data_7ZRR # _model_server_result.job_id lvl6U9bAaECRqp-thGs86Q _model_server_result.datetime_utc '2024-11-29 12:43:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zrr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":102}' # _entry.id 7ZRR # _exptl.entry_id 7ZRR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.88 _entity.id 6 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 1,3,5-tris(bromomethyl)benzene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7ZRR _cell.length_a 120.906 _cell.length_b 120.906 _cell.length_c 42.716 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZRR _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 62 A CYS 31 1_555 A SG CYS 78 A CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf2 A SG CYS 70 A CYS 39 1_555 A SG CYS 141 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? disulf ? disulf3 A SG CYS 166 A CYS 135 1_555 A SG CYS 235 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf4 A SG CYS 198 A CYS 167 1_555 A SG CYS 214 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? disulf ? disulf5 A SG CYS 225 A CYS 194 1_555 A SG CYS 253 A CYS 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? covale ? covale1 B SG CYS 1 B CYS 2 1_555 G C9 ZBR . B ZBR 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.784 ? covale ? covale2 B SG CYS 8 B CYS 9 1_555 G C7 ZBR . B ZBR 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? covale ? covale3 B SG CYS 15 B CYS 16 1_555 G C8 ZBR . B ZBR 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.693 ? # _chem_comp.formula 'C9 H9 Br3' _chem_comp.formula_weight 356.88 _chem_comp.id ZBR _chem_comp.mon_nstd_flag . _chem_comp.name 1,3,5-tris(bromomethyl)benzene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ZBR doub 424 n y C1 C6 ZBR sing 425 n y C1 C7 ZBR sing 426 n n C2 C3 ZBR sing 427 n y C3 C4 ZBR doub 428 n y C3 C8 ZBR sing 429 n n C4 C5 ZBR sing 430 n y C5 C6 ZBR doub 431 n y C5 C9 ZBR sing 432 n n C7 BR2 ZBR sing 433 n n C8 BR1 ZBR sing 434 n n C9 BR3 ZBR sing 435 n n C2 H2 ZBR sing 436 n n C4 H4 ZBR sing 437 n n C6 H6 ZBR sing 438 n n C7 H7 ZBR sing 439 n n C7 H7A ZBR sing 440 n n C8 H8 ZBR sing 441 n n C8 H8A ZBR sing 442 n n C9 H9 ZBR sing 443 n n C9 H9A ZBR sing 444 n n # _atom_sites.entry_id 7ZRR _atom_sites.fract_transf_matrix[1][1] 0.008271 _atom_sites.fract_transf_matrix[1][2] 0.004775 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00955 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1PE A 1 301 301 1PE 1PE . D 4 EDO A 1 302 302 EDO EDO . E 4 EDO A 1 303 303 EDO EDO . F 5 NH2 B 1 101 18 NH2 NH2 . G 6 ZBR B 1 102 101 ZBR ZBR . H 7 HOH A 1 401 402 HOH HOH . H 7 HOH A 2 402 403 HOH HOH . H 7 HOH A 3 403 401 HOH HOH . H 7 HOH A 4 404 408 HOH HOH . H 7 HOH A 5 405 405 HOH HOH . H 7 HOH A 6 406 407 HOH HOH . H 7 HOH A 7 407 404 HOH HOH . H 7 HOH A 8 408 406 HOH HOH . H 7 HOH A 9 409 413 HOH HOH . H 7 HOH A 10 410 410 HOH HOH . H 7 HOH A 11 411 409 HOH HOH . H 7 HOH A 12 412 412 HOH HOH . H 7 HOH A 13 413 417 HOH HOH . H 7 HOH A 14 414 414 HOH HOH . H 7 HOH A 15 415 420 HOH HOH . H 7 HOH A 16 416 416 HOH HOH . H 7 HOH A 17 417 421 HOH HOH . H 7 HOH A 18 418 415 HOH HOH . H 7 HOH A 19 419 428 HOH HOH . H 7 HOH A 20 420 425 HOH HOH . H 7 HOH A 21 421 418 HOH HOH . H 7 HOH A 22 422 423 HOH HOH . H 7 HOH A 23 423 422 HOH HOH . H 7 HOH A 24 424 411 HOH HOH . H 7 HOH A 25 425 427 HOH HOH . H 7 HOH A 26 426 426 HOH HOH . H 7 HOH A 27 427 432 HOH HOH . H 7 HOH A 28 428 438 HOH HOH . H 7 HOH A 29 429 419 HOH HOH . H 7 HOH A 30 430 424 HOH HOH . H 7 HOH A 31 431 430 HOH HOH . H 7 HOH A 32 432 435 HOH HOH . H 7 HOH A 33 433 433 HOH HOH . H 7 HOH A 34 434 429 HOH HOH . H 7 HOH A 35 435 434 HOH HOH . H 7 HOH A 36 436 431 HOH HOH . H 7 HOH A 37 437 444 HOH HOH . H 7 HOH A 38 438 440 HOH HOH . H 7 HOH A 39 439 439 HOH HOH . H 7 HOH A 40 440 447 HOH HOH . H 7 HOH A 41 441 443 HOH HOH . H 7 HOH A 42 442 437 HOH HOH . H 7 HOH A 43 443 451 HOH HOH . H 7 HOH A 44 444 441 HOH HOH . H 7 HOH A 45 445 449 HOH HOH . H 7 HOH A 46 446 436 HOH HOH . H 7 HOH A 47 447 452 HOH HOH . H 7 HOH A 48 448 442 HOH HOH . H 7 HOH A 49 449 455 HOH HOH . H 7 HOH A 50 450 464 HOH HOH . H 7 HOH A 51 451 460 HOH HOH . H 7 HOH A 52 452 446 HOH HOH . H 7 HOH A 53 453 461 HOH HOH . H 7 HOH A 54 454 458 HOH HOH . H 7 HOH A 55 455 448 HOH HOH . H 7 HOH A 56 456 450 HOH HOH . H 7 HOH A 57 457 454 HOH HOH . H 7 HOH A 58 458 445 HOH HOH . H 7 HOH A 59 459 459 HOH HOH . H 7 HOH A 60 460 202 HOH HOH . H 7 HOH A 61 461 468 HOH HOH . H 7 HOH A 62 462 467 HOH HOH . H 7 HOH A 63 463 453 HOH HOH . H 7 HOH A 64 464 456 HOH HOH . H 7 HOH A 65 465 466 HOH HOH . H 7 HOH A 66 466 473 HOH HOH . H 7 HOH A 67 467 470 HOH HOH . H 7 HOH A 68 468 462 HOH HOH . H 7 HOH A 69 469 457 HOH HOH . H 7 HOH A 70 470 471 HOH HOH . H 7 HOH A 71 471 465 HOH HOH . H 7 HOH A 72 472 474 HOH HOH . H 7 HOH A 73 473 482 HOH HOH . H 7 HOH A 74 474 463 HOH HOH . H 7 HOH A 75 475 469 HOH HOH . H 7 HOH A 76 476 486 HOH HOH . H 7 HOH A 77 477 475 HOH HOH . H 7 HOH A 78 478 481 HOH HOH . H 7 HOH A 79 479 472 HOH HOH . H 7 HOH A 80 480 480 HOH HOH . H 7 HOH A 81 481 478 HOH HOH . H 7 HOH A 82 482 479 HOH HOH . H 7 HOH A 83 483 476 HOH HOH . H 7 HOH A 84 484 487 HOH HOH . H 7 HOH A 85 485 483 HOH HOH . H 7 HOH A 86 486 489 HOH HOH . H 7 HOH A 87 487 477 HOH HOH . H 7 HOH A 88 488 490 HOH HOH . H 7 HOH A 89 489 484 HOH HOH . H 7 HOH A 90 490 492 HOH HOH . H 7 HOH A 91 491 488 HOH HOH . H 7 HOH A 92 492 493 HOH HOH . H 7 HOH A 93 493 485 HOH HOH . H 7 HOH A 94 494 494 HOH HOH . H 7 HOH A 95 495 495 HOH HOH . H 7 HOH A 96 496 491 HOH HOH . H 7 HOH A 97 497 496 HOH HOH . H 7 HOH A 98 498 502 HOH HOH . H 7 HOH A 99 499 500 HOH HOH . H 7 HOH A 100 500 498 HOH HOH . H 7 HOH A 101 501 499 HOH HOH . H 7 HOH A 102 502 497 HOH HOH . H 7 HOH A 103 503 506 HOH HOH . H 7 HOH A 104 504 501 HOH HOH . H 7 HOH A 105 505 505 HOH HOH . H 7 HOH A 106 506 509 HOH HOH . H 7 HOH A 107 507 504 HOH HOH . H 7 HOH A 108 508 507 HOH HOH . H 7 HOH A 109 509 503 HOH HOH . H 7 HOH A 110 510 511 HOH HOH . H 7 HOH A 111 511 508 HOH HOH . H 7 HOH A 112 512 512 HOH HOH . H 7 HOH A 113 513 510 HOH HOH . H 7 HOH A 114 514 513 HOH HOH . H 7 HOH A 115 515 514 HOH HOH . H 7 HOH A 116 516 516 HOH HOH . H 7 HOH A 117 517 515 HOH HOH . H 7 HOH A 118 518 517 HOH HOH . H 7 HOH A 119 519 518 HOH HOH . H 7 HOH A 120 520 519 HOH HOH . H 7 HOH A 121 521 520 HOH HOH . I 7 HOH B 1 201 204 HOH HOH . I 7 HOH B 2 202 201 HOH HOH . I 7 HOH B 3 203 203 HOH HOH . I 7 HOH B 4 204 205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZBR . . . G 6 4.842 -21.127 -10.909 1 40.45 ? C1 ZBR 102 B 1 HETATM 2 C C2 ZBR . . . G 6 5.928 -21.817 -11.454 1 41.63 ? C2 ZBR 102 B 1 HETATM 3 C C3 ZBR . . . G 6 6.26 -21.703 -12.807 1 45.52 ? C3 ZBR 102 B 1 HETATM 4 C C4 ZBR . . . G 6 5.468 -20.89 -13.623 1 45.49 ? C4 ZBR 102 B 1 HETATM 5 C C5 ZBR . . . G 6 4.372 -20.196 -13.116 1 49.02 ? C5 ZBR 102 B 1 HETATM 6 C C6 ZBR . . . G 6 4.065 -20.333 -11.759 1 45.95 ? C6 ZBR 102 B 1 HETATM 7 C C7 ZBR . . . G 6 4.491 -21.267 -9.462 1 39.17 ? C7 ZBR 102 B 1 HETATM 8 C C8 ZBR . . . G 6 7.428 -22.439 -13.376 1 36.01 ? C8 ZBR 102 B 1 HETATM 9 C C9 ZBR . . . G 6 3.555 -19.313 -14.003 1 57.33 ? C9 ZBR 102 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 9 #