data_7ZQF # _model_server_result.job_id '_d4nLbwvZvdHwzvMIlUXOw' _model_server_result.datetime_utc '2024-12-22 04:14:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zqf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7ZQF # _exptl.entry_id 7ZQF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZQF _cell.length_a 48.918 _cell.length_b 60.253 _cell.length_c 82.385 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZQF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7ZQF _atom_sites.fract_transf_matrix[1][1] 0.020442 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016597 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012138 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL B 1 201 1 GOL GOL . D 4 JW6 B 1 202 1 JW6 XXX . E 5 HOH A 1 101 61 HOH HOH . E 5 HOH A 2 102 64 HOH HOH . E 5 HOH A 3 103 98 HOH HOH . E 5 HOH A 4 104 143 HOH HOH . E 5 HOH A 5 105 18 HOH HOH . E 5 HOH A 6 106 38 HOH HOH . E 5 HOH A 7 107 165 HOH HOH . E 5 HOH A 8 108 45 HOH HOH . E 5 HOH A 9 109 115 HOH HOH . E 5 HOH A 10 110 203 HOH HOH . E 5 HOH A 11 111 189 HOH HOH . E 5 HOH A 12 112 74 HOH HOH . E 5 HOH A 13 113 163 HOH HOH . E 5 HOH A 14 114 182 HOH HOH . E 5 HOH A 15 115 52 HOH HOH . E 5 HOH A 16 116 31 HOH HOH . E 5 HOH A 17 117 103 HOH HOH . E 5 HOH A 18 118 178 HOH HOH . E 5 HOH A 19 119 30 HOH HOH . E 5 HOH A 20 120 190 HOH HOH . E 5 HOH A 21 121 101 HOH HOH . E 5 HOH A 22 122 150 HOH HOH . E 5 HOH A 23 123 13 HOH HOH . E 5 HOH A 24 124 206 HOH HOH . E 5 HOH A 25 125 162 HOH HOH . E 5 HOH A 26 126 25 HOH HOH . E 5 HOH A 27 127 24 HOH HOH . E 5 HOH A 28 128 23 HOH HOH . E 5 HOH A 29 129 72 HOH HOH . E 5 HOH A 30 130 85 HOH HOH . E 5 HOH A 31 131 83 HOH HOH . E 5 HOH A 32 132 89 HOH HOH . E 5 HOH A 33 133 200 HOH HOH . E 5 HOH A 34 134 170 HOH HOH . E 5 HOH A 35 135 109 HOH HOH . E 5 HOH A 36 136 40 HOH HOH . E 5 HOH A 37 137 168 HOH HOH . E 5 HOH A 38 138 138 HOH HOH . E 5 HOH A 39 139 153 HOH HOH . E 5 HOH A 40 140 37 HOH HOH . E 5 HOH A 41 141 119 HOH HOH . E 5 HOH A 42 142 160 HOH HOH . F 5 HOH B 1 301 120 HOH HOH . F 5 HOH B 2 302 158 HOH HOH . F 5 HOH B 3 303 86 HOH HOH . F 5 HOH B 4 304 102 HOH HOH . F 5 HOH B 5 305 105 HOH HOH . F 5 HOH B 6 306 67 HOH HOH . F 5 HOH B 7 307 82 HOH HOH . F 5 HOH B 8 308 117 HOH HOH . F 5 HOH B 9 309 161 HOH HOH . F 5 HOH B 10 310 66 HOH HOH . F 5 HOH B 11 311 47 HOH HOH . F 5 HOH B 12 312 28 HOH HOH . F 5 HOH B 13 313 6 HOH HOH . F 5 HOH B 14 314 33 HOH HOH . F 5 HOH B 15 315 65 HOH HOH . F 5 HOH B 16 316 35 HOH HOH . F 5 HOH B 17 317 92 HOH HOH . F 5 HOH B 18 318 71 HOH HOH . F 5 HOH B 19 319 26 HOH HOH . F 5 HOH B 20 320 79 HOH HOH . F 5 HOH B 21 321 16 HOH HOH . F 5 HOH B 22 322 39 HOH HOH . F 5 HOH B 23 323 14 HOH HOH . F 5 HOH B 24 324 22 HOH HOH . F 5 HOH B 25 325 1 HOH HOH . F 5 HOH B 26 326 19 HOH HOH . F 5 HOH B 27 327 15 HOH HOH . F 5 HOH B 28 328 7 HOH HOH . F 5 HOH B 29 329 3 HOH HOH . F 5 HOH B 30 330 135 HOH HOH . F 5 HOH B 31 331 96 HOH HOH . F 5 HOH B 32 332 157 HOH HOH . F 5 HOH B 33 333 173 HOH HOH . F 5 HOH B 34 334 5 HOH HOH . F 5 HOH B 35 335 132 HOH HOH . F 5 HOH B 36 336 4 HOH HOH . F 5 HOH B 37 337 107 HOH HOH . F 5 HOH B 38 338 56 HOH HOH . F 5 HOH B 39 339 2 HOH HOH . F 5 HOH B 40 340 9 HOH HOH . F 5 HOH B 41 341 104 HOH HOH . F 5 HOH B 42 342 191 HOH HOH . F 5 HOH B 43 343 36 HOH HOH . F 5 HOH B 44 344 70 HOH HOH . F 5 HOH B 45 345 125 HOH HOH . F 5 HOH B 46 346 146 HOH HOH . F 5 HOH B 47 347 130 HOH HOH . F 5 HOH B 48 348 134 HOH HOH . F 5 HOH B 49 349 123 HOH HOH . F 5 HOH B 50 350 73 HOH HOH . F 5 HOH B 51 351 94 HOH HOH . F 5 HOH B 52 352 90 HOH HOH . F 5 HOH B 53 353 172 HOH HOH . F 5 HOH B 54 354 11 HOH HOH . F 5 HOH B 55 355 32 HOH HOH . F 5 HOH B 56 356 58 HOH HOH . F 5 HOH B 57 357 95 HOH HOH . F 5 HOH B 58 358 8 HOH HOH . F 5 HOH B 59 359 100 HOH HOH . F 5 HOH B 60 360 60 HOH HOH . F 5 HOH B 61 361 12 HOH HOH . F 5 HOH B 62 362 179 HOH HOH . F 5 HOH B 63 363 129 HOH HOH . F 5 HOH B 64 364 76 HOH HOH . F 5 HOH B 65 365 42 HOH HOH . F 5 HOH B 66 366 99 HOH HOH . F 5 HOH B 67 367 84 HOH HOH . F 5 HOH B 68 368 80 HOH HOH . F 5 HOH B 69 369 137 HOH HOH . F 5 HOH B 70 370 54 HOH HOH . F 5 HOH B 71 371 159 HOH HOH . F 5 HOH B 72 372 34 HOH HOH . F 5 HOH B 73 373 57 HOH HOH . F 5 HOH B 74 374 93 HOH HOH . F 5 HOH B 75 375 91 HOH HOH . F 5 HOH B 76 376 177 HOH HOH . F 5 HOH B 77 377 20 HOH HOH . F 5 HOH B 78 378 27 HOH HOH . F 5 HOH B 79 379 175 HOH HOH . F 5 HOH B 80 380 118 HOH HOH . F 5 HOH B 81 381 51 HOH HOH . F 5 HOH B 82 382 186 HOH HOH . F 5 HOH B 83 383 121 HOH HOH . F 5 HOH B 84 384 164 HOH HOH . F 5 HOH B 85 385 204 HOH HOH . F 5 HOH B 86 386 156 HOH HOH . F 5 HOH B 87 387 198 HOH HOH . F 5 HOH B 88 388 21 HOH HOH . F 5 HOH B 89 389 195 HOH HOH . F 5 HOH B 90 390 192 HOH HOH . F 5 HOH B 91 391 50 HOH HOH . F 5 HOH B 92 392 193 HOH HOH . F 5 HOH B 93 393 171 HOH HOH . F 5 HOH B 94 394 166 HOH HOH . F 5 HOH B 95 395 201 HOH HOH . F 5 HOH B 96 396 108 HOH HOH . F 5 HOH B 97 397 133 HOH HOH . F 5 HOH B 98 398 78 HOH HOH . F 5 HOH B 99 399 199 HOH HOH . F 5 HOH B 100 400 185 HOH HOH . F 5 HOH B 101 401 169 HOH HOH . F 5 HOH B 102 402 75 HOH HOH . F 5 HOH B 103 403 116 HOH HOH . F 5 HOH B 104 404 68 HOH HOH . F 5 HOH B 105 405 148 HOH HOH . F 5 HOH B 106 406 81 HOH HOH . F 5 HOH B 107 407 139 HOH HOH . F 5 HOH B 108 408 29 HOH HOH . F 5 HOH B 109 409 188 HOH HOH . F 5 HOH B 110 410 167 HOH HOH . F 5 HOH B 111 411 59 HOH HOH . F 5 HOH B 112 412 145 HOH HOH . F 5 HOH B 113 413 17 HOH HOH . F 5 HOH B 114 414 136 HOH HOH . F 5 HOH B 115 415 69 HOH HOH . F 5 HOH B 116 416 151 HOH HOH . F 5 HOH B 117 417 106 HOH HOH . F 5 HOH B 118 418 63 HOH HOH . F 5 HOH B 119 419 141 HOH HOH . F 5 HOH B 120 420 180 HOH HOH . F 5 HOH B 121 421 122 HOH HOH . F 5 HOH B 122 422 62 HOH HOH . F 5 HOH B 123 423 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -3.092 -0.293 20.625 1 34.03 ? C1 GOL 201 B 1 HETATM 2 O O1 GOL . . . C 3 -2.538 -1.367 21.306 1 31.77 ? O1 GOL 201 B 1 HETATM 3 C C2 GOL . . . C 3 -2.266 0.9 21.101 1 34.34 ? C2 GOL 201 B 1 HETATM 4 O O2 GOL . . . C 3 -2.669 2.127 20.53 1 36.32 ? O2 GOL 201 B 1 HETATM 5 C C3 GOL . . . C 3 -0.844 0.476 20.726 1 31.28 ? C3 GOL 201 B 1 HETATM 6 O O3 GOL . . . C 3 -0.035 1.561 20.98 1 28.67 ? O3 GOL 201 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #