data_7ZJT # _model_server_result.job_id 4ah_5IVJ697xwkGhVnMZMA _model_server_result.datetime_utc '2025-04-08 09:24:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zjt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7ZJT # _exptl.entry_id 7ZJT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZJT _cell.length_a 76.81 _cell.length_b 87.416 _cell.length_c 106.182 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,H 1 1,3 B,G,I 1 2,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_775 -x+2,-y+2,z+1/2 -1 0 0 0 -1 0 0 0 1 153.62 174.832 53.091 3 'crystal symmetry operation' 3_756 -x+2,y,-z+3/2 -1 0 0 0 1 0 0 0 -1 153.62 0 159.273 4 'crystal symmetry operation' 4_576 x,-y+2,-z+1 1 0 0 0 -1 0 0 0 -1 0 174.832 106.182 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7ZJT _atom_sites.fract_transf_matrix[1][1] 0.013019 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01144 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 301 304 EDO EDO . D 2 EDO A 1 302 305 EDO EDO . E 3 CL A 1 303 3 CL CL . F 3 CL A 1 304 4 CL CL . G 3 CL B 1 301 2 CL CL . H 4 HOH A 1 401 77 HOH HOH . H 4 HOH A 2 402 207 HOH HOH . H 4 HOH A 3 403 105 HOH HOH . H 4 HOH A 4 404 162 HOH HOH . H 4 HOH A 5 405 178 HOH HOH . H 4 HOH A 6 406 232 HOH HOH . H 4 HOH A 7 407 58 HOH HOH . H 4 HOH A 8 408 35 HOH HOH . H 4 HOH A 9 409 112 HOH HOH . H 4 HOH A 10 410 119 HOH HOH . H 4 HOH A 11 411 69 HOH HOH . H 4 HOH A 12 412 186 HOH HOH . H 4 HOH A 13 413 42 HOH HOH . H 4 HOH A 14 414 206 HOH HOH . H 4 HOH A 15 415 190 HOH HOH . H 4 HOH A 16 416 266 HOH HOH . H 4 HOH A 17 417 44 HOH HOH . H 4 HOH A 18 418 25 HOH HOH . H 4 HOH A 19 419 301 HOH HOH . H 4 HOH A 20 420 270 HOH HOH . H 4 HOH A 21 421 74 HOH HOH . H 4 HOH A 22 422 83 HOH HOH . H 4 HOH A 23 423 268 HOH HOH . H 4 HOH A 24 424 128 HOH HOH . H 4 HOH A 25 425 66 HOH HOH . H 4 HOH A 26 426 150 HOH HOH . H 4 HOH A 27 427 12 HOH HOH . H 4 HOH A 28 428 132 HOH HOH . H 4 HOH A 29 429 28 HOH HOH . H 4 HOH A 30 430 75 HOH HOH . H 4 HOH A 31 431 179 HOH HOH . H 4 HOH A 32 432 106 HOH HOH . H 4 HOH A 33 433 33 HOH HOH . H 4 HOH A 34 434 137 HOH HOH . H 4 HOH A 35 435 54 HOH HOH . H 4 HOH A 36 436 15 HOH HOH . H 4 HOH A 37 437 152 HOH HOH . H 4 HOH A 38 438 68 HOH HOH . H 4 HOH A 39 439 67 HOH HOH . H 4 HOH A 40 440 95 HOH HOH . H 4 HOH A 41 441 39 HOH HOH . H 4 HOH A 42 442 61 HOH HOH . H 4 HOH A 43 443 31 HOH HOH . H 4 HOH A 44 444 278 HOH HOH . H 4 HOH A 45 445 37 HOH HOH . H 4 HOH A 46 446 174 HOH HOH . H 4 HOH A 47 447 21 HOH HOH . H 4 HOH A 48 448 49 HOH HOH . H 4 HOH A 49 449 48 HOH HOH . H 4 HOH A 50 450 86 HOH HOH . H 4 HOH A 51 451 161 HOH HOH . H 4 HOH A 52 452 17 HOH HOH . H 4 HOH A 53 453 214 HOH HOH . H 4 HOH A 54 454 205 HOH HOH . H 4 HOH A 55 455 13 HOH HOH . H 4 HOH A 56 456 111 HOH HOH . H 4 HOH A 57 457 90 HOH HOH . H 4 HOH A 58 458 102 HOH HOH . H 4 HOH A 59 459 63 HOH HOH . H 4 HOH A 60 460 199 HOH HOH . H 4 HOH A 61 461 194 HOH HOH . H 4 HOH A 62 462 148 HOH HOH . H 4 HOH A 63 463 79 HOH HOH . H 4 HOH A 64 464 85 HOH HOH . H 4 HOH A 65 465 88 HOH HOH . H 4 HOH A 66 466 47 HOH HOH . H 4 HOH A 67 467 5 HOH HOH . H 4 HOH A 68 468 89 HOH HOH . H 4 HOH A 69 469 84 HOH HOH . H 4 HOH A 70 470 24 HOH HOH . H 4 HOH A 71 471 93 HOH HOH . H 4 HOH A 72 472 110 HOH HOH . H 4 HOH A 73 473 175 HOH HOH . H 4 HOH A 74 474 279 HOH HOH . H 4 HOH A 75 475 45 HOH HOH . H 4 HOH A 76 476 99 HOH HOH . H 4 HOH A 77 477 191 HOH HOH . H 4 HOH A 78 478 8 HOH HOH . H 4 HOH A 79 479 297 HOH HOH . H 4 HOH A 80 480 127 HOH HOH . H 4 HOH A 81 481 38 HOH HOH . H 4 HOH A 82 482 40 HOH HOH . H 4 HOH A 83 483 231 HOH HOH . H 4 HOH A 84 484 30 HOH HOH . H 4 HOH A 85 485 289 HOH HOH . H 4 HOH A 86 486 287 HOH HOH . H 4 HOH A 87 487 103 HOH HOH . H 4 HOH A 88 488 136 HOH HOH . H 4 HOH A 89 489 60 HOH HOH . H 4 HOH A 90 490 56 HOH HOH . H 4 HOH A 91 491 160 HOH HOH . H 4 HOH A 92 492 170 HOH HOH . H 4 HOH A 93 493 18 HOH HOH . H 4 HOH A 94 494 142 HOH HOH . H 4 HOH A 95 495 180 HOH HOH . H 4 HOH A 96 496 96 HOH HOH . H 4 HOH A 97 497 280 HOH HOH . H 4 HOH A 98 498 23 HOH HOH . H 4 HOH A 99 499 141 HOH HOH . H 4 HOH A 100 500 78 HOH HOH . H 4 HOH A 101 501 43 HOH HOH . H 4 HOH A 102 502 82 HOH HOH . H 4 HOH A 103 503 201 HOH HOH . H 4 HOH A 104 504 34 HOH HOH . H 4 HOH A 105 505 165 HOH HOH . H 4 HOH A 106 506 146 HOH HOH . H 4 HOH A 107 507 130 HOH HOH . H 4 HOH A 108 508 72 HOH HOH . H 4 HOH A 109 509 116 HOH HOH . H 4 HOH A 110 510 10 HOH HOH . H 4 HOH A 111 511 76 HOH HOH . H 4 HOH A 112 512 123 HOH HOH . H 4 HOH A 113 513 113 HOH HOH . H 4 HOH A 114 514 4 HOH HOH . H 4 HOH A 115 515 52 HOH HOH . H 4 HOH A 116 516 252 HOH HOH . H 4 HOH A 117 517 176 HOH HOH . H 4 HOH A 118 518 188 HOH HOH . H 4 HOH A 119 519 73 HOH HOH . H 4 HOH A 120 520 64 HOH HOH . H 4 HOH A 121 521 163 HOH HOH . H 4 HOH A 122 522 173 HOH HOH . H 4 HOH A 123 523 155 HOH HOH . H 4 HOH A 124 524 41 HOH HOH . H 4 HOH A 125 525 195 HOH HOH . H 4 HOH A 126 526 212 HOH HOH . H 4 HOH A 127 527 156 HOH HOH . H 4 HOH A 128 528 159 HOH HOH . H 4 HOH A 129 529 115 HOH HOH . H 4 HOH A 130 530 7 HOH HOH . H 4 HOH A 131 531 196 HOH HOH . H 4 HOH A 132 532 226 HOH HOH . H 4 HOH A 133 533 143 HOH HOH . H 4 HOH A 134 534 217 HOH HOH . H 4 HOH A 135 535 228 HOH HOH . H 4 HOH A 136 536 166 HOH HOH . H 4 HOH A 137 537 202 HOH HOH . H 4 HOH A 138 538 213 HOH HOH . H 4 HOH A 139 539 91 HOH HOH . H 4 HOH A 140 540 223 HOH HOH . H 4 HOH A 141 541 203 HOH HOH . H 4 HOH A 142 542 211 HOH HOH . H 4 HOH A 143 543 97 HOH HOH . H 4 HOH A 144 544 138 HOH HOH . H 4 HOH A 145 545 184 HOH HOH . H 4 HOH A 146 546 220 HOH HOH . H 4 HOH A 147 547 216 HOH HOH . H 4 HOH A 148 548 172 HOH HOH . H 4 HOH A 149 549 218 HOH HOH . H 4 HOH A 150 550 122 HOH HOH . H 4 HOH A 151 551 219 HOH HOH . H 4 HOH A 152 552 94 HOH HOH . H 4 HOH A 153 553 222 HOH HOH . I 4 HOH B 1 401 158 HOH HOH . I 4 HOH B 2 402 200 HOH HOH . I 4 HOH B 3 403 198 HOH HOH . I 4 HOH B 4 404 276 HOH HOH . I 4 HOH B 5 405 257 HOH HOH . I 4 HOH B 6 406 147 HOH HOH . I 4 HOH B 7 407 310 HOH HOH . I 4 HOH B 8 408 169 HOH HOH . I 4 HOH B 9 409 264 HOH HOH . I 4 HOH B 10 410 168 HOH HOH . I 4 HOH B 11 411 296 HOH HOH . I 4 HOH B 12 412 107 HOH HOH . I 4 HOH B 13 413 234 HOH HOH . I 4 HOH B 14 414 294 HOH HOH . I 4 HOH B 15 415 269 HOH HOH . I 4 HOH B 16 416 118 HOH HOH . I 4 HOH B 17 417 164 HOH HOH . I 4 HOH B 18 418 295 HOH HOH . I 4 HOH B 19 419 258 HOH HOH . I 4 HOH B 20 420 126 HOH HOH . I 4 HOH B 21 421 62 HOH HOH . I 4 HOH B 22 422 241 HOH HOH . I 4 HOH B 23 423 46 HOH HOH . I 4 HOH B 24 424 247 HOH HOH . I 4 HOH B 25 425 16 HOH HOH . I 4 HOH B 26 426 167 HOH HOH . I 4 HOH B 27 427 50 HOH HOH . I 4 HOH B 28 428 51 HOH HOH . I 4 HOH B 29 429 265 HOH HOH . I 4 HOH B 30 430 274 HOH HOH . I 4 HOH B 31 431 290 HOH HOH . I 4 HOH B 32 432 237 HOH HOH . I 4 HOH B 33 433 65 HOH HOH . I 4 HOH B 34 434 263 HOH HOH . I 4 HOH B 35 435 133 HOH HOH . I 4 HOH B 36 436 121 HOH HOH . I 4 HOH B 37 437 243 HOH HOH . I 4 HOH B 38 438 261 HOH HOH . I 4 HOH B 39 439 193 HOH HOH . I 4 HOH B 40 440 286 HOH HOH . I 4 HOH B 41 441 262 HOH HOH . I 4 HOH B 42 442 70 HOH HOH . I 4 HOH B 43 443 120 HOH HOH . I 4 HOH B 44 444 251 HOH HOH . I 4 HOH B 45 445 124 HOH HOH . I 4 HOH B 46 446 300 HOH HOH . I 4 HOH B 47 447 273 HOH HOH . I 4 HOH B 48 448 117 HOH HOH . I 4 HOH B 49 449 282 HOH HOH . I 4 HOH B 50 450 238 HOH HOH . I 4 HOH B 51 451 104 HOH HOH . I 4 HOH B 52 452 11 HOH HOH . I 4 HOH B 53 453 157 HOH HOH . I 4 HOH B 54 454 239 HOH HOH . I 4 HOH B 55 455 255 HOH HOH . I 4 HOH B 56 456 181 HOH HOH . I 4 HOH B 57 457 81 HOH HOH . I 4 HOH B 58 458 254 HOH HOH . I 4 HOH B 59 459 27 HOH HOH . I 4 HOH B 60 460 185 HOH HOH . I 4 HOH B 61 461 59 HOH HOH . I 4 HOH B 62 462 22 HOH HOH . I 4 HOH B 63 463 29 HOH HOH . I 4 HOH B 64 464 259 HOH HOH . I 4 HOH B 65 465 267 HOH HOH . I 4 HOH B 66 466 26 HOH HOH . I 4 HOH B 67 467 242 HOH HOH . I 4 HOH B 68 468 248 HOH HOH . I 4 HOH B 69 469 260 HOH HOH . I 4 HOH B 70 470 235 HOH HOH . I 4 HOH B 71 471 256 HOH HOH . I 4 HOH B 72 472 246 HOH HOH . I 4 HOH B 73 473 302 HOH HOH . I 4 HOH B 74 474 55 HOH HOH . I 4 HOH B 75 475 298 HOH HOH . I 4 HOH B 76 476 192 HOH HOH . I 4 HOH B 77 477 292 HOH HOH . I 4 HOH B 78 478 275 HOH HOH . I 4 HOH B 79 479 101 HOH HOH . I 4 HOH B 80 480 277 HOH HOH . I 4 HOH B 81 481 36 HOH HOH . I 4 HOH B 82 482 236 HOH HOH . I 4 HOH B 83 483 114 HOH HOH . I 4 HOH B 84 484 9 HOH HOH . I 4 HOH B 85 485 288 HOH HOH . I 4 HOH B 86 486 240 HOH HOH . I 4 HOH B 87 487 283 HOH HOH . I 4 HOH B 88 488 189 HOH HOH . I 4 HOH B 89 489 57 HOH HOH . I 4 HOH B 90 490 14 HOH HOH . I 4 HOH B 91 491 154 HOH HOH . I 4 HOH B 92 492 291 HOH HOH . I 4 HOH B 93 493 197 HOH HOH . I 4 HOH B 94 494 187 HOH HOH . I 4 HOH B 95 495 125 HOH HOH . I 4 HOH B 96 496 153 HOH HOH . I 4 HOH B 97 497 135 HOH HOH . I 4 HOH B 98 498 80 HOH HOH . I 4 HOH B 99 499 140 HOH HOH . I 4 HOH B 100 500 139 HOH HOH . I 4 HOH B 101 501 249 HOH HOH . I 4 HOH B 102 502 149 HOH HOH . I 4 HOH B 103 503 221 HOH HOH . I 4 HOH B 104 504 284 HOH HOH . I 4 HOH B 105 505 281 HOH HOH . I 4 HOH B 106 506 250 HOH HOH . I 4 HOH B 107 507 109 HOH HOH . I 4 HOH B 108 508 20 HOH HOH . I 4 HOH B 109 509 87 HOH HOH . I 4 HOH B 110 510 244 HOH HOH . I 4 HOH B 111 511 71 HOH HOH . I 4 HOH B 112 512 183 HOH HOH . I 4 HOH B 113 513 92 HOH HOH . I 4 HOH B 114 514 100 HOH HOH . I 4 HOH B 115 515 209 HOH HOH . I 4 HOH B 116 516 253 HOH HOH . I 4 HOH B 117 517 53 HOH HOH . I 4 HOH B 118 518 131 HOH HOH . I 4 HOH B 119 519 306 HOH HOH . I 4 HOH B 120 520 134 HOH HOH . I 4 HOH B 121 521 108 HOH HOH . I 4 HOH B 122 522 98 HOH HOH . I 4 HOH B 123 523 303 HOH HOH . I 4 HOH B 124 524 2 HOH HOH . I 4 HOH B 125 525 210 HOH HOH . I 4 HOH B 126 526 308 HOH HOH . I 4 HOH B 127 527 144 HOH HOH . I 4 HOH B 128 528 309 HOH HOH . I 4 HOH B 129 529 215 HOH HOH . I 4 HOH B 130 530 299 HOH HOH . I 4 HOH B 131 531 285 HOH HOH . I 4 HOH B 132 532 224 HOH HOH . I 4 HOH B 133 533 304 HOH HOH . I 4 HOH B 134 534 271 HOH HOH . I 4 HOH B 135 535 272 HOH HOH . I 4 HOH B 136 536 245 HOH HOH . I 4 HOH B 137 537 129 HOH HOH . I 4 HOH B 138 538 229 HOH HOH . I 4 HOH B 139 539 145 HOH HOH . I 4 HOH B 140 540 305 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 98.943 72.164 84.486 1 38.34 ? C1 EDO 301 A 1 HETATM 2 O O1 EDO . . . C 2 99.402 71.467 85.635 1 39.34 ? O1 EDO 301 A 1 HETATM 3 C C2 EDO . . . C 2 99.359 71.47 83.26 1 37.48 ? C2 EDO 301 A 1 HETATM 4 O O2 EDO . . . C 2 99.032 72.176 82.095 1 41.91 ? O2 EDO 301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #