data_7ZON # _model_server_result.job_id ZAPum4vqbU9ppEt36E2MVA _model_server_result.datetime_utc '2024-10-11 00:31:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zon # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1103}' # _entry.id 7ZON # _exptl.entry_id 7ZON _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.322 _cell.angle_gamma 90 _cell.entry_id 7ZON _cell.length_a 43.082 _cell.length_b 111.97 _cell.length_c 71.306 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZON _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 85 A ILE 958 1_555 A N SNN 86 A SNN 959 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale2 A N1 SNN 86 A SNN 959 1_555 A CA GLY 87 A GLY 960 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale3 B C ILE 85 B ILE 958 1_555 B N SNN 86 B SNN 959 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale4 B N1 SNN 86 B SNN 959 1_555 B CA GLY 87 B GLY 960 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 107 n n C2 C1 BGC sing 108 n n C2 O2 BGC sing 109 n n C2 H2 BGC sing 110 n n C3 C4 BGC sing 111 n n C3 O3 BGC sing 112 n n C3 H3 BGC sing 113 n n C4 C5 BGC sing 114 n n C4 O4 BGC sing 115 n n C4 H4 BGC sing 116 n n C5 C6 BGC sing 117 n n C5 O5 BGC sing 118 n n C5 H5 BGC sing 119 n n C6 O6 BGC sing 120 n n C6 H61 BGC sing 121 n n C6 H62 BGC sing 122 n n C1 O1 BGC sing 123 n n C1 O5 BGC sing 124 n n C1 H1 BGC sing 125 n n O1 HO1 BGC sing 126 n n O2 HO2 BGC sing 127 n n O3 HO3 BGC sing 128 n n O4 HO4 BGC sing 129 n n O6 HO6 BGC sing 130 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7ZON _atom_sites.fract_transf_matrix[1][1] 0.023212 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004227 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008931 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014255 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BGC A 1 1101 1 BGC BGC . D 2 BGC A 1 1102 3 BGC BGC . E 2 BGC A 1 1103 4 BGC BGC . F 2 BGC B 1 1101 2 BGC BGC . G 3 1PE B 1 1102 1 1PE 1PE . H 4 HOH A 1 1201 73 HOH HOH . H 4 HOH A 2 1202 58 HOH HOH . H 4 HOH A 3 1203 79 HOH HOH . H 4 HOH A 4 1204 40 HOH HOH . H 4 HOH A 5 1205 60 HOH HOH . H 4 HOH A 6 1206 13 HOH HOH . H 4 HOH A 7 1207 2 HOH HOH . H 4 HOH A 8 1208 6 HOH HOH . H 4 HOH A 9 1209 95 HOH HOH . H 4 HOH A 10 1210 24 HOH HOH . H 4 HOH A 11 1211 42 HOH HOH . H 4 HOH A 12 1212 57 HOH HOH . H 4 HOH A 13 1213 18 HOH HOH . H 4 HOH A 14 1214 100 HOH HOH . H 4 HOH A 15 1215 10 HOH HOH . H 4 HOH A 16 1216 28 HOH HOH . H 4 HOH A 17 1217 16 HOH HOH . H 4 HOH A 18 1218 72 HOH HOH . H 4 HOH A 19 1219 4 HOH HOH . H 4 HOH A 20 1220 1 HOH HOH . H 4 HOH A 21 1221 41 HOH HOH . H 4 HOH A 22 1222 22 HOH HOH . H 4 HOH A 23 1223 71 HOH HOH . H 4 HOH A 24 1224 83 HOH HOH . H 4 HOH A 25 1225 67 HOH HOH . H 4 HOH A 26 1226 49 HOH HOH . H 4 HOH A 27 1227 25 HOH HOH . H 4 HOH A 28 1228 46 HOH HOH . H 4 HOH A 29 1229 84 HOH HOH . H 4 HOH A 30 1230 59 HOH HOH . H 4 HOH A 31 1231 17 HOH HOH . H 4 HOH A 32 1232 102 HOH HOH . H 4 HOH A 33 1233 53 HOH HOH . H 4 HOH A 34 1234 45 HOH HOH . H 4 HOH A 35 1235 96 HOH HOH . H 4 HOH A 36 1236 77 HOH HOH . H 4 HOH A 37 1237 48 HOH HOH . H 4 HOH A 38 1238 94 HOH HOH . H 4 HOH A 39 1239 89 HOH HOH . H 4 HOH A 40 1240 5 HOH HOH . H 4 HOH A 41 1241 3 HOH HOH . H 4 HOH A 42 1242 56 HOH HOH . H 4 HOH A 43 1243 51 HOH HOH . H 4 HOH A 44 1244 43 HOH HOH . H 4 HOH A 45 1245 80 HOH HOH . H 4 HOH A 46 1246 97 HOH HOH . H 4 HOH A 47 1247 23 HOH HOH . H 4 HOH A 48 1248 78 HOH HOH . H 4 HOH A 49 1249 90 HOH HOH . H 4 HOH A 50 1250 47 HOH HOH . H 4 HOH A 51 1251 50 HOH HOH . H 4 HOH A 52 1252 68 HOH HOH . H 4 HOH A 53 1253 98 HOH HOH . H 4 HOH A 54 1254 82 HOH HOH . H 4 HOH A 55 1255 64 HOH HOH . H 4 HOH A 56 1256 61 HOH HOH . H 4 HOH A 57 1257 91 HOH HOH . H 4 HOH A 58 1258 81 HOH HOH . H 4 HOH A 59 1259 44 HOH HOH . H 4 HOH A 60 1260 92 HOH HOH . H 4 HOH A 61 1261 9 HOH HOH . H 4 HOH A 62 1262 52 HOH HOH . H 4 HOH A 63 1263 15 HOH HOH . H 4 HOH A 64 1264 69 HOH HOH . I 4 HOH B 1 1201 75 HOH HOH . I 4 HOH B 2 1202 31 HOH HOH . I 4 HOH B 3 1203 62 HOH HOH . I 4 HOH B 4 1204 74 HOH HOH . I 4 HOH B 5 1205 38 HOH HOH . I 4 HOH B 6 1206 21 HOH HOH . I 4 HOH B 7 1207 26 HOH HOH . I 4 HOH B 8 1208 35 HOH HOH . I 4 HOH B 9 1209 99 HOH HOH . I 4 HOH B 10 1210 30 HOH HOH . I 4 HOH B 11 1211 87 HOH HOH . I 4 HOH B 12 1212 101 HOH HOH . I 4 HOH B 13 1213 39 HOH HOH . I 4 HOH B 14 1214 76 HOH HOH . I 4 HOH B 15 1215 29 HOH HOH . I 4 HOH B 16 1216 12 HOH HOH . I 4 HOH B 17 1217 34 HOH HOH . I 4 HOH B 18 1218 14 HOH HOH . I 4 HOH B 19 1219 85 HOH HOH . I 4 HOH B 20 1220 66 HOH HOH . I 4 HOH B 21 1221 19 HOH HOH . I 4 HOH B 22 1222 36 HOH HOH . I 4 HOH B 23 1223 70 HOH HOH . I 4 HOH B 24 1224 63 HOH HOH . I 4 HOH B 25 1225 37 HOH HOH . I 4 HOH B 26 1226 32 HOH HOH . I 4 HOH B 27 1227 33 HOH HOH . I 4 HOH B 28 1228 11 HOH HOH . I 4 HOH B 29 1229 8 HOH HOH . I 4 HOH B 30 1230 55 HOH HOH . I 4 HOH B 31 1231 86 HOH HOH . I 4 HOH B 32 1232 7 HOH HOH . I 4 HOH B 33 1233 20 HOH HOH . I 4 HOH B 34 1234 65 HOH HOH . I 4 HOH B 35 1235 54 HOH HOH . I 4 HOH B 36 1236 27 HOH HOH . I 4 HOH B 37 1237 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . E 2 27.767 15.815 31.09 1 41.51 ? C2 BGC 1103 A 1 HETATM 2 C C3 BGC . . . E 2 27.467 15.67 29.604 1 41.74 ? C3 BGC 1103 A 1 HETATM 3 C C4 BGC . . . E 2 28.777 15.685 28.826 1 42.82 ? C4 BGC 1103 A 1 HETATM 4 C C5 BGC . . . E 2 29.642 14.532 29.342 1 42.3 ? C5 BGC 1103 A 1 HETATM 5 C C6 BGC . . . E 2 30.986 14.407 28.635 1 47.78 ? C6 BGC 1103 A 1 HETATM 6 C C1 BGC . . . E 2 28.707 14.694 31.529 1 44.31 ? C1 BGC 1103 A 1 HETATM 7 O O1 BGC . . . E 2 29.059 14.851 32.907 1 48.97 ? O1 BGC 1103 A 1 HETATM 8 O O2 BGC . . . E 2 26.552 15.751 31.841 1 39.88 ? O2 BGC 1103 A 1 HETATM 9 O O3 BGC . . . E 2 26.583 16.712 29.177 1 40.04 ? O3 BGC 1103 A 1 HETATM 10 O O4 BGC . . . E 2 28.52 15.557 27.419 1 42.23 ? O4 BGC 1103 A 1 HETATM 11 O O5 BGC . . . E 2 29.895 14.72 30.732 1 44.81 ? O5 BGC 1103 A 1 HETATM 12 O O6 BGC . . . E 2 31.735 15.607 28.861 1 54.64 ? O6 BGC 1103 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 12 #