data_7ZLR # _model_server_result.job_id 7ka8DDjG-DLcDKcWr1WALA _model_server_result.datetime_utc '2024-11-04 22:17:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zlr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7ZLR # _exptl.entry_id 7ZLR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 544.484 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-[(2~{S})-3-[(4-fluoranyl-3-prop-2-enyl-phenyl)methylamino]-2-[2-(4-fluorophenyl)ethanoylamino]-3-oxidanylidene-propyl]phenyl] dihydrogen phosphate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.269 _cell.angle_gamma 90 _cell.entry_id 7ZLR _cell.length_a 56.112 _cell.length_b 52.246 _cell.length_c 77.458 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZLR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H27 F2 N2 O6 P' _chem_comp.formula_weight 544.484 _chem_comp.id JH9 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-[(2~{S})-3-[(4-fluoranyl-3-prop-2-enyl-phenyl)methylamino]-2-[2-(4-fluorophenyl)ethanoylamino]-3-oxidanylidene-propyl]phenyl] dihydrogen phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F08 C07 JH9 sing 173 n n C09 C07 JH9 doub 174 n y C09 C10 JH9 sing 175 n y C07 C06 JH9 sing 176 n y C10 C04 JH9 doub 177 n y C06 C05 JH9 doub 178 n y C04 C05 JH9 sing 179 n y C04 C03 JH9 sing 180 n n C03 C02 JH9 sing 181 n n C02 O01 JH9 doub 182 n n C02 N11 JH9 sing 183 n n C24 C23 JH9 doub 184 n n N11 C12 JH9 sing 185 n n C23 C22 JH9 sing 186 n n C22 C21 JH9 sing 187 n n C37 C38 JH9 doub 188 n y C37 C31 JH9 sing 189 n y C38 C28 JH9 sing 190 n y C12 C13 JH9 sing 191 n n C12 C27 JH9 sing 192 n n O26 C13 JH9 doub 193 n n C13 N14 JH9 sing 194 n n C25 C21 JH9 doub 195 n y C25 C16 JH9 sing 196 n y C21 C19 JH9 sing 197 n y N14 C15 JH9 sing 198 n n C31 O32 JH9 sing 199 n n C31 C30 JH9 doub 200 n y C28 C27 JH9 sing 201 n n C28 C29 JH9 doub 202 n y O32 P33 JH9 sing 203 n n C15 C16 JH9 sing 204 n n C16 C17 JH9 doub 205 n y O36 P33 JH9 doub 206 n n C19 F20 JH9 sing 207 n n C19 C18 JH9 doub 208 n y C29 C30 JH9 sing 209 n y P33 O35 JH9 sing 210 n n P33 O34 JH9 sing 211 n n C17 C18 JH9 sing 212 n y C10 H1 JH9 sing 213 n n C15 H2 JH9 sing 214 n n C15 H3 JH9 sing 215 n n C17 H4 JH9 sing 216 n n C22 H5 JH9 sing 217 n n C22 H6 JH9 sing 218 n n C24 H7 JH9 sing 219 n n C24 H8 JH9 sing 220 n n C03 H9 JH9 sing 221 n n C03 H10 JH9 sing 222 n n C05 H11 JH9 sing 223 n n C06 H12 JH9 sing 224 n n C09 H13 JH9 sing 225 n n C12 H14 JH9 sing 226 n n C18 H15 JH9 sing 227 n n C23 H16 JH9 sing 228 n n C25 H17 JH9 sing 229 n n C27 H18 JH9 sing 230 n n C27 H19 JH9 sing 231 n n C29 H20 JH9 sing 232 n n C30 H21 JH9 sing 233 n n C37 H22 JH9 sing 234 n n C38 H23 JH9 sing 235 n n N11 H24 JH9 sing 236 n n N14 H25 JH9 sing 237 n n O34 H26 JH9 sing 238 n n O35 H27 JH9 sing 239 n n # _atom_sites.entry_id 7ZLR _atom_sites.fract_transf_matrix[1][1] 0.017821 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005883 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01914 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 JH9 A 1 201 1 JH9 LIG . E 5 HOH A 1 301 89 HOH HOH . E 5 HOH A 2 302 83 HOH HOH . E 5 HOH A 3 303 98 HOH HOH . E 5 HOH A 4 304 85 HOH HOH . E 5 HOH A 5 305 41 HOH HOH . E 5 HOH A 6 306 70 HOH HOH . E 5 HOH A 7 307 63 HOH HOH . E 5 HOH A 8 308 78 HOH HOH . E 5 HOH A 9 309 84 HOH HOH . E 5 HOH A 10 310 26 HOH HOH . E 5 HOH A 11 311 27 HOH HOH . E 5 HOH A 12 312 16 HOH HOH . E 5 HOH A 13 313 36 HOH HOH . E 5 HOH A 14 314 57 HOH HOH . E 5 HOH A 15 315 18 HOH HOH . E 5 HOH A 16 316 114 HOH HOH . E 5 HOH A 17 317 25 HOH HOH . E 5 HOH A 18 318 45 HOH HOH . E 5 HOH A 19 319 14 HOH HOH . E 5 HOH A 20 320 86 HOH HOH . E 5 HOH A 21 321 69 HOH HOH . E 5 HOH A 22 322 125 HOH HOH . E 5 HOH A 23 323 44 HOH HOH . E 5 HOH A 24 324 12 HOH HOH . E 5 HOH A 25 325 100 HOH HOH . E 5 HOH A 26 326 101 HOH HOH . E 5 HOH A 27 327 90 HOH HOH . E 5 HOH A 28 328 10 HOH HOH . E 5 HOH A 29 329 105 HOH HOH . E 5 HOH A 30 330 116 HOH HOH . E 5 HOH A 31 331 17 HOH HOH . E 5 HOH A 32 332 103 HOH HOH . E 5 HOH A 33 333 130 HOH HOH . E 5 HOH A 34 334 21 HOH HOH . E 5 HOH A 35 335 59 HOH HOH . E 5 HOH A 36 336 53 HOH HOH . E 5 HOH A 37 337 96 HOH HOH . E 5 HOH A 38 338 73 HOH HOH . E 5 HOH A 39 339 19 HOH HOH . E 5 HOH A 40 340 97 HOH HOH . E 5 HOH A 41 341 64 HOH HOH . E 5 HOH A 42 342 13 HOH HOH . E 5 HOH A 43 343 3 HOH HOH . E 5 HOH A 44 344 7 HOH HOH . E 5 HOH A 45 345 106 HOH HOH . E 5 HOH A 46 346 4 HOH HOH . E 5 HOH A 47 347 11 HOH HOH . E 5 HOH A 48 348 113 HOH HOH . E 5 HOH A 49 349 58 HOH HOH . E 5 HOH A 50 350 31 HOH HOH . E 5 HOH A 51 351 38 HOH HOH . E 5 HOH A 52 352 28 HOH HOH . E 5 HOH A 53 353 33 HOH HOH . E 5 HOH A 54 354 66 HOH HOH . E 5 HOH A 55 355 127 HOH HOH . E 5 HOH A 56 356 30 HOH HOH . E 5 HOH A 57 357 55 HOH HOH . E 5 HOH A 58 358 2 HOH HOH . E 5 HOH A 59 359 79 HOH HOH . E 5 HOH A 60 360 1 HOH HOH . E 5 HOH A 61 361 5 HOH HOH . E 5 HOH A 62 362 115 HOH HOH . E 5 HOH A 63 363 6 HOH HOH . E 5 HOH A 64 364 104 HOH HOH . E 5 HOH A 65 365 81 HOH HOH . E 5 HOH A 66 366 111 HOH HOH . E 5 HOH A 67 367 23 HOH HOH . E 5 HOH A 68 368 75 HOH HOH . E 5 HOH A 69 369 108 HOH HOH . E 5 HOH A 70 370 121 HOH HOH . E 5 HOH A 71 371 29 HOH HOH . E 5 HOH A 72 372 22 HOH HOH . E 5 HOH A 73 373 88 HOH HOH . E 5 HOH A 74 374 71 HOH HOH . E 5 HOH A 75 375 74 HOH HOH . E 5 HOH A 76 376 87 HOH HOH . E 5 HOH A 77 377 54 HOH HOH . E 5 HOH A 78 378 43 HOH HOH . F 5 HOH B 1 201 91 HOH HOH . F 5 HOH B 2 202 119 HOH HOH . F 5 HOH B 3 203 102 HOH HOH . F 5 HOH B 4 204 20 HOH HOH . F 5 HOH B 5 205 129 HOH HOH . F 5 HOH B 6 206 40 HOH HOH . F 5 HOH B 7 207 126 HOH HOH . F 5 HOH B 8 208 67 HOH HOH . F 5 HOH B 9 209 46 HOH HOH . F 5 HOH B 10 210 124 HOH HOH . F 5 HOH B 11 211 60 HOH HOH . F 5 HOH B 12 212 128 HOH HOH . F 5 HOH B 13 213 92 HOH HOH . F 5 HOH B 14 214 56 HOH HOH . F 5 HOH B 15 215 34 HOH HOH . F 5 HOH B 16 216 109 HOH HOH . F 5 HOH B 17 217 49 HOH HOH . F 5 HOH B 18 218 51 HOH HOH . F 5 HOH B 19 219 132 HOH HOH . F 5 HOH B 20 220 110 HOH HOH . F 5 HOH B 21 221 99 HOH HOH . G 5 HOH C 1 201 39 HOH HOH . G 5 HOH C 2 202 37 HOH HOH . G 5 HOH C 3 203 76 HOH HOH . G 5 HOH C 4 204 107 HOH HOH . G 5 HOH C 5 205 47 HOH HOH . G 5 HOH C 6 206 9 HOH HOH . G 5 HOH C 7 207 93 HOH HOH . G 5 HOH C 8 208 35 HOH HOH . G 5 HOH C 9 209 65 HOH HOH . G 5 HOH C 10 210 122 HOH HOH . G 5 HOH C 11 211 62 HOH HOH . G 5 HOH C 12 212 42 HOH HOH . G 5 HOH C 13 213 24 HOH HOH . G 5 HOH C 14 214 77 HOH HOH . G 5 HOH C 15 215 80 HOH HOH . G 5 HOH C 16 216 94 HOH HOH . G 5 HOH C 17 217 112 HOH HOH . G 5 HOH C 18 218 50 HOH HOH . G 5 HOH C 19 219 118 HOH HOH . G 5 HOH C 20 220 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 JH9 . . . D 4 20.099 2.511 19.893 1 39.42 ? C10 JH9 201 A 1 HETATM 2 C C13 JH9 . . . D 4 20.212 5.948 25.382 1 43.35 ? C13 JH9 201 A 1 HETATM 3 C C15 JH9 . . . D 4 18.67 7.759 26.118 1 42.81 ? C15 JH9 201 A 1 HETATM 4 C C17 JH9 . . . D 4 16.894 8.751 27.545 1 49.3 ? C17 JH9 201 A 1 HETATM 5 C C21 JH9 . . . D 4 14.848 7.834 25.873 1 49.21 ? C21 JH9 201 A 1 HETATM 6 C C22 JH9 . . . D 4 13.674 7.347 24.986 1 50.22 ? C22 JH9 201 A 1 HETATM 7 C C24 JH9 . . . D 4 11.734 8.379 23.745 1 45.46 ? C24 JH9 201 A 1 HETATM 8 C C28 JH9 . . . D 4 21.21 2.319 26.082 1 30.89 ? C28 JH9 201 A 1 HETATM 9 C C02 JH9 . . . D 4 20.672 4.051 22.658 1 38.58 ? C02 JH9 201 A 1 HETATM 10 C C03 JH9 . . . D 4 21.426 4.086 21.336 1 37.88 ? C03 JH9 201 A 1 HETATM 11 C C04 JH9 . . . D 4 21.274 2.771 20.586 1 42.56 ? C04 JH9 201 A 1 HETATM 12 C C05 JH9 . . . D 4 22.308 1.839 20.609 1 42.96 ? C05 JH9 201 A 1 HETATM 13 C C06 JH9 . . . D 4 22.173 0.638 19.924 1 41.85 ? C06 JH9 201 A 1 HETATM 14 C C07 JH9 . . . D 4 20.997 0.381 19.225 1 43.5 ? C07 JH9 201 A 1 HETATM 15 C C09 JH9 . . . D 4 19.965 1.312 19.207 1 39.69 ? C09 JH9 201 A 1 HETATM 16 C C12 JH9 . . . D 4 20.557 4.49 25.076 1 34.85 ? C12 JH9 201 A 1 HETATM 17 C C16 JH9 . . . D 4 17.198 8.025 26.408 1 46.51 ? C16 JH9 201 A 1 HETATM 18 C C18 JH9 . . . D 4 15.571 9.025 27.858 1 51 ? C18 JH9 201 A 1 HETATM 19 C C19 JH9 . . . D 4 14.563 8.568 27.024 1 48.09 ? C19 JH9 201 A 1 HETATM 20 C C23 JH9 . . . D 4 13.028 8.412 24.065 1 47.19 ? C23 JH9 201 A 1 HETATM 21 C C25 JH9 . . . D 4 16.186 7.557 25.566 1 44.78 ? C25 JH9 201 A 1 HETATM 22 C C27 JH9 . . . D 4 21.425 3.837 26.142 1 34.95 ? C27 JH9 201 A 1 HETATM 23 C C29 JH9 . . . D 4 20.486 1.737 27.1 1 30.85 ? C29 JH9 201 A 1 HETATM 24 C C30 JH9 . . . D 4 20.259 0.376 27.101 1 29.13 ? C30 JH9 201 A 1 HETATM 25 C C31 JH9 . . . D 4 20.745 -0.394 26.073 1 29.3 ? C31 JH9 201 A 1 HETATM 26 C C37 JH9 . . . D 4 21.465 0.179 25.029 1 31.83 ? C37 JH9 201 A 1 HETATM 27 C C38 JH9 . . . D 4 21.694 1.555 25.033 1 31.33 ? C38 JH9 201 A 1 HETATM 28 F F08 JH9 . . . D 4 20.846 -0.797 18.542 1 49.55 ? F08 JH9 201 A 1 HETATM 29 F F20 JH9 . . . D 4 13.271 8.842 27.353 1 54.13 ? F20 JH9 201 A 1 HETATM 30 N N11 JH9 . . . D 4 21.315 4.528 23.857 1 36.56 ? N11 JH9 201 A 1 HETATM 31 N N14 JH9 . . . D 4 18.899 6.348 25.874 1 43.38 ? N14 JH9 201 A 1 HETATM 32 O O01 JH9 . . . D 4 19.566 3.627 22.734 1 40.17 ? O01 JH9 201 A 1 HETATM 33 O O26 JH9 . . . D 4 21.02 6.787 25.177 1 46.5 ? O26 JH9 201 A 1 HETATM 34 O O32 JH9 . . . D 4 20.461 -1.753 26.093 1 28.35 ? O32 JH9 201 A 1 HETATM 35 O O34 JH9 . . . D 4 20.347 -2.302 28.659 1 24.45 -1 O34 JH9 201 A 1 HETATM 36 O O35 JH9 . . . D 4 22.466 -2.555 27.493 1 27.39 -1 O35 JH9 201 A 1 HETATM 37 O O36 JH9 . . . D 4 20.572 -4.121 26.96 1 21.91 ? O36 JH9 201 A 1 HETATM 38 P P33 JH9 . . . D 4 20.961 -2.721 27.349 1 26.6 ? P33 JH9 201 A 1 # _model_server_stats.io_time_ms 116 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 27 _model_server_stats.element_count 38 #