data_7ZST
#
_model_server_result.job_id            TOdY2MvYHrtGleMXkL48Dg 
_model_server_result.datetime_utc      '2025-03-13 18:06:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7zst 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":402}' 
#
_entry.id    7ZST 
#
_exptl.entry_id    7ZST 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.215 
_cell.angle_gamma         90 
_cell.entry_id            7ZST 
_cell.length_a            119.284 
_cell.length_b            89.735 
_cell.length_c            137.052 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ZST 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 G NA NA . A NA 404 1_555 J O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc2 G NA NA . A NA 404 1_555 L O HOH . C HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc3 G NA NA . A NA 404 1_555 L O HOH . C HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7ZST 
_atom_sites.fract_transf_matrix[1][1]    0.008383 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002922 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011144 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007727 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 GOL A 1 401 401 GOL GOL . 
E 2 GOL A 1 402 402 GOL GOL . 
F 3 SO4 A 1 403 1 SO4 SO4 . 
G 4 NA A 1 404 1 NA NA . 
H 5 JUF B 1 401 401 JUF DRG . 
I 3 SO4 B 1 402 401 SO4 SO4 . 
J 6 HOH A 1 501 13 HOH HOH . 
J 6 HOH A 2 502 23 HOH HOH . 
J 6 HOH A 3 503 44 HOH HOH . 
J 6 HOH A 4 504 12 HOH HOH . 
J 6 HOH A 5 505 31 HOH HOH . 
J 6 HOH A 6 506 22 HOH HOH . 
J 6 HOH A 7 507 30 HOH HOH . 
J 6 HOH A 8 508 36 HOH HOH . 
J 6 HOH A 9 509 10 HOH HOH . 
J 6 HOH A 10 510 17 HOH HOH . 
J 6 HOH A 11 511 21 HOH HOH . 
J 6 HOH A 12 512 29 HOH HOH . 
J 6 HOH A 13 513 47 HOH HOH . 
K 6 HOH B 1 501 16 HOH HOH . 
K 6 HOH B 2 502 4 HOH HOH . 
K 6 HOH B 3 503 26 HOH HOH . 
K 6 HOH B 4 504 19 HOH HOH . 
K 6 HOH B 5 505 27 HOH HOH . 
K 6 HOH B 6 506 6 HOH HOH . 
K 6 HOH B 7 507 3 HOH HOH . 
K 6 HOH B 8 508 46 HOH HOH . 
K 6 HOH B 9 509 7 HOH HOH . 
K 6 HOH B 10 510 11 HOH HOH . 
K 6 HOH B 11 511 2 HOH HOH . 
K 6 HOH B 12 512 38 HOH HOH . 
K 6 HOH B 13 513 32 HOH HOH . 
K 6 HOH B 14 514 28 HOH HOH . 
K 6 HOH B 15 515 25 HOH HOH . 
K 6 HOH B 16 516 33 HOH HOH . 
K 6 HOH B 17 517 41 HOH HOH . 
K 6 HOH B 18 518 39 HOH HOH . 
L 6 HOH C 1 401 9 HOH HOH . 
L 6 HOH C 2 402 18 HOH HOH . 
L 6 HOH C 3 403 43 HOH HOH . 
L 6 HOH C 4 404 15 HOH HOH . 
L 6 HOH C 5 405 14 HOH HOH . 
L 6 HOH C 6 406 34 HOH HOH . 
L 6 HOH C 7 407 24 HOH HOH . 
L 6 HOH C 8 408 20 HOH HOH . 
L 6 HOH C 9 409 8 HOH HOH . 
L 6 HOH C 10 410 48 HOH HOH . 
L 6 HOH C 11 411 40 HOH HOH . 
L 6 HOH C 12 412 45 HOH HOH . 
L 6 HOH C 13 413 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 2 6.579 31.569 -24.442 1 83.57 0 C1 GOL 402 A 1 
HETATM 2 O O1 GOL . . . E 2 6.279 31.491 -23.045 1 80.76 0 O1 GOL 402 A 1 
HETATM 3 C C2 GOL . . . E 2 8.04 31.269 -24.747 1 82.82 0 C2 GOL 402 A 1 
HETATM 4 O O2 GOL . . . E 2 8.39 31.788 -26.034 1 83.49 0 O2 GOL 402 A 1 
HETATM 5 C C3 GOL . . . E 2 8.392 29.791 -24.704 1 82.89 0 C3 GOL 402 A 1 
HETATM 6 O O3 GOL . . . E 2 9.469 29.536 -23.804 1 79.78 0 O3 GOL 402 A 1 
HETATM 7 H H11 GOL . . . E 2 6.365 32.476 -24.769 1 83.02 0 H11 GOL 402 A 1 
HETATM 8 H H12 GOL . . . E 2 6.009 30.923 -24.93 1 84.97 0 H12 GOL 402 A 1 
HETATM 9 H HO1 GOL . . . E 2 5.55 31.723 -22.991 0 30 0 HO1 GOL 402 A 1 
HETATM 10 H H2 GOL . . . E 2 8.591 31.731 -24.069 1 80.93 0 H2 GOL 402 A 1 
HETATM 11 H HO2 GOL . . . E 2 8.79 31.02 -26.521 0 30 0 HO2 GOL 402 A 1 
HETATM 12 H H31 GOL . . . E 2 8.647 29.49 -25.61 1 83.71 0 H31 GOL 402 A 1 
HETATM 13 H H32 GOL . . . E 2 7.6 29.275 -24.417 1 83.92 0 H32 GOL 402 A 1 
HETATM 14 H HO3 GOL . . . E 2 9.189 29.657 -23.013 1 79.62 0 HO3 GOL 402 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#