data_7ZKW # _model_server_result.job_id -7DHNnNnzn9VF5zp_hgpQA _model_server_result.datetime_utc '2025-03-06 20:52:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zkw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 7ZKW # _exptl.entry_id 7ZKW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 240.3 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description L-cystine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.946 _cell.angle_gamma 90 _cell.entry_id 7ZKW _cell.length_a 283.372 _cell.length_b 64.065 _cell.length_c 55.443 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZKW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 22 C CYS 22 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? disulf ? disulf2 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? # _chem_comp.formula 'C6 H12 N2 O4 S2' _chem_comp.formula_weight 240.3 _chem_comp.id IYY _chem_comp.mon_nstd_flag . _chem_comp.name L-cystine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2R)-2-azanyl-3-[[(2R)-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]disulfanyl]propanoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA IYY sing 171 n n S1 SG IYY sing 172 n n S1 C3 IYY sing 173 n n O3 C5 IYY sing 174 n n SG C1 IYY sing 175 n n CA C1 IYY sing 176 n n CA CB IYY sing 177 n n C5 C4 IYY sing 178 n n C5 O2 IYY doub 179 n n C4 C3 IYY sing 180 n n C4 N1 IYY sing 181 n n OXT CB IYY sing 182 n n CB O IYY doub 183 n n CA HA IYY sing 184 n n O3 H9 IYY sing 185 n n C4 H1 IYY sing 186 n n N1 H10 IYY sing 187 n n N1 H11 IYY sing 188 n n C3 H8 IYY sing 189 n n C3 H7 IYY sing 190 n n C1 HB2 IYY sing 191 n n C1 HB3 IYY sing 192 n n N H2 IYY sing 193 n n N H IYY sing 194 n n OXT HXT IYY sing 195 n n # _atom_sites.entry_id 7ZKW _atom_sites.fract_transf_matrix[1][1] 0.003529 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000619 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015609 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 IYY A 1 301 301 IYY CYX . F 3 IYY B 1 301 301 IYY CYX . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA IYY . . . E 3 25.34 -1.199 17.746 1 61.48 0 CA IYY 301 A 1 HETATM 2 C CB IYY . . . E 3 25.202 0.154 18.441 1 60.19 0 CB IYY 301 A 1 HETATM 3 O O3 IYY . . . E 3 33.296 -3.274 17.457 1 57.52 0 O3 IYY 301 A 1 HETATM 4 C C4 IYY . . . E 3 31.363 -4.529 17.957 1 59 0 C4 IYY 301 A 1 HETATM 5 C C5 IYY . . . E 3 32.054 -3.172 17.868 1 60.84 0 C5 IYY 301 A 1 HETATM 6 O O2 IYY . . . E 3 31.475 -2.099 18.167 1 62.9 0 O2 IYY 301 A 1 HETATM 7 N N1 IYY . . . E 3 32.079 -5.41 18.895 1 57.43 0 N1 IYY 301 A 1 HETATM 8 C C3 IYY . . . E 3 29.902 -4.297 18.358 1 57.72 0 C3 IYY 301 A 1 HETATM 9 S S1 IYY . . . E 3 29.055 -3.133 17.252 1 56.74 0 S1 IYY 301 A 1 HETATM 10 S SG IYY . . . E 3 27.09 -3.499 17.667 1 61.51 0 SG IYY 301 A 1 HETATM 11 C C1 IYY . . . E 3 26.654 -1.822 18.208 1 61.75 0 C1 IYY 301 A 1 HETATM 12 N N IYY . . . E 3 25.269 -1.059 16.273 1 60.49 0 N IYY 301 A 1 HETATM 13 O O IYY . . . E 3 26.06 0.627 19.172 1 57.65 0 O IYY 301 A 1 HETATM 14 O OXT IYY . . . E 3 24.067 0.746 18.159 1 57.88 0 OXT IYY 301 A 1 HETATM 15 H HA IYY . . . E 3 24.501 -1.824 18.055 1 61.09 0 HA IYY 301 A 1 HETATM 16 H H9 IYY . . . E 3 33.75 -2.393 17.398 1 58.58 0 H9 IYY 301 A 1 HETATM 17 H H1 IYY . . . E 3 31.398 -4.99 16.971 1 58.81 0 H1 IYY 301 A 1 HETATM 18 H H10 IYY . . . E 3 33.07 -5.635 18.767 1 57.91 0 H10 IYY 301 A 1 HETATM 19 H H11 IYY . . . E 3 31.79 -5.213 20.119 1 57.91 0 H11 IYY 301 A 1 HETATM 20 H H8 IYY . . . E 3 29.327 -5.218 18.454 1 57.82 0 H8 IYY 301 A 1 HETATM 21 H H7 IYY . . . E 3 29.836 -3.807 19.34 1 57.81 0 H7 IYY 301 A 1 HETATM 22 H HB2 IYY . . . E 3 27.422 -1.186 17.787 1 61.59 0 HB2 IYY 301 A 1 HETATM 23 H HB3 IYY . . . E 3 26.798 -1.785 19.299 1 61.58 0 HB3 IYY 301 A 1 HETATM 24 H H2 IYY . . . E 3 26.123 -0.013 15.819 1 60.77 0 H2 IYY 301 A 1 HETATM 25 H H IYY . . . E 3 25.672 -1.843 15.672 1 60.77 0 H IYY 301 A 1 HETATM 26 H HXT IYY . . . E 3 23.965 1.61 18.621 0 32.9 0 HXT IYY 301 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #