ? C2 JAQ 302 A 1 HETATM 19 C C3 JAQ . . . C 3 -12.234 -35.748 7.667 1 53.06 ? C3 JAQ 302 A 1 HETATM 20 C C9 JAQ . . . C 3 -8.713 -38.101 12.589 1 69.29 ? C9 JAQ 302 A 1 HETATM 21 C C11 JAQ . . . C 3 -6.751 -39.634 12.88 1 87.95 ? C11 JAQ 302 A 1 HETATM 22 C C12 JAQ . . . C 3 -5.295 -41.58 12.912 1 110.33 ? C12 JAQ 302 A 1 HETATM 23 N N2 JAQ . . . C 3 -4.303 -42.406 15.004 1 132.41 ? N2 JAQ 302 A 1 HETATM 24 C C14 JAQ . . . C 3 -3.946 -43.586 15.797 1 125.66 ? C14 JAQ 302 A 1 HETATM 25 C C16 JAQ . . . C 3 -5.639 -40.344 14.924 1 111.07 ? C16 JAQ 302 A 1 HETATM 26 C C18 JAQ . . . C 3 -10.571 -37.941 11.073 1 60.47 ? C18 JAQ 302 A 1 HETATM 27 C C19 JAQ . . . C 3 -11.38 -34.533 10.004 1 51.47 ? C19 JAQ 302 A 1 HETATM 28 N N4 JAQ . . . C 3 -12.021 -30.212 9.691 1 39.73 ? N4 JAQ 302 A 1 HETATM 29 C C23 JAQ . . . C 3 -11.088 -27.945 10.014 1 44.82 ? C23 JAQ 302 A 1 HETATM 30 N N5 JAQ . . . C 3 -12.29 -27.406 10.223 1 46.67 ? N5 JAQ 302 A 1 HETATM 31 C C25 JAQ . . . C 3 -11.315 -25.261 9.964 1 43 ? C25 JAQ 302 A 1 HETATM 32 N N6 JAQ . . . C 3 -8.99 -25.194 9.529 1 44.86 ? N6 JAQ 302 A 1 HETATM 33 N N7 JAQ . . . C 3 -9.991 -27.224 9.786 1 44.64 ? N7 JAQ 302 A 1 HETATM 34 C C27 JAQ . . . C 3 -9.861 -30.051 10.477 1 47.2 ? C27 JAQ 302 A 1 HETATM 35 S S1 JAQ . . . C 3 -10.072 -31.746 10.342 1 48.83 ? S1 JAQ 302 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 35 #