data_7ZLN # _model_server_result.job_id WDhBBlS1Ali66f2jQ4jLUw _model_server_result.datetime_utc '2024-11-15 18:20:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zln # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7ZLN # _exptl.entry_id 7ZLN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 518.446 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-[(2~{S})-3-[(4-fluoranyl-3-methyl-phenyl)methylamino]-2-[2-(4-fluorophenyl)ethanoylamino]-3-oxidanylidene-propyl]phenyl] dihydrogen phosphate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.941 _cell.angle_gamma 90 _cell.entry_id 7ZLN _cell.length_a 56.687 _cell.length_b 52.258 _cell.length_c 77.491 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZLN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H25 F2 N2 O6 P' _chem_comp.formula_weight 518.446 _chem_comp.id JI9 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-[(2~{S})-3-[(4-fluoranyl-3-methyl-phenyl)methylamino]-2-[2-(4-fluorophenyl)ethanoylamino]-3-oxidanylidene-propyl]phenyl] dihydrogen phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F08 C07 JI9 sing 173 n n C06 C07 JI9 doub 174 n y C06 C05 JI9 sing 175 n y C07 C09 JI9 sing 176 n y C05 C04 JI9 doub 177 n y C09 C10 JI9 doub 178 n y C04 C10 JI9 sing 179 n y C04 C03 JI9 sing 180 n n C03 C02 JI9 sing 181 n n C02 O01 JI9 doub 182 n n C02 N11 JI9 sing 183 n n N11 C12 JI9 sing 184 n n C12 C13 JI9 sing 185 n n C12 C25 JI9 sing 186 n n C36 C35 JI9 doub 187 n y C36 C26 JI9 sing 188 n y C35 C29 JI9 sing 189 n y O24 C13 JI9 doub 190 n n C13 N14 JI9 sing 191 n n C22 C21 JI9 sing 192 n n C23 C21 JI9 doub 193 n y C23 C16 JI9 sing 194 n y C25 C26 JI9 sing 195 n n N14 C15 JI9 sing 196 n n C26 C27 JI9 doub 197 n y C29 O30 JI9 sing 198 n n C29 C28 JI9 doub 199 n y C21 C19 JI9 sing 200 n y O30 P31 JI9 sing 201 n n C15 C16 JI9 sing 202 n n C16 C17 JI9 doub 203 n y C27 C28 JI9 sing 204 n y O33 P31 JI9 doub 205 n n C19 F20 JI9 sing 206 n n C19 C18 JI9 doub 207 n y P31 O32 JI9 sing 208 n n P31 O34 JI9 sing 209 n n C17 C18 JI9 sing 210 n y C10 H1 JI9 sing 211 n n C15 H2 JI9 sing 212 n n C15 H3 JI9 sing 213 n n C17 H4 JI9 sing 214 n n C22 H5 JI9 sing 215 n n C22 H6 JI9 sing 216 n n C22 H7 JI9 sing 217 n n C28 H8 JI9 sing 218 n n C03 H9 JI9 sing 219 n n C03 H10 JI9 sing 220 n n C05 H11 JI9 sing 221 n n C06 H12 JI9 sing 222 n n C09 H13 JI9 sing 223 n n C12 H14 JI9 sing 224 n n C18 H15 JI9 sing 225 n n C23 H16 JI9 sing 226 n n C25 H17 JI9 sing 227 n n C25 H18 JI9 sing 228 n n C27 H19 JI9 sing 229 n n C35 H20 JI9 sing 230 n n C36 H21 JI9 sing 231 n n N11 H22 JI9 sing 232 n n N14 H23 JI9 sing 233 n n O32 H24 JI9 sing 234 n n O34 H25 JI9 sing 235 n n # _atom_sites.entry_id 7ZLN _atom_sites.fract_transf_matrix[1][1] 0.017641 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005712 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019136 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 JI9 A 1 201 1 JI9 LIG . E 5 HOH A 1 301 42 HOH HOH . E 5 HOH A 2 302 11 HOH HOH . E 5 HOH A 3 303 33 HOH HOH . E 5 HOH A 4 304 35 HOH HOH . E 5 HOH A 5 305 13 HOH HOH . E 5 HOH A 6 306 21 HOH HOH . E 5 HOH A 7 307 18 HOH HOH . E 5 HOH A 8 308 14 HOH HOH . E 5 HOH A 9 309 24 HOH HOH . E 5 HOH A 10 310 2 HOH HOH . E 5 HOH A 11 311 9 HOH HOH . E 5 HOH A 12 312 23 HOH HOH . E 5 HOH A 13 313 1 HOH HOH . E 5 HOH A 14 314 39 HOH HOH . E 5 HOH A 15 315 19 HOH HOH . E 5 HOH A 16 316 32 HOH HOH . E 5 HOH A 17 317 29 HOH HOH . E 5 HOH A 18 318 38 HOH HOH . E 5 HOH A 19 319 41 HOH HOH . F 5 HOH B 1 201 37 HOH HOH . F 5 HOH B 2 202 6 HOH HOH . F 5 HOH B 3 203 3 HOH HOH . F 5 HOH B 4 204 36 HOH HOH . G 5 HOH C 1 201 34 HOH HOH . G 5 HOH C 2 202 43 HOH HOH . G 5 HOH C 3 203 7 HOH HOH . G 5 HOH C 4 204 31 HOH HOH . G 5 HOH C 5 205 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 JI9 . . . D 4 22.24 1.27 20.35 1 62.96 ? C10 JI9 201 A 1 HETATM 2 C C13 JI9 . . . D 4 20.894 5.557 25.154 1 60.4 ? C13 JI9 201 A 1 HETATM 3 C C15 JI9 . . . D 4 19.464 7.345 26.167 1 53.92 ? C15 JI9 201 A 1 HETATM 4 C C17 JI9 . . . D 4 17.671 8.637 27.369 1 65.32 ? C17 JI9 201 A 1 HETATM 5 C C21 JI9 . . . D 4 15.662 7.357 25.964 1 60.75 ? C21 JI9 201 A 1 HETATM 6 C C22 JI9 . . . D 4 14.546 6.655 25.193 1 56.04 ? C22 JI9 201 A 1 HETATM 7 C C26 JI9 . . . D 4 21.607 1.888 25.83 1 53.35 ? C26 JI9 201 A 1 HETATM 8 C C28 JI9 . . . D 4 20.413 0.082 26.87 1 53.56 ? C28 JI9 201 A 1 HETATM 9 C C02 JI9 . . . D 4 21.067 3.708 22.257 1 51.19 ? C02 JI9 201 A 1 HETATM 10 C C03 JI9 . . . D 4 21.76 3.683 20.898 1 50.58 ? C03 JI9 201 A 1 HETATM 11 C C04 JI9 . . . D 4 21.444 2.387 20.158 1 61.35 ? C04 JI9 201 A 1 HETATM 12 C C05 JI9 . . . D 4 20.354 2.328 19.305 1 59.66 ? C05 JI9 201 A 1 HETATM 13 C C06 JI9 . . . D 4 20.064 1.15 18.637 1 60.18 ? C06 JI9 201 A 1 HETATM 14 C C07 JI9 . . . D 4 20.862 0.033 18.826 1 65.37 ? C07 JI9 201 A 1 HETATM 15 C C09 JI9 . . . D 4 21.949 0.093 19.682 1 57.19 ? C09 JI9 201 A 1 HETATM 16 C C12 JI9 . . . D 4 21.122 4.107 24.729 1 47.3 ? C12 JI9 201 A 1 HETATM 17 C C16 JI9 . . . D 4 17.994 7.68 26.422 1 54.27 ? C16 JI9 201 A 1 HETATM 18 C C18 JI9 . . . D 4 16.345 8.956 27.615 1 62.74 ? C18 JI9 201 A 1 HETATM 19 C C19 JI9 . . . D 4 15.34 8.314 26.912 1 60.66 ? C19 JI9 201 A 1 HETATM 20 C C23 JI9 . . . D 4 16.988 7.038 25.717 1 54.95 ? C23 JI9 201 A 1 HETATM 21 C C25 JI9 . . . D 4 21.972 3.371 25.765 1 50.52 ? C25 JI9 201 A 1 HETATM 22 C C27 JI9 . . . D 4 20.747 1.426 26.813 1 55.29 ? C27 JI9 201 A 1 HETATM 23 C C29 JI9 . . . D 4 20.94 -0.802 25.942 1 52.41 ? C29 JI9 201 A 1 HETATM 24 C C35 JI9 . . . D 4 21.798 -0.337 24.958 1 50.71 ? C35 JI9 201 A 1 HETATM 25 C C36 JI9 . . . D 4 22.131 1.007 24.899 1 49.27 ? C36 JI9 201 A 1 HETATM 26 F F08 JI9 . . . D 4 20.577 -1.129 18.168 1 72.35 ? F08 JI9 201 A 1 HETATM 27 F F20 JI9 . . . D 4 14.033 8.625 27.152 1 56.52 ? F20 JI9 201 A 1 HETATM 28 N N11 JI9 . . . D 4 21.801 4.092 23.448 1 52.48 ? N11 JI9 201 A 1 HETATM 29 N N14 JI9 . . . D 4 19.644 5.956 25.782 1 55.41 ? N14 JI9 201 A 1 HETATM 30 O O01 JI9 . . . D 4 19.926 3.403 22.343 1 53.27 ? O01 JI9 201 A 1 HETATM 31 O O24 JI9 . . . D 4 21.741 6.364 24.965 1 61.18 ? O24 JI9 201 A 1 HETATM 32 O O30 JI9 . . . D 4 20.599 -2.161 25.996 1 47.57 ? O30 JI9 201 A 1 HETATM 33 O O32 JI9 . . . D 4 22.48 -2.634 27.715 1 57.67 -1 O32 JI9 201 A 1 HETATM 34 O O33 JI9 . . . D 4 21.201 -4.535 26.814 1 44.59 -1 O33 JI9 201 A 1 HETATM 35 O O34 JI9 . . . D 4 20.128 -2.974 28.389 1 57.11 ? O34 JI9 201 A 1 HETATM 36 P P31 JI9 . . . D 4 21.117 -3.093 27.255 1 55.65 ? P31 JI9 201 A 1 # _model_server_stats.io_time_ms 85 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #