data_7ZKQ # _model_server_result.job_id bbd2bRdyoHW2s7FSuUqnWw _model_server_result.datetime_utc '2025-02-05 11:59:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zkq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 7ZKQ # _exptl.entry_id 7ZKQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 622.834 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIUNDECYL PHOSPHATIDYL CHOLINE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZKQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZKQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id FME _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_auth_asym_id 2 _struct_conn.ptnr1_auth_comp_id FME _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id LEU _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_auth_asym_id 2 _struct_conn.ptnr2_auth_comp_id LEU _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.329 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C32 H65 N O8 P 1' _chem_comp.formula_weight 622.834 _chem_comp.id PLC _chem_comp.mon_nstd_flag . _chem_comp.name 'DIUNDECYL PHOSPHATIDYL CHOLINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PLC sing 694 n n C1 O3P PLC sing 695 n n C1 H11 PLC sing 696 n n C1 H12 PLC sing 697 n n C2 C3 PLC sing 698 n n C2 O2 PLC sing 699 n n C2 H2 PLC sing 700 n n C3 O3 PLC sing 701 n n C3 H31 PLC sing 702 n n C3 H32 PLC sing 703 n n C4 C5 PLC sing 704 n n C4 O4P PLC sing 705 n n C4 H41 PLC sing 706 n n C4 H42 PLC sing 707 n n C5 N PLC sing 708 n n C5 H51 PLC sing 709 n n C5 H52 PLC sing 710 n n C6 N PLC sing 711 n n C6 H61 PLC sing 712 n n C6 H62 PLC sing 713 n n C6 H63 PLC sing 714 n n C7 N PLC sing 715 n n C7 H71 PLC sing 716 n n C7 H72 PLC sing 717 n n C7 H73 PLC sing 718 n n C8 N PLC sing 719 n n C8 H81 PLC sing 720 n n C8 H82 PLC sing 721 n n C8 H83 PLC sing 722 n n C' C1' PLC sing 723 n n C' O' PLC doub 724 n n C' O2 PLC sing 725 n n C1' C2' PLC sing 726 n n C1' "H1'1" PLC sing 727 n n C1' "H1'2" PLC sing 728 n n C2' C3' PLC sing 729 n n C2' "H2'1" PLC sing 730 n n C2' "H2'2" PLC sing 731 n n C3' C4' PLC sing 732 n n C3' "H3'1" PLC sing 733 n n C3' "H3'2" PLC sing 734 n n C4' C5' PLC sing 735 n n C4' "H4'1" PLC sing 736 n n C4' "H4'2" PLC sing 737 n n C5' C6' PLC sing 738 n n C5' "H5'1" PLC sing 739 n n C5' "H5'2" PLC sing 740 n n C6' C7' PLC sing 741 n n C6' "H6'1" PLC sing 742 n n C6' "H6'2" PLC sing 743 n n C7' C8' PLC sing 744 n n C7' "H7'1" PLC sing 745 n n C7' "H7'2" PLC sing 746 n n C8' C9' PLC sing 747 n n C8' "H8'1" PLC sing 748 n n C8' "H8'2" PLC sing 749 n n C9' CA' PLC sing 750 n n C9' "H9'1" PLC sing 751 n n C9' "H9'2" PLC sing 752 n n CA' CB' PLC sing 753 n n CA' "HT'1" PLC sing 754 n n CA' "HT'2" PLC sing 755 n n CB' "HE'1" PLC sing 756 n n CB' "HE'2" PLC sing 757 n n CB' "HE'3" PLC sing 758 n n CB C1B PLC sing 759 n n CB OB PLC doub 760 n n CB O3 PLC sing 761 n n C1B C2B PLC sing 762 n n C1B H1A1 PLC sing 763 n n C1B H1A2 PLC sing 764 n n C2B C3B PLC sing 765 n n C2B H2A1 PLC sing 766 n n C2B H2A2 PLC sing 767 n n C3B C4B PLC sing 768 n n C3B H3A1 PLC sing 769 n n C3B H3A2 PLC sing 770 n n C4B C5B PLC sing 771 n n C4B H4A1 PLC sing 772 n n C4B H4A2 PLC sing 773 n n C5B C6B PLC sing 774 n n C5B H5A1 PLC sing 775 n n C5B H5A2 PLC sing 776 n n C6B C7B PLC sing 777 n n C6B H6A1 PLC sing 778 n n C6B H6A2 PLC sing 779 n n C7B C8B PLC sing 780 n n C7B H7A1 PLC sing 781 n n C7B H7A2 PLC sing 782 n n C8B C9B PLC sing 783 n n C8B H8A1 PLC sing 784 n n C8B H8A2 PLC sing 785 n n C9B CAA PLC sing 786 n n C9B H9A1 PLC sing 787 n n C9B H9A2 PLC sing 788 n n CAA CBA PLC sing 789 n n CAA HTA1 PLC sing 790 n n CAA HTA2 PLC sing 791 n n CBA HEA1 PLC sing 792 n n CBA HEA2 PLC sing 793 n n CBA HEA3 PLC sing 794 n n O1P P PLC doub 795 n n O2P P PLC sing 796 n n O2P HOP2 PLC sing 797 n n O3P P PLC sing 798 n n O4P P PLC sing 799 n n # _atom_sites.entry_id 7ZKQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CDL b 1 101 101 CDL CDL . G 7 LMN C 1 901 901 LMN LMN . H 8 PLC T 1 401 401 PLC PLC . I 6 CDL T 1 402 402 CDL CDL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLC . . . H 8 119.534 135.135 139.28 1 37.34 ? C1 PLC 401 T 1 HETATM 2 C C2 PLC . . . H 8 119.222 136.603 139.132 1 37.34 ? C2 PLC 401 T 1 HETATM 3 C C3 PLC . . . H 8 120.444 137.49 139.2 1 37.34 ? C3 PLC 401 T 1 HETATM 4 C C4 PLC . . . H 8 122.002 134.409 140.759 1 37.34 ? C4 PLC 401 T 1 HETATM 5 C C5 PLC . . . H 8 123.131 133.579 140.213 1 37.34 ? C5 PLC 401 T 1 HETATM 6 C C6 PLC . . . H 8 125.063 132.121 140.622 1 37.34 ? C6 PLC 401 T 1 HETATM 7 C C7 PLC . . . H 8 123.073 131.842 141.963 1 37.34 ? C7 PLC 401 T 1 HETATM 8 C C8 PLC . . . H 8 124.465 133.795 142.246 1 37.34 ? C8 PLC 401 T 1 HETATM 9 C C' PLC . . . H 8 117.257 136.262 137.816 1 37.34 ? C' PLC 401 T 1 HETATM 10 C C1' PLC . . . H 8 116.706 136.26 136.425 1 37.34 ? C1' PLC 401 T 1 HETATM 11 C C2' PLC . . . H 8 116.418 137.625 135.898 1 37.34 ? C2' PLC 401 T 1 HETATM 12 C C3' PLC . . . H 8 115.158 138.224 136.489 1 37.34 ? C3' PLC 401 T 1 HETATM 13 C C4' PLC . . . H 8 113.922 137.395 136.277 1 37.34 ? C4' PLC 401 T 1 HETATM 14 C C5' PLC . . . H 8 113.859 136.721 134.93 1 37.34 ? C5' PLC 401 T 1 HETATM 15 C C6' PLC . . . H 8 112.528 136.087 134.596 1 37.34 ? C6' PLC 401 T 1 HETATM 16 C C7' PLC . . . H 8 111.484 137.062 134.115 1 37.34 ? C7' PLC 401 T 1 HETATM 17 C C8' PLC . . . H 8 111.988 138.022 133.068 1 37.34 ? C8' PLC 401 T 1 HETATM 18 C C9' PLC . . . H 8 112.687 137.363 131.907 1 37.34 ? C9' PLC 401 T 1 HETATM 19 C CA' PLC . . . H 8 113.395 138.305 130.973 1 37.34 ? CA' PLC 401 T 1 HETATM 20 C CB' PLC . . . H 8 114.167 137.606 129.881 1 37.34 ? CB' PLC 401 T 1 HETATM 21 C CB PLC . . . H 8 120.422 139.429 137.866 1 37.34 ? CB PLC 401 T 1 HETATM 22 C C1B PLC . . . H 8 119.166 139.806 138.593 1 37.34 ? C1B PLC 401 T 1 HETATM 23 C C2B PLC . . . H 8 118.626 141.131 138.165 1 37.34 ? C2B PLC 401 T 1 HETATM 24 C C3B PLC . . . H 8 118.002 141.073 136.784 1 37.34 ? C3B PLC 401 T 1 HETATM 25 C C4B PLC . . . H 8 118.146 142.334 135.976 1 37.34 ? C4B PLC 401 T 1 HETATM 26 C C5B PLC . . . H 8 117.289 142.367 134.733 1 37.34 ? C5B PLC 401 T 1 HETATM 27 C C6B PLC . . . H 8 117.593 143.51 133.798 1 37.34 ? C6B PLC 401 T 1 HETATM 28 C C7B PLC . . . H 8 116.489 143.83 132.821 1 37.34 ? C7B PLC 401 T 1 HETATM 29 C C8B PLC . . . H 8 115.286 144.495 133.448 1 37.34 ? C8B PLC 401 T 1 HETATM 30 C C9B PLC . . . H 8 114.313 145.105 132.463 1 37.34 ? C9B PLC 401 T 1 HETATM 31 C CAA PLC . . . H 8 113.527 144.122 131.63 1 37.34 ? CAA PLC 401 T 1 HETATM 32 C CBA PLC . . . H 8 112.45 144.756 130.783 1 37.34 ? CBA PLC 401 T 1 HETATM 33 O O' PLC . . . H 8 116.679 135.821 138.773 1 37.34 ? O' PLC 401 T 1 HETATM 34 O OB PLC . . . H 8 121.106 140.199 137.256 1 37.34 ? OB PLC 401 T 1 HETATM 35 O O2 PLC . . . H 8 118.489 136.786 137.894 1 37.34 ? O2 PLC 401 T 1 HETATM 36 O O3 PLC . . . H 8 120.662 138.125 137.924 1 37.34 ? O3 PLC 401 T 1 HETATM 37 O O1P PLC . . . H 8 118.812 133.012 142.372 1 37.34 ? O1P PLC 401 T 1 HETATM 38 O O2P PLC . . . H 8 119.855 135.382 142.512 1 37.34 ? O2P PLC 401 T 1 HETATM 39 O O3P PLC . . . H 8 118.796 134.593 140.407 1 37.34 ? O3P PLC 401 T 1 HETATM 40 O O4P PLC . . . H 8 120.938 133.52 141.17 1 37.34 ? O4P PLC 401 T 1 HETATM 41 N N PLC . . . H 8 123.927 132.832 141.258 1 37.34 ? N PLC 401 T 1 HETATM 42 P P PLC . . . H 8 119.572 134.134 141.731 1 37.34 ? P PLC 401 T 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 42 #