data_7ZRX # _model_server_result.job_id e8rKtumMEMfLMrGn1ZVdGA _model_server_result.datetime_utc '2025-01-11 06:25:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zrx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":203}' # _entry.id 7ZRX # _exptl.entry_id 7ZRX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZRX _cell.length_a 105.537 _cell.length_b 105.537 _cell.length_c 105.537 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZRX _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 139 A CYS 119 1_555 D CAB HEC . A HEC 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.75 ? covale ? covale2 A SG CYS 142 A CYS 122 1_555 D CAC HEC . A HEC 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.795 ? covale ? covale3 B SG CYS 139 B CYS 119 1_555 E CAB HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? covale ? covale4 B SG CYS 142 B CYS 122 1_555 E CAC HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? metalc ? metalc1 A NE2 HIS 91 A HIS 71 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.065 ? metalc ? metalc2 A NE2 HIS 91 A HIS 71 1_555 C ZN ZN . A ZN 201 11_455 ? ? ? ? A ? ? ? ? ? ? ? 2.07 ? metalc ? metalc3 A NE2 HIS 143 A HIS 123 1_555 D FE HEC . A HEC 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc4 C ZN ZN . A ZN 201 1_555 I O HOH . A HOH 337 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc5 C ZN ZN . A ZN 201 1_555 I O HOH . A HOH 337 11_455 ? A ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc6 B OE2 GLU 88 B GLU 68 1_555 H ZN ZN . B ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc7 B ND1 HIS 91 B HIS 71 1_555 H ZN ZN . B ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc8 B NE2 HIS 143 B HIS 123 1_555 E FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7ZRX _atom_sites.fract_transf_matrix[1][1] 0.009475 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009475 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 201 202 ZN ZN . D 3 HEC A 1 202 203 HEC HEC . E 3 HEC B 1 201 201 HEC HEC . F 4 GOL B 1 202 202 GOL GOL . G 4 GOL B 1 203 203 GOL GOL . H 2 ZN B 1 204 204 ZN ZN . I 5 HOH A 1 301 341 HOH HOH . I 5 HOH A 2 302 304 HOH HOH . I 5 HOH A 3 303 307 HOH HOH . I 5 HOH A 4 304 345 HOH HOH . I 5 HOH A 5 305 332 HOH HOH . I 5 HOH A 6 306 320 HOH HOH . I 5 HOH A 7 307 330 HOH HOH . I 5 HOH A 8 308 333 HOH HOH . I 5 HOH A 9 309 331 HOH HOH . I 5 HOH A 10 310 326 HOH HOH . I 5 HOH A 11 311 322 HOH HOH . I 5 HOH A 12 312 325 HOH HOH . I 5 HOH A 13 313 327 HOH HOH . I 5 HOH A 14 314 350 HOH HOH . I 5 HOH A 15 315 339 HOH HOH . I 5 HOH A 16 316 370 HOH HOH . I 5 HOH A 17 317 349 HOH HOH . I 5 HOH A 18 318 375 HOH HOH . I 5 HOH A 19 319 340 HOH HOH . I 5 HOH A 20 320 347 HOH HOH . I 5 HOH A 21 321 309 HOH HOH . I 5 HOH A 22 322 387 HOH HOH . I 5 HOH A 23 323 334 HOH HOH . I 5 HOH A 24 324 324 HOH HOH . I 5 HOH A 25 325 373 HOH HOH . I 5 HOH A 26 326 361 HOH HOH . I 5 HOH A 27 327 366 HOH HOH . I 5 HOH A 28 328 365 HOH HOH . I 5 HOH A 29 329 314 HOH HOH . I 5 HOH A 30 330 389 HOH HOH . I 5 HOH A 31 331 372 HOH HOH . I 5 HOH A 32 332 381 HOH HOH . I 5 HOH A 33 333 358 HOH HOH . I 5 HOH A 34 334 370 HOH HOH . I 5 HOH A 35 335 388 HOH HOH . I 5 HOH A 36 336 354 HOH HOH . I 5 HOH A 37 337 344 HOH HOH . I 5 HOH A 38 338 393 HOH HOH . I 5 HOH A 39 339 351 HOH HOH . I 5 HOH A 40 340 384 HOH HOH . I 5 HOH A 41 341 377 HOH HOH . I 5 HOH A 42 342 380 HOH HOH . I 5 HOH A 43 343 385 HOH HOH . I 5 HOH A 44 344 386 HOH HOH . I 5 HOH A 45 345 394 HOH HOH . I 5 HOH A 46 346 398 HOH HOH . I 5 HOH A 47 347 355 HOH HOH . I 5 HOH A 48 348 395 HOH HOH . I 5 HOH A 49 349 407 HOH HOH . I 5 HOH A 50 350 401 HOH HOH . I 5 HOH A 51 351 411 HOH HOH . J 5 HOH B 1 301 307 HOH HOH . J 5 HOH B 2 302 383 HOH HOH . J 5 HOH B 3 303 316 HOH HOH . J 5 HOH B 4 304 313 HOH HOH . J 5 HOH B 5 305 355 HOH HOH . J 5 HOH B 6 306 312 HOH HOH . J 5 HOH B 7 307 309 HOH HOH . J 5 HOH B 8 308 388 HOH HOH . J 5 HOH B 9 309 321 HOH HOH . J 5 HOH B 10 310 351 HOH HOH . J 5 HOH B 11 311 320 HOH HOH . J 5 HOH B 12 312 358 HOH HOH . J 5 HOH B 13 313 382 HOH HOH . J 5 HOH B 14 314 338 HOH HOH . J 5 HOH B 15 315 332 HOH HOH . J 5 HOH B 16 316 385 HOH HOH . J 5 HOH B 17 317 322 HOH HOH . J 5 HOH B 18 318 350 HOH HOH . J 5 HOH B 19 319 327 HOH HOH . J 5 HOH B 20 320 304 HOH HOH . J 5 HOH B 21 321 324 HOH HOH . J 5 HOH B 22 322 335 HOH HOH . J 5 HOH B 23 323 323 HOH HOH . J 5 HOH B 24 324 364 HOH HOH . J 5 HOH B 25 325 337 HOH HOH . J 5 HOH B 26 326 330 HOH HOH . J 5 HOH B 27 327 362 HOH HOH . J 5 HOH B 28 328 356 HOH HOH . J 5 HOH B 29 329 347 HOH HOH . J 5 HOH B 30 330 343 HOH HOH . J 5 HOH B 31 331 346 HOH HOH . J 5 HOH B 32 332 340 HOH HOH . J 5 HOH B 33 333 348 HOH HOH . J 5 HOH B 34 334 360 HOH HOH . J 5 HOH B 35 335 359 HOH HOH . J 5 HOH B 36 336 346 HOH HOH . J 5 HOH B 37 337 337 HOH HOH . J 5 HOH B 38 338 328 HOH HOH . J 5 HOH B 39 339 384 HOH HOH . J 5 HOH B 40 340 368 HOH HOH . J 5 HOH B 41 341 361 HOH HOH . J 5 HOH B 42 342 381 HOH HOH . J 5 HOH B 43 343 365 HOH HOH . J 5 HOH B 44 344 367 HOH HOH . J 5 HOH B 45 345 372 HOH HOH . J 5 HOH B 46 346 348 HOH HOH . J 5 HOH B 47 347 382 HOH HOH . J 5 HOH B 48 348 389 HOH HOH . J 5 HOH B 49 349 378 HOH HOH . J 5 HOH B 50 350 387 HOH HOH . J 5 HOH B 51 351 375 HOH HOH . J 5 HOH B 52 352 302 HOH HOH . J 5 HOH B 53 353 366 HOH HOH . J 5 HOH B 54 354 395 HOH HOH . J 5 HOH B 55 355 398 HOH HOH . J 5 HOH B 56 356 400 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 -10.388 7.224 -1.934 1 79.74 ? C1 GOL 203 B 1 HETATM 2 O O1 GOL . . . G 4 -11.606 6.61 -2.342 1 72.78 ? O1 GOL 203 B 1 HETATM 3 C C2 GOL . . . G 4 -10.449 8.737 -2.031 1 82.01 ? C2 GOL 203 B 1 HETATM 4 O O2 GOL . . . G 4 -11.5 9.142 -2.921 1 61.36 ? O2 GOL 203 B 1 HETATM 5 C C3 GOL . . . G 4 -10.605 9.398 -0.67 1 94.14 ? C3 GOL 203 B 1 HETATM 6 O O3 GOL . . . G 4 -9.381 9.48 0.065 1 90.92 ? O3 GOL 203 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #