data_7ZT5 # _model_server_result.job_id uOwEs2z9iZcvCVNybxkulQ _model_server_result.datetime_utc '2024-11-23 12:43:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zt5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 7ZT5 # _exptl.entry_id 7ZT5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 166.131 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-methanoyl-2-oxidanyl-benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZT5 _cell.length_a 90.97 _cell.length_b 104.67 _cell.length_c 117.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZT5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 99 A CYS 98 1_555 A SG CYS 162 A CYS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? disulf ? disulf2 A SG CYS 201 A CYS 200 1_555 A SG CYS 257 A CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 C SG CYS 24 D CYS 24 1_555 C SG CYS 90 D CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? disulf ? disulf5 C SG CYS 134 D CYS 134 1_555 C SG CYS 184 D CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf6 C SG CYS 159 D CYS 159 1_555 D SG CYS 169 E CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf7 D SG CYS 23 E CYS 23 1_555 D SG CYS 91 E CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? disulf ? disulf8 D SG CYS 143 E CYS 143 1_555 D SG CYS 208 E CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? covale ? covale1 A NZ LYS 44 A LYS 43 1_555 E C7 7ZS . A 7ZS 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.241 ? # _chem_comp.formula 'C8 H6 O4' _chem_comp.formula_weight 166.131 _chem_comp.id 7ZS _chem_comp.mon_nstd_flag . _chem_comp.name '3-methanoyl-2-oxidanyl-benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C 7ZS doub 1 n n C2 C3 7ZS doub 2 n y C2 C1 7ZS sing 3 n y C3 C4 7ZS sing 4 n y C C1 7ZS sing 5 n n C O1 7ZS sing 6 n n C1 C6 7ZS doub 7 n y C4 C5 7ZS doub 8 n y C6 C5 7ZS sing 9 n y C6 O2 7ZS sing 10 n n C5 C7 7ZS sing 11 n n C2 H1 7ZS sing 12 n n C3 H2 7ZS sing 13 n n C4 H3 7ZS sing 14 n n C7 H4 7ZS sing 15 n n O1 H7 7ZS sing 16 n n O2 H8 7ZS sing 17 n n C7 O3 7ZS doub 18 n n # _atom_sites.entry_id 7ZT5 _atom_sites.fract_transf_matrix[1][1] 0.010993 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 7ZS A 1 301 301 7ZS 7ZS . F 6 HOH A 1 401 65 HOH HOH . F 6 HOH A 2 402 7 HOH HOH . F 6 HOH A 3 403 62 HOH HOH . F 6 HOH A 4 404 11 HOH HOH . F 6 HOH A 5 405 5 HOH HOH . F 6 HOH A 6 406 54 HOH HOH . F 6 HOH A 7 407 30 HOH HOH . F 6 HOH A 8 408 2 HOH HOH . F 6 HOH A 9 409 85 HOH HOH . F 6 HOH A 10 410 63 HOH HOH . F 6 HOH A 11 411 86 HOH HOH . F 6 HOH A 12 412 31 HOH HOH . F 6 HOH A 13 413 52 HOH HOH . F 6 HOH A 14 414 4 HOH HOH . F 6 HOH A 15 415 71 HOH HOH . F 6 HOH A 16 416 6 HOH HOH . F 6 HOH A 17 417 27 HOH HOH . F 6 HOH A 18 418 51 HOH HOH . F 6 HOH A 19 419 3 HOH HOH . F 6 HOH A 20 420 1 HOH HOH . F 6 HOH A 21 421 96 HOH HOH . F 6 HOH A 22 422 32 HOH HOH . F 6 HOH A 23 423 66 HOH HOH . G 6 HOH B 1 101 78 HOH HOH . G 6 HOH B 2 102 57 HOH HOH . G 6 HOH B 3 103 61 HOH HOH . G 6 HOH B 4 104 84 HOH HOH . G 6 HOH B 5 105 83 HOH HOH . G 6 HOH B 6 106 58 HOH HOH . G 6 HOH B 7 107 55 HOH HOH . G 6 HOH B 8 108 77 HOH HOH . G 6 HOH B 9 109 72 HOH HOH . G 6 HOH B 10 110 95 HOH HOH . H 6 HOH D 1 301 12 HOH HOH . H 6 HOH D 2 302 89 HOH HOH . H 6 HOH D 3 303 90 HOH HOH . H 6 HOH D 4 304 15 HOH HOH . H 6 HOH D 5 305 21 HOH HOH . H 6 HOH D 6 306 18 HOH HOH . H 6 HOH D 7 307 19 HOH HOH . H 6 HOH D 8 308 98 HOH HOH . H 6 HOH D 9 309 92 HOH HOH . H 6 HOH D 10 310 91 HOH HOH . H 6 HOH D 11 311 74 HOH HOH . H 6 HOH D 12 312 93 HOH HOH . H 6 HOH D 13 313 13 HOH HOH . H 6 HOH D 14 314 14 HOH HOH . H 6 HOH D 15 315 69 HOH HOH . I 6 HOH E 1 301 16 HOH HOH . I 6 HOH E 2 302 26 HOH HOH . I 6 HOH E 3 303 87 HOH HOH . I 6 HOH E 4 304 37 HOH HOH . I 6 HOH E 5 305 80 HOH HOH . I 6 HOH E 6 306 68 HOH HOH . I 6 HOH E 7 307 47 HOH HOH . I 6 HOH E 8 308 9 HOH HOH . I 6 HOH E 9 309 41 HOH HOH . I 6 HOH E 10 310 38 HOH HOH . I 6 HOH E 11 311 22 HOH HOH . I 6 HOH E 12 312 67 HOH HOH . I 6 HOH E 13 313 35 HOH HOH . I 6 HOH E 14 314 28 HOH HOH . I 6 HOH E 15 315 44 HOH HOH . I 6 HOH E 16 316 20 HOH HOH . I 6 HOH E 17 317 23 HOH HOH . I 6 HOH E 18 318 24 HOH HOH . I 6 HOH E 19 319 40 HOH HOH . I 6 HOH E 20 320 25 HOH HOH . I 6 HOH E 21 321 82 HOH HOH . I 6 HOH E 22 322 50 HOH HOH . I 6 HOH E 23 323 49 HOH HOH . I 6 HOH E 24 324 48 HOH HOH . I 6 HOH E 25 325 17 HOH HOH . I 6 HOH E 26 326 70 HOH HOH . I 6 HOH E 27 327 94 HOH HOH . I 6 HOH E 28 328 34 HOH HOH . I 6 HOH E 29 329 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C 7ZS . . . E 5 7.968 14.521 -8.364 1 65.49 ? C 7ZS 301 A 1 HETATM 2 O O 7ZS . . . E 5 7.222 15.054 -9.215 1 66.35 ? O 7ZS 301 A 1 HETATM 3 C C1 7ZS . . . E 5 7.942 13.038 -8.252 1 62.97 ? C1 7ZS 301 A 1 HETATM 4 C C2 7ZS . . . E 5 8.592 12.393 -7.193 1 68.04 ? C2 7ZS 301 A 1 HETATM 5 C C3 7ZS . . . E 5 8.572 11.019 -7.075 1 69.45 ? C3 7ZS 301 A 1 HETATM 6 C C4 7ZS . . . E 5 7.909 10.262 -8.017 1 65.94 ? C4 7ZS 301 A 1 HETATM 7 C C5 7ZS . . . E 5 7.243 10.878 -9.095 1 61.31 ? C5 7ZS 301 A 1 HETATM 8 C C6 7ZS . . . E 5 7.259 12.269 -9.209 1 62.23 ? C6 7ZS 301 A 1 HETATM 9 C C7 7ZS . . . E 5 6.554 10.066 -10.069 1 60.14 ? C7 7ZS 301 A 1 HETATM 10 O O1 7ZS . . . E 5 8.731 15.153 -7.601 1 67.34 ? O1 7ZS 301 A 1 HETATM 11 O O2 7ZS . . . E 5 6.622 12.863 -10.262 1 59.38 ? O2 7ZS 301 A 1 # _model_server_stats.io_time_ms 88 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #