data_7ZOY # _model_server_result.job_id XjF1aBcRytAQYgjkvTOSOA _model_server_result.datetime_utc '2024-11-21 13:57:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zoy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":612}' # _entry.id 7ZOY # _exptl.entry_id 7ZOY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7ZOY _cell.length_a 62.3 _cell.length_b 62.3 _cell.length_c 110.14 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZOY _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall 'P 3 2"' _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 1 2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 1 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -y-1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -62.3 0 0 3 'crystal symmetry operation' 3_445 -x+y-1,-x-1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -31.15 -53.953383 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 R N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C FME 1 A FME 1 1_555 A N ALA 2 A ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C SER 204 A SER 204 1_555 A N LYR 205 A LYR 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C LYR 205 A LYR 205 1_555 A N VAL 206 A VAL 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 228 n n C1 H11 LFA sing 229 n n C1 H12 LFA sing 230 n n C1 H13 LFA sing 231 n n C2 C3 LFA sing 232 n n C2 H21 LFA sing 233 n n C2 H22 LFA sing 234 n n C3 C4 LFA sing 235 n n C3 H31 LFA sing 236 n n C3 H32 LFA sing 237 n n C4 C5 LFA sing 238 n n C4 H41 LFA sing 239 n n C4 H42 LFA sing 240 n n C5 C6 LFA sing 241 n n C5 H51 LFA sing 242 n n C5 H52 LFA sing 243 n n C6 C7 LFA sing 244 n n C6 H61 LFA sing 245 n n C6 H62 LFA sing 246 n n C7 C8 LFA sing 247 n n C7 H71 LFA sing 248 n n C7 H72 LFA sing 249 n n C8 C9 LFA sing 250 n n C8 H81 LFA sing 251 n n C8 H82 LFA sing 252 n n C9 C10 LFA sing 253 n n C9 H91 LFA sing 254 n n C9 H92 LFA sing 255 n n C10 C11 LFA sing 256 n n C10 H101 LFA sing 257 n n C10 H102 LFA sing 258 n n C11 C12 LFA sing 259 n n C11 H111 LFA sing 260 n n C11 H112 LFA sing 261 n n C12 C13 LFA sing 262 n n C12 H121 LFA sing 263 n n C12 H122 LFA sing 264 n n C13 C14 LFA sing 265 n n C13 H131 LFA sing 266 n n C13 H132 LFA sing 267 n n C14 C15 LFA sing 268 n n C14 H141 LFA sing 269 n n C14 H142 LFA sing 270 n n C15 C16 LFA sing 271 n n C15 H151 LFA sing 272 n n C15 H152 LFA sing 273 n n C16 C17 LFA sing 274 n n C16 H161 LFA sing 275 n n C16 H162 LFA sing 276 n n C17 C18 LFA sing 277 n n C17 H171 LFA sing 278 n n C17 H172 LFA sing 279 n n C18 C19 LFA sing 280 n n C18 H181 LFA sing 281 n n C18 H182 LFA sing 282 n n C19 C20 LFA sing 283 n n C19 H191 LFA sing 284 n n C19 H192 LFA sing 285 n n C20 H201 LFA sing 286 n n C20 H202 LFA sing 287 n n C20 H203 LFA sing 288 n n # _atom_sites.entry_id 7ZOY _atom_sites.fract_transf_matrix[1][1] 0.016051 _atom_sites.fract_transf_matrix[1][2] 0.009267 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018535 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 601 601 CL CL . C 3 SO4 A 1 602 602 SO4 SO4 . D 4 LFA A 1 603 1001 LFA LFA . E 4 LFA A 1 604 1002 LFA LFA . F 4 LFA A 1 605 1003 LFA LFA . G 4 LFA A 1 606 1004 LFA LFA . H 4 LFA A 1 607 1005 LFA LFA . I 4 LFA A 1 608 1006 LFA LFA . J 4 LFA A 1 609 1007 LFA LFA . K 4 LFA A 1 610 1008 LFA LFA . L 5 OLA A 1 611 1009 OLA OLA . M 4 LFA A 1 612 1010 LFA LFA . N 4 LFA A 1 613 1011 LFA LFA . O 4 LFA A 1 614 1012 LFA LFA . P 6 GOL A 1 615 1013 GOL GOL . Q 5 OLA A 1 616 1014 OLA OLA . R 4 LFA A 1 617 1015 LFA LFA . S 4 LFA A 1 618 1016 LFA LFA . T 7 HOH A 1 701 412 HOH HOH . T 7 HOH A 2 702 721 HOH HOH . T 7 HOH A 3 703 708 HOH HOH . T 7 HOH A 4 704 707 HOH HOH . T 7 HOH A 5 705 735 HOH HOH . T 7 HOH A 6 706 407 HOH HOH . T 7 HOH A 7 707 703 HOH HOH . T 7 HOH A 8 708 719 HOH HOH . T 7 HOH A 9 709 504 HOH HOH . T 7 HOH A 10 710 711 HOH HOH . T 7 HOH A 11 711 702 HOH HOH . T 7 HOH A 12 712 712 HOH HOH . T 7 HOH A 13 713 410 HOH HOH . T 7 HOH A 14 714 704 HOH HOH . T 7 HOH A 15 715 716 HOH HOH . T 7 HOH A 16 716 734 HOH HOH . T 7 HOH A 17 717 415 HOH HOH . T 7 HOH A 18 718 722 HOH HOH . T 7 HOH A 19 719 750 HOH HOH . T 7 HOH A 20 720 701 HOH HOH . T 7 HOH A 21 721 740 HOH HOH . T 7 HOH A 22 722 402 HOH HOH . T 7 HOH A 23 723 506 HOH HOH . T 7 HOH A 24 724 414 HOH HOH . T 7 HOH A 25 725 748 HOH HOH . T 7 HOH A 26 726 706 HOH HOH . T 7 HOH A 27 727 507 HOH HOH . T 7 HOH A 28 728 505 HOH HOH . T 7 HOH A 29 729 501 HOH HOH . T 7 HOH A 30 730 508 HOH HOH . T 7 HOH A 31 731 401 HOH HOH . T 7 HOH A 32 732 736 HOH HOH . T 7 HOH A 33 733 418 HOH HOH . T 7 HOH A 34 734 404 HOH HOH . T 7 HOH A 35 735 502 HOH HOH . T 7 HOH A 36 736 717 HOH HOH . T 7 HOH A 37 737 743 HOH HOH . T 7 HOH A 38 738 738 HOH HOH . T 7 HOH A 39 739 745 HOH HOH . T 7 HOH A 40 740 417 HOH HOH . T 7 HOH A 41 741 725 HOH HOH . T 7 HOH A 42 742 723 HOH HOH . T 7 HOH A 43 743 408 HOH HOH . T 7 HOH A 44 744 713 HOH HOH . T 7 HOH A 45 745 731 HOH HOH . T 7 HOH A 46 746 727 HOH HOH . T 7 HOH A 47 747 726 HOH HOH . T 7 HOH A 48 748 715 HOH HOH . T 7 HOH A 49 749 728 HOH HOH . T 7 HOH A 50 750 403 HOH HOH . T 7 HOH A 51 751 710 HOH HOH . T 7 HOH A 52 752 705 HOH HOH . T 7 HOH A 53 753 733 HOH HOH . T 7 HOH A 54 754 413 HOH HOH . T 7 HOH A 55 755 720 HOH HOH . T 7 HOH A 56 756 416 HOH HOH . T 7 HOH A 57 757 729 HOH HOH . T 7 HOH A 58 758 746 HOH HOH . T 7 HOH A 59 759 732 HOH HOH . T 7 HOH A 60 760 737 HOH HOH . T 7 HOH A 61 761 709 HOH HOH . T 7 HOH A 62 762 724 HOH HOH . T 7 HOH A 63 763 409 HOH HOH . T 7 HOH A 64 764 742 HOH HOH . T 7 HOH A 65 765 747 HOH HOH . T 7 HOH A 66 766 751 HOH HOH . T 7 HOH A 67 767 730 HOH HOH . T 7 HOH A 68 768 741 HOH HOH . T 7 HOH A 69 769 714 HOH HOH . T 7 HOH A 70 770 744 HOH HOH . T 7 HOH A 71 771 752 HOH HOH . T 7 HOH A 72 772 718 HOH HOH . T 7 HOH A 73 773 749 HOH HOH . T 7 HOH A 74 774 739 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . M 4 -4.246 -1.313 -19.229 1 37.2 ? C1 LFA 612 A 1 HETATM 2 C C2 LFA . . . M 4 -5.018 -2.295 -20.077 1 27.42 ? C2 LFA 612 A 1 HETATM 3 C C3 LFA . . . M 4 -4.219 -2.853 -21.225 1 39.97 ? C3 LFA 612 A 1 HETATM 4 C C4 LFA . . . M 4 -5.029 -3.137 -22.465 1 47.89 ? C4 LFA 612 A 1 HETATM 5 C C5 LFA . . . M 4 -4.231 -3.715 -23.608 1 46.95 ? C5 LFA 612 A 1 HETATM 6 C C6 LFA . . . M 4 -4.415 -2.988 -24.918 1 46.8 ? C6 LFA 612 A 1 HETATM 7 C C7 LFA . . . M 4 -4.734 -3.886 -26.089 1 39.68 ? C7 LFA 612 A 1 HETATM 8 C C8 LFA . . . M 4 -5.852 -3.382 -26.972 1 29.18 ? C8 LFA 612 A 1 HETATM 9 C C9 LFA . . . M 4 -5.405 -2.935 -28.343 1 54.53 ? C9 LFA 612 A 1 HETATM 10 C C10 LFA . . . M 4 -6.137 -1.726 -28.875 1 39.58 ? C10 LFA 612 A 1 HETATM 11 C C11 LFA . . . M 4 -5.621 -1.227 -30.204 1 40.58 ? C11 LFA 612 A 1 HETATM 12 C C12 LFA . . . M 4 -6.047 0.18 -30.547 1 45.92 ? C12 LFA 612 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 699 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #