data_7ZOF # _model_server_result.job_id dnrxwj0ct0H25dvD5aYMeA _model_server_result.datetime_utc '2024-10-11 03:14:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zof # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":201}' # _entry.id 7ZOF # _exptl.entry_id 7ZOF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.54 _cell.angle_gamma 90 _cell.entry_id 7ZOF _cell.length_a 115.251 _cell.length_b 89.439 _cell.length_c 57.167 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZOF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 I N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E N4 JLL . A JLL 201 1_555 J FE FE . C FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc2 E N6 JLL . A JLL 201 1_555 J FE FE . C FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc3 E N7 JLL . A JLL 201 1_555 J FE FE . C FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc4 E N5 JLL . A JLL 201 1_555 J FE FE . C FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc5 F N1 IMD . A IMD 202 1_555 J FE FE . C FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc6 G N4 JLL . B JLL 201 1_555 L FE FE . D FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc7 G N6 JLL . B JLL 201 1_555 L FE FE . D FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc8 G N7 JLL . B JLL 201 1_555 L FE FE . D FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc9 G N5 JLL . B JLL 201 1_555 L FE FE . D FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc10 H N1 IMD . B IMD 202 1_555 L FE FE . D FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc11 I N1 IMD . C IMD 201 1_555 J FE FE . C FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc12 K N1 IMD . D IMD 201 1_555 L FE FE . D FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 160 n y N1 C5 IMD sing 161 n y N1 HN1 IMD sing 162 n n C2 N3 IMD doub 163 n y C2 H2 IMD sing 164 n n N3 C4 IMD sing 165 n y N3 HN3 IMD sing 166 n n C4 C5 IMD doub 167 n y C4 H4 IMD sing 168 n n C5 H5 IMD sing 169 n n # _atom_sites.entry_id 7ZOF _atom_sites.fract_transf_matrix[1][1] 0.008677 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001148 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011181 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017645 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 JLL A 1 201 201 JLL XXX . F 3 IMD A 1 202 202 IMD IMD . G 2 JLL B 1 201 201 JLL XXX . H 3 IMD B 1 202 202 IMD IMD . I 3 IMD C 1 201 203 IMD IMD . J 4 FE C 1 202 1 FE FE . K 3 IMD D 1 201 203 IMD IMD . L 4 FE D 1 202 2 FE FE . M 5 HOH A 1 301 150 HOH HOH . M 5 HOH A 2 302 135 HOH HOH . M 5 HOH A 3 303 38 HOH HOH . M 5 HOH A 4 304 82 HOH HOH . M 5 HOH A 5 305 60 HOH HOH . M 5 HOH A 6 306 62 HOH HOH . M 5 HOH A 7 307 50 HOH HOH . M 5 HOH A 8 308 105 HOH HOH . M 5 HOH A 9 309 12 HOH HOH . M 5 HOH A 10 310 111 HOH HOH . M 5 HOH A 11 311 7 HOH HOH . M 5 HOH A 12 312 84 HOH HOH . M 5 HOH A 13 313 102 HOH HOH . M 5 HOH A 14 314 34 HOH HOH . M 5 HOH A 15 315 87 HOH HOH . M 5 HOH A 16 316 81 HOH HOH . M 5 HOH A 17 317 53 HOH HOH . M 5 HOH A 18 318 132 HOH HOH . M 5 HOH A 19 319 94 HOH HOH . M 5 HOH A 20 320 90 HOH HOH . M 5 HOH A 21 321 92 HOH HOH . M 5 HOH A 22 322 144 HOH HOH . M 5 HOH A 23 323 26 HOH HOH . M 5 HOH A 24 324 91 HOH HOH . M 5 HOH A 25 325 147 HOH HOH . M 5 HOH A 26 326 45 HOH HOH . M 5 HOH A 27 327 31 HOH HOH . M 5 HOH A 28 328 115 HOH HOH . N 5 HOH B 1 301 36 HOH HOH . N 5 HOH B 2 302 40 HOH HOH . N 5 HOH B 3 303 51 HOH HOH . N 5 HOH B 4 304 80 HOH HOH . N 5 HOH B 5 305 35 HOH HOH . N 5 HOH B 6 306 112 HOH HOH . N 5 HOH B 7 307 16 HOH HOH . N 5 HOH B 8 308 114 HOH HOH . N 5 HOH B 9 309 57 HOH HOH . N 5 HOH B 10 310 15 HOH HOH . N 5 HOH B 11 311 42 HOH HOH . N 5 HOH B 12 312 134 HOH HOH . N 5 HOH B 13 313 55 HOH HOH . N 5 HOH B 14 314 10 HOH HOH . N 5 HOH B 15 315 18 HOH HOH . N 5 HOH B 16 316 130 HOH HOH . N 5 HOH B 17 317 30 HOH HOH . N 5 HOH B 18 318 68 HOH HOH . N 5 HOH B 19 319 67 HOH HOH . N 5 HOH B 20 320 11 HOH HOH . N 5 HOH B 21 321 159 HOH HOH . N 5 HOH B 22 322 88 HOH HOH . N 5 HOH B 23 323 27 HOH HOH . N 5 HOH B 24 324 93 HOH HOH . N 5 HOH B 25 325 44 HOH HOH . N 5 HOH B 26 326 20 HOH HOH . N 5 HOH B 27 327 21 HOH HOH . N 5 HOH B 28 328 77 HOH HOH . N 5 HOH B 29 329 162 HOH HOH . N 5 HOH B 30 330 156 HOH HOH . N 5 HOH B 31 331 146 HOH HOH . N 5 HOH B 32 332 119 HOH HOH . N 5 HOH B 33 333 117 HOH HOH . N 5 HOH B 34 334 71 HOH HOH . O 5 HOH C 1 301 133 HOH HOH . O 5 HOH C 2 302 139 HOH HOH . O 5 HOH C 3 303 9 HOH HOH . O 5 HOH C 4 304 143 HOH HOH . O 5 HOH C 5 305 157 HOH HOH . O 5 HOH C 6 306 152 HOH HOH . O 5 HOH C 7 307 65 HOH HOH . O 5 HOH C 8 308 52 HOH HOH . O 5 HOH C 9 309 2 HOH HOH . O 5 HOH C 10 310 32 HOH HOH . O 5 HOH C 11 311 46 HOH HOH . O 5 HOH C 12 312 39 HOH HOH . O 5 HOH C 13 313 79 HOH HOH . O 5 HOH C 14 314 99 HOH HOH . O 5 HOH C 15 315 3 HOH HOH . O 5 HOH C 16 316 58 HOH HOH . O 5 HOH C 17 317 41 HOH HOH . O 5 HOH C 18 318 109 HOH HOH . O 5 HOH C 19 319 25 HOH HOH . O 5 HOH C 20 320 89 HOH HOH . O 5 HOH C 21 321 8 HOH HOH . O 5 HOH C 22 322 43 HOH HOH . O 5 HOH C 23 323 110 HOH HOH . O 5 HOH C 24 324 78 HOH HOH . O 5 HOH C 25 325 14 HOH HOH . O 5 HOH C 26 326 47 HOH HOH . O 5 HOH C 27 327 61 HOH HOH . O 5 HOH C 28 328 70 HOH HOH . O 5 HOH C 29 329 141 HOH HOH . O 5 HOH C 30 330 85 HOH HOH . O 5 HOH C 31 331 24 HOH HOH . O 5 HOH C 32 332 6 HOH HOH . O 5 HOH C 33 333 107 HOH HOH . O 5 HOH C 34 334 73 HOH HOH . O 5 HOH C 35 335 97 HOH HOH . O 5 HOH C 36 336 124 HOH HOH . O 5 HOH C 37 337 145 HOH HOH . O 5 HOH C 38 338 136 HOH HOH . O 5 HOH C 39 339 76 HOH HOH . O 5 HOH C 40 340 138 HOH HOH . P 5 HOH D 1 301 149 HOH HOH . P 5 HOH D 2 302 160 HOH HOH . P 5 HOH D 3 303 113 HOH HOH . P 5 HOH D 4 304 153 HOH HOH . P 5 HOH D 5 305 49 HOH HOH . P 5 HOH D 6 306 158 HOH HOH . P 5 HOH D 7 307 98 HOH HOH . P 5 HOH D 8 308 17 HOH HOH . P 5 HOH D 9 309 123 HOH HOH . P 5 HOH D 10 310 101 HOH HOH . P 5 HOH D 11 311 59 HOH HOH . P 5 HOH D 12 312 64 HOH HOH . P 5 HOH D 13 313 54 HOH HOH . P 5 HOH D 14 314 154 HOH HOH . P 5 HOH D 15 315 72 HOH HOH . P 5 HOH D 16 316 22 HOH HOH . P 5 HOH D 17 317 13 HOH HOH . P 5 HOH D 18 318 28 HOH HOH . P 5 HOH D 19 319 142 HOH HOH . P 5 HOH D 20 320 69 HOH HOH . P 5 HOH D 21 321 95 HOH HOH . P 5 HOH D 22 322 161 HOH HOH . P 5 HOH D 23 323 86 HOH HOH . P 5 HOH D 24 324 83 HOH HOH . P 5 HOH D 25 325 33 HOH HOH . P 5 HOH D 26 326 103 HOH HOH . P 5 HOH D 27 327 148 HOH HOH . P 5 HOH D 28 328 63 HOH HOH . P 5 HOH D 29 329 19 HOH HOH . P 5 HOH D 30 330 66 HOH HOH . P 5 HOH D 31 331 37 HOH HOH . P 5 HOH D 32 332 155 HOH HOH . P 5 HOH D 33 333 108 HOH HOH . P 5 HOH D 34 334 127 HOH HOH . P 5 HOH D 35 335 75 HOH HOH . P 5 HOH D 36 336 116 HOH HOH . P 5 HOH D 37 337 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . K 3 26.412 -4.485 26.758 1 61.75 ? N1 IMD 201 D 1 HETATM 2 C C2 IMD . . . K 3 27.379 -4.424 27.714 1 64.52 ? C2 IMD 201 D 1 HETATM 3 N N3 IMD . . . K 3 27.045 -3.472 28.584 1 61.9 ? N3 IMD 201 D 1 HETATM 4 C C4 IMD . . . K 3 25.871 -2.913 28.183 1 64.5 ? C4 IMD 201 D 1 HETATM 5 C C5 IMD . . . K 3 25.478 -3.551 27.047 1 66.74 ? C5 IMD 201 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #