data_7ZKR # _model_server_result.job_id mU2spJV63_CcuVLV1yvtNw _model_server_result.datetime_utc '2024-10-13 14:27:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zkr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7ZKR # _exptl.entry_id 7ZKR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZKR _cell.length_a 99.03 _cell.length_b 99.03 _cell.length_c 99.03 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZKR _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall 'I 2 2 3' _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ALA 3 B ALA 2 1_555 B N LE1 4 B LE1 3 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 B C ALA 3 B ALA 2 1_555 B N LE1 4 B LE1 3 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C LE1 4 B LE1 3 1_555 B N TYR 5 B TYR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B SG LE1 4 B LE1 3 1_555 G C2' OXE . B OXE 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? covale ? covale5 B SG CYS 9 B CYS 8 1_555 G C1' OXE . B OXE 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? covale ? covale6 B C PRO 13 B PRO 12 1_555 B N NH2 14 B NH2 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 305 n n P O2 PO4 sing 306 n n P O3 PO4 sing 307 n n P O4 PO4 sing 308 n n # _atom_sites.entry_id 7ZKR _atom_sites.fract_transf_matrix[1][1] 0.010098 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010098 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010098 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 201 201 PO4 PO4 . D 3 PO4 A 1 202 202 PO4 PO4 . E 3 PO4 A 1 203 203 PO4 PO4 . F 4 CL B 1 101 211 CL CL . G 5 OXE B 1 102 101 OXE OXE . H 6 HOH A 1 301 189 HOH HOH . H 6 HOH A 2 302 49 HOH HOH . H 6 HOH A 3 303 172 HOH HOH . H 6 HOH A 4 304 88 HOH HOH . H 6 HOH A 5 305 81 HOH HOH . H 6 HOH A 6 306 165 HOH HOH . H 6 HOH A 7 307 178 HOH HOH . H 6 HOH A 8 308 167 HOH HOH . H 6 HOH A 9 309 186 HOH HOH . H 6 HOH A 10 310 61 HOH HOH . H 6 HOH A 11 311 136 HOH HOH . H 6 HOH A 12 312 32 HOH HOH . H 6 HOH A 13 313 101 HOH HOH . H 6 HOH A 14 314 150 HOH HOH . H 6 HOH A 15 315 43 HOH HOH . H 6 HOH A 16 316 28 HOH HOH . H 6 HOH A 17 317 114 HOH HOH . H 6 HOH A 18 318 202 HOH HOH . H 6 HOH A 19 319 107 HOH HOH . H 6 HOH A 20 320 179 HOH HOH . H 6 HOH A 21 321 170 HOH HOH . H 6 HOH A 22 322 26 HOH HOH . H 6 HOH A 23 323 55 HOH HOH . H 6 HOH A 24 324 110 HOH HOH . H 6 HOH A 25 325 53 HOH HOH . H 6 HOH A 26 326 46 HOH HOH . H 6 HOH A 27 327 33 HOH HOH . H 6 HOH A 28 328 134 HOH HOH . H 6 HOH A 29 329 73 HOH HOH . H 6 HOH A 30 330 195 HOH HOH . H 6 HOH A 31 331 159 HOH HOH . H 6 HOH A 32 332 71 HOH HOH . H 6 HOH A 33 333 41 HOH HOH . H 6 HOH A 34 334 203 HOH HOH . H 6 HOH A 35 335 140 HOH HOH . H 6 HOH A 36 336 109 HOH HOH . H 6 HOH A 37 337 20 HOH HOH . H 6 HOH A 38 338 1 HOH HOH . H 6 HOH A 39 339 2 HOH HOH . H 6 HOH A 40 340 45 HOH HOH . H 6 HOH A 41 341 156 HOH HOH . H 6 HOH A 42 342 23 HOH HOH . H 6 HOH A 43 343 58 HOH HOH . H 6 HOH A 44 344 74 HOH HOH . H 6 HOH A 45 345 4 HOH HOH . H 6 HOH A 46 346 153 HOH HOH . H 6 HOH A 47 347 108 HOH HOH . H 6 HOH A 48 348 59 HOH HOH . H 6 HOH A 49 349 111 HOH HOH . H 6 HOH A 50 350 21 HOH HOH . H 6 HOH A 51 351 12 HOH HOH . H 6 HOH A 52 352 69 HOH HOH . H 6 HOH A 53 353 22 HOH HOH . H 6 HOH A 54 354 11 HOH HOH . H 6 HOH A 55 355 191 HOH HOH . H 6 HOH A 56 356 14 HOH HOH . H 6 HOH A 57 357 105 HOH HOH . H 6 HOH A 58 358 87 HOH HOH . H 6 HOH A 59 359 38 HOH HOH . H 6 HOH A 60 360 115 HOH HOH . H 6 HOH A 61 361 6 HOH HOH . H 6 HOH A 62 362 201 HOH HOH . H 6 HOH A 63 363 7 HOH HOH . H 6 HOH A 64 364 50 HOH HOH . H 6 HOH A 65 365 63 HOH HOH . H 6 HOH A 66 366 29 HOH HOH . H 6 HOH A 67 367 37 HOH HOH . H 6 HOH A 68 368 139 HOH HOH . H 6 HOH A 69 369 44 HOH HOH . H 6 HOH A 70 370 24 HOH HOH . H 6 HOH A 71 371 113 HOH HOH . H 6 HOH A 72 372 143 HOH HOH . H 6 HOH A 73 373 79 HOH HOH . H 6 HOH A 74 374 182 HOH HOH . H 6 HOH A 75 375 56 HOH HOH . H 6 HOH A 76 376 64 HOH HOH . H 6 HOH A 77 377 54 HOH HOH . H 6 HOH A 78 378 5 HOH HOH . H 6 HOH A 79 379 72 HOH HOH . H 6 HOH A 80 380 75 HOH HOH . H 6 HOH A 81 381 30 HOH HOH . H 6 HOH A 82 382 82 HOH HOH . H 6 HOH A 83 383 188 HOH HOH . H 6 HOH A 84 384 78 HOH HOH . H 6 HOH A 85 385 8 HOH HOH . H 6 HOH A 86 386 9 HOH HOH . H 6 HOH A 87 387 130 HOH HOH . H 6 HOH A 88 388 13 HOH HOH . H 6 HOH A 89 389 86 HOH HOH . H 6 HOH A 90 390 34 HOH HOH . H 6 HOH A 91 391 106 HOH HOH . H 6 HOH A 92 392 152 HOH HOH . H 6 HOH A 93 393 3 HOH HOH . H 6 HOH A 94 394 52 HOH HOH . H 6 HOH A 95 395 15 HOH HOH . H 6 HOH A 96 396 204 HOH HOH . H 6 HOH A 97 397 19 HOH HOH . H 6 HOH A 98 398 90 HOH HOH . H 6 HOH A 99 399 142 HOH HOH . H 6 HOH A 100 400 103 HOH HOH . H 6 HOH A 101 401 141 HOH HOH . H 6 HOH A 102 402 40 HOH HOH . H 6 HOH A 103 403 70 HOH HOH . H 6 HOH A 104 404 18 HOH HOH . H 6 HOH A 105 405 96 HOH HOH . H 6 HOH A 106 406 192 HOH HOH . H 6 HOH A 107 407 112 HOH HOH . H 6 HOH A 108 408 65 HOH HOH . H 6 HOH A 109 409 48 HOH HOH . H 6 HOH A 110 410 39 HOH HOH . H 6 HOH A 111 411 193 HOH HOH . H 6 HOH A 112 412 194 HOH HOH . H 6 HOH A 113 413 120 HOH HOH . H 6 HOH A 114 414 51 HOH HOH . H 6 HOH A 115 415 151 HOH HOH . H 6 HOH A 116 416 122 HOH HOH . H 6 HOH A 117 417 169 HOH HOH . H 6 HOH A 118 418 160 HOH HOH . H 6 HOH A 119 419 27 HOH HOH . H 6 HOH A 120 420 25 HOH HOH . H 6 HOH A 121 421 176 HOH HOH . H 6 HOH A 122 422 206 HOH HOH . H 6 HOH A 123 423 171 HOH HOH . H 6 HOH A 124 424 164 HOH HOH . H 6 HOH A 125 425 97 HOH HOH . H 6 HOH A 126 426 104 HOH HOH . H 6 HOH A 127 427 42 HOH HOH . H 6 HOH A 128 428 158 HOH HOH . H 6 HOH A 129 429 154 HOH HOH . H 6 HOH A 130 430 173 HOH HOH . H 6 HOH A 131 431 199 HOH HOH . H 6 HOH A 132 432 174 HOH HOH . H 6 HOH A 133 433 123 HOH HOH . H 6 HOH A 134 434 175 HOH HOH . H 6 HOH A 135 435 94 HOH HOH . H 6 HOH A 136 436 60 HOH HOH . H 6 HOH A 137 437 196 HOH HOH . H 6 HOH A 138 438 132 HOH HOH . H 6 HOH A 139 439 80 HOH HOH . H 6 HOH A 140 440 66 HOH HOH . H 6 HOH A 141 441 205 HOH HOH . H 6 HOH A 142 442 77 HOH HOH . H 6 HOH A 143 443 197 HOH HOH . H 6 HOH A 144 444 92 HOH HOH . H 6 HOH A 145 445 135 HOH HOH . H 6 HOH A 146 446 162 HOH HOH . H 6 HOH A 147 447 161 HOH HOH . H 6 HOH A 148 448 84 HOH HOH . H 6 HOH A 149 449 155 HOH HOH . H 6 HOH A 150 450 118 HOH HOH . H 6 HOH A 151 451 148 HOH HOH . H 6 HOH A 152 452 83 HOH HOH . H 6 HOH A 153 453 121 HOH HOH . H 6 HOH A 154 454 99 HOH HOH . H 6 HOH A 155 455 98 HOH HOH . H 6 HOH A 156 456 184 HOH HOH . H 6 HOH A 157 457 131 HOH HOH . H 6 HOH A 158 458 117 HOH HOH . H 6 HOH A 159 459 91 HOH HOH . H 6 HOH A 160 460 125 HOH HOH . H 6 HOH A 161 461 102 HOH HOH . H 6 HOH A 162 462 163 HOH HOH . H 6 HOH A 163 463 144 HOH HOH . H 6 HOH A 164 464 35 HOH HOH . H 6 HOH A 165 465 127 HOH HOH . H 6 HOH A 166 466 62 HOH HOH . H 6 HOH A 167 467 157 HOH HOH . H 6 HOH A 168 468 89 HOH HOH . H 6 HOH A 169 469 76 HOH HOH . H 6 HOH A 170 470 85 HOH HOH . H 6 HOH A 171 471 137 HOH HOH . H 6 HOH A 172 472 177 HOH HOH . H 6 HOH A 173 473 68 HOH HOH . H 6 HOH A 174 474 147 HOH HOH . H 6 HOH A 175 475 124 HOH HOH . H 6 HOH A 176 476 36 HOH HOH . H 6 HOH A 177 477 129 HOH HOH . H 6 HOH A 178 478 198 HOH HOH . H 6 HOH A 179 479 100 HOH HOH . H 6 HOH A 180 480 146 HOH HOH . H 6 HOH A 181 481 93 HOH HOH . H 6 HOH A 182 482 116 HOH HOH . H 6 HOH A 183 483 181 HOH HOH . H 6 HOH A 184 484 180 HOH HOH . H 6 HOH A 185 485 145 HOH HOH . H 6 HOH A 186 486 133 HOH HOH . H 6 HOH A 187 487 183 HOH HOH . I 6 HOH B 1 201 190 HOH HOH . I 6 HOH B 2 202 95 HOH HOH . I 6 HOH B 3 203 119 HOH HOH . I 6 HOH B 4 204 31 HOH HOH . I 6 HOH B 5 205 17 HOH HOH . I 6 HOH B 6 206 187 HOH HOH . I 6 HOH B 7 207 10 HOH HOH . I 6 HOH B 8 208 47 HOH HOH . I 6 HOH B 9 209 67 HOH HOH . I 6 HOH B 10 210 138 HOH HOH . I 6 HOH B 11 211 128 HOH HOH . I 6 HOH B 12 212 126 HOH HOH . I 6 HOH B 13 213 185 HOH HOH . I 6 HOH B 14 214 57 HOH HOH . I 6 HOH B 15 215 166 HOH HOH . I 6 HOH B 16 216 168 HOH HOH . I 6 HOH B 17 217 200 HOH HOH . I 6 HOH B 18 218 16 HOH HOH . I 6 HOH B 19 219 149 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 -29.469 -40.432 20.291 0.75 19.24 ? P PO4 202 A 1 HETATM 2 O O1 PO4 . . . D 3 -28.35 -41.209 19.636 0.75 24.24 ? O1 PO4 202 A 1 HETATM 3 O O2 PO4 . . . D 3 -29.387 -39.004 19.878 0.75 13.43 ? O2 PO4 202 A 1 HETATM 4 O O3 PO4 . . . D 3 -29.305 -40.505 21.783 0.75 22.92 ? O3 PO4 202 A 1 HETATM 5 O O4 PO4 . . . D 3 -30.796 -41.026 19.896 0.75 23.33 ? O4 PO4 202 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #