data_7ZRD # _model_server_result.job_id 1hPDAvccwgRDAcOlXWCstA _model_server_result.datetime_utc '2024-11-05 22:39:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zrd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":607}' # _entry.id 7ZRD # _exptl.entry_id 7ZRD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 39.098 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZRD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZRD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 N N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D C GLU 161 B GLU 161 1_555 D N SEP 162 B SEP 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 D C SEP 162 B SEP 162 1_555 D N ALA 163 B ALA 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A O ASN 112 A ASN 112 1_555 J K K . A K 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.815 ? metalc ? metalc2 A O THR 113 A THR 113 1_555 J K K . A K 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.183 ? metalc ? metalc3 A O ASN 114 A ASN 114 1_555 K K K . A K 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.955 ? metalc ? metalc4 A O THR 230 A THR 230 1_555 J K K . A K 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.287 ? metalc ? metalc5 A O ASN 231 A ASN 231 1_555 J K K . A K 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? metalc ? metalc6 A O GLY 232 A GLY 232 1_555 K K K . A K 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.333 ? metalc ? metalc7 A O SER 343 A SER 343 1_555 J K K . A K 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? metalc ? metalc8 A O GLY 369 A GLY 369 1_555 G K K . A K 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.397 ? metalc ? metalc9 A OD1 ASN 466 A ASN 466 1_555 H K K . A K 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.29 ? metalc ? metalc10 A O ASN 466 A ASN 466 1_555 J K K . A K 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.943 ? metalc ? metalc11 A O ASN 467 A ASN 467 1_555 J K K . A K 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc12 A O GLY 468 A GLY 468 1_555 K K K . A K 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.028 ? metalc ? metalc13 A O GLY 492 A GLY 492 1_555 H K K . A K 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.407 ? metalc ? metalc14 D O SER 579 B SER 579 1_555 O K K . B K 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.318 ? metalc ? metalc15 D OD1 ASP 583 B ASP 583 1_555 O K K . B K 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.255 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7ZRD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 K A 1 601 602 K K . F 5 K A 1 602 603 K K . G 5 K A 1 603 604 K K . H 5 K A 1 604 605 K K . I 5 K A 1 605 606 K K . J 5 K A 1 606 607 K K . K 5 K A 1 607 608 K K . L 6 CDL A 1 608 701 CDL CDL . M 6 CDL A 1 609 801 CDL CDL . N 5 K B 1 701 601 K K . O 5 K B 1 702 901 K K . P 7 VO4 B 1 703 902 VO4 VO4 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 5 _atom_site.Cartn_x 123.099 _atom_site.Cartn_y 115.192 _atom_site.Cartn_z 98.371 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 607 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 58 _model_server_stats.query_time_ms 385 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #