data_7ZID # _model_server_result.job_id 6Zjt6m_R8W1LYcvTPNX0qQ _model_server_result.datetime_utc '2024-12-21 18:37:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zid # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":402}' # _entry.id 7ZID # _exptl.entry_id 7ZID _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.866 _cell.angle_gamma 90 _cell.entry_id 7ZID _cell.length_a 119.26 _cell.length_b 90.016 _cell.length_c 136.942 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZID _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 177 n n C1 C2 GOL sing 178 n n C1 H11 GOL sing 179 n n C1 H12 GOL sing 180 n n O1 HO1 GOL sing 181 n n C2 O2 GOL sing 182 n n C2 C3 GOL sing 183 n n C2 H2 GOL sing 184 n n O2 HO2 GOL sing 185 n n C3 O3 GOL sing 186 n n C3 H31 GOL sing 187 n n C3 H32 GOL sing 188 n n O3 HO3 GOL sing 189 n n # _atom_sites.entry_id 7ZID _atom_sites.fract_transf_matrix[1][1] 0.008385 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002865 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011109 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007717 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GOL A 1 401 401 GOL GOL . E 2 GOL A 1 402 402 GOL GOL . F 3 SO4 A 1 403 1 SO4 SO4 . G 4 EIZ B 1 401 401 EIZ DRG . H 3 SO4 B 1 402 401 SO4 SO4 . I 5 HOH A 1 501 8 HOH HOH . I 5 HOH A 2 502 10 HOH HOH . I 5 HOH A 3 503 2 HOH HOH . I 5 HOH A 4 504 4 HOH HOH . I 5 HOH A 5 505 26 HOH HOH . I 5 HOH A 6 506 7 HOH HOH . I 5 HOH A 7 507 25 HOH HOH . I 5 HOH A 8 508 21 HOH HOH . J 5 HOH B 1 501 18 HOH HOH . J 5 HOH B 2 502 19 HOH HOH . J 5 HOH B 3 503 9 HOH HOH . J 5 HOH B 4 504 3 HOH HOH . J 5 HOH B 5 505 1 HOH HOH . J 5 HOH B 6 506 11 HOH HOH . J 5 HOH B 7 507 13 HOH HOH . J 5 HOH B 8 508 23 HOH HOH . J 5 HOH B 9 509 22 HOH HOH . J 5 HOH B 10 510 12 HOH HOH . J 5 HOH B 11 511 5 HOH HOH . J 5 HOH B 12 512 20 HOH HOH . J 5 HOH B 13 513 14 HOH HOH . J 5 HOH B 14 514 17 HOH HOH . K 5 HOH C 1 401 24 HOH HOH . K 5 HOH C 2 402 15 HOH HOH . K 5 HOH C 3 403 6 HOH HOH . K 5 HOH C 4 404 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 5.629 30.86 -24.052 1 101.66 0 C1 GOL 402 A 1 HETATM 2 O O1 GOL . . . E 2 5.014 30.785 -22.763 1 99.23 0 O1 GOL 402 A 1 HETATM 3 C C2 GOL . . . E 2 6.969 31.577 -23.986 1 100.25 0 C2 GOL 402 A 1 HETATM 4 O O2 GOL . . . E 2 6.926 32.781 -24.768 1 94.7 0 O2 GOL 402 A 1 HETATM 5 C C3 GOL . . . E 2 8.151 30.689 -24.381 1 101.06 0 C3 GOL 402 A 1 HETATM 6 O O3 GOL . . . E 2 8.753 30.03 -23.255 1 96.96 0 O3 GOL 402 A 1 HETATM 7 H H11 GOL . . . E 2 5.029 31.345 -24.672 1 102.68 0 H11 GOL 402 A 1 HETATM 8 H H12 GOL . . . E 2 5.762 29.945 -24.403 1 102.61 0 H12 GOL 402 A 1 HETATM 9 H HO1 GOL . . . E 2 4.295 30.376 -22.768 0 30 0 HO1 GOL 402 A 1 HETATM 10 H H2 GOL . . . E 2 7.11 31.843 -23.046 1 97.64 0 H2 GOL 402 A 1 HETATM 11 H HO2 GOL . . . E 2 7.5 32.786 -25.332 0 30 0 HO2 GOL 402 A 1 HETATM 12 H H31 GOL . . . E 2 8.833 31.247 -24.828 1 99.18 0 H31 GOL 402 A 1 HETATM 13 H H32 GOL . . . E 2 7.843 30.008 -25.027 1 102.03 0 H32 GOL 402 A 1 HETATM 14 H HO3 GOL . . . E 2 8.151 29.594 -22.849 1 98.62 0 HO3 GOL 402 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #