data_7ZT8
#
_model_server_result.job_id            EQZD51gevMoVbReqSBWfdw 
_model_server_result.datetime_utc      '2024-11-28 23:34:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7zt8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    7ZT8 
#
_exptl.entry_id    7ZT8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              136.148 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-methylbenzoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7ZT8 
_cell.length_a            69.6 
_cell.length_b            113.13 
_cell.length_c            143.76 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ZT8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 99 A CYS 98 1_555 A SG CYS 162 A CYS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
disulf ? disulf2 A SG CYS 201 A CYS 200 1_555 A SG CYS 257 A CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf4 C SG CYS 24 D CYS 22 1_555 C SG CYS 90 D CYS 88 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 C SG CYS 24 D CYS 22 1_555 C SG CYS 90 D CYS 88 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf6 C SG CYS 134 D CYS 132 1_555 C SG CYS 184 D CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf7 C SG CYS 159 D CYS 157 1_555 D SG CYS 169 E CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf8 D SG CYS 23 E CYS 23 1_555 D SG CYS 91 E CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
disulf ? disulf9 D SG CYS 143 E CYS 143 1_555 D SG CYS 208 E CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? 
covale ? covale1 A NZ LYS 44 A LYS 43 1_555 E C01 OVV . A OVV 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.266 ? 
#
_chem_comp.formula           'C8 H8 O2' 
_chem_comp.formula_weight    136.148 
_chem_comp.id                OVV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-methylbenzoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O09 C08 OVV doub 274 n n 
C08 O10 OVV sing 275 n n 
C08 C06 OVV sing 276 n n 
C07 C06 OVV doub 277 n y 
C07 C02 OVV sing 278 n y 
C06 C05 OVV sing 279 n y 
C01 C02 OVV sing 280 n n 
C02 C03 OVV doub 281 n y 
C05 C04 OVV doub 282 n y 
C03 C04 OVV sing 283 n y 
C01 H1 OVV sing 284 n n 
C01 H2 OVV sing 285 n n 
C01 H3 OVV sing 286 n n 
C03 H4 OVV sing 287 n n 
C04 H5 OVV sing 288 n n 
C05 H6 OVV sing 289 n n 
C07 H7 OVV sing 290 n n 
O10 H8 OVV sing 291 n n 
#
_atom_sites.entry_id                     7ZT8 
_atom_sites.fract_transf_matrix[1][1]    0.014368 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008839 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006956 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 OVV A 1 301 301 OVV OVV . 
F 6 EDO A 1 302 3 EDO EDO . 
G 7 MPO D 1 301 201 MPO MPO . 
H 8 HOH A 1 401 53 HOH HOH . 
H 8 HOH A 2 402 130 HOH HOH . 
H 8 HOH A 3 403 90 HOH HOH . 
H 8 HOH A 4 404 83 HOH HOH . 
H 8 HOH A 5 405 14 HOH HOH . 
H 8 HOH A 6 406 58 HOH HOH . 
H 8 HOH A 7 407 4 HOH HOH . 
H 8 HOH A 8 408 138 HOH HOH . 
H 8 HOH A 9 409 48 HOH HOH . 
H 8 HOH A 10 410 51 HOH HOH . 
H 8 HOH A 11 411 20 HOH HOH . 
H 8 HOH A 12 412 78 HOH HOH . 
H 8 HOH A 13 413 52 HOH HOH . 
H 8 HOH A 14 414 139 HOH HOH . 
H 8 HOH A 15 415 97 HOH HOH . 
H 8 HOH A 16 416 49 HOH HOH . 
H 8 HOH A 17 417 84 HOH HOH . 
H 8 HOH A 18 418 62 HOH HOH . 
H 8 HOH A 19 419 2 HOH HOH . 
H 8 HOH A 20 420 10 HOH HOH . 
H 8 HOH A 21 421 113 HOH HOH . 
H 8 HOH A 22 422 85 HOH HOH . 
H 8 HOH A 23 423 112 HOH HOH . 
H 8 HOH A 24 424 25 HOH HOH . 
H 8 HOH A 25 425 150 HOH HOH . 
H 8 HOH A 26 426 63 HOH HOH . 
H 8 HOH A 27 427 148 HOH HOH . 
H 8 HOH A 28 428 110 HOH HOH . 
H 8 HOH A 29 429 86 HOH HOH . 
H 8 HOH A 30 430 119 HOH HOH . 
H 8 HOH A 31 431 140 HOH HOH . 
H 8 HOH A 32 432 15 HOH HOH . 
H 8 HOH A 33 433 76 HOH HOH . 
H 8 HOH A 34 434 50 HOH HOH . 
H 8 HOH A 35 435 19 HOH HOH . 
H 8 HOH A 36 436 5 HOH HOH . 
H 8 HOH A 37 437 82 HOH HOH . 
H 8 HOH A 38 438 3 HOH HOH . 
H 8 HOH A 39 439 81 HOH HOH . 
H 8 HOH A 40 440 149 HOH HOH . 
H 8 HOH A 41 441 24 HOH HOH . 
H 8 HOH A 42 442 108 HOH HOH . 
H 8 HOH A 43 443 117 HOH HOH . 
H 8 HOH A 44 444 60 HOH HOH . 
H 8 HOH A 45 445 98 HOH HOH . 
H 8 HOH A 46 446 47 HOH HOH . 
H 8 HOH A 47 447 118 HOH HOH . 
H 8 HOH A 48 448 64 HOH HOH . 
H 8 HOH A 49 449 124 HOH HOH . 
H 8 HOH A 50 450 21 HOH HOH . 
H 8 HOH A 51 451 125 HOH HOH . 
H 8 HOH A 52 452 114 HOH HOH . 
H 8 HOH A 53 453 26 HOH HOH . 
I 8 HOH B 1 101 80 HOH HOH . 
I 8 HOH B 2 102 17 HOH HOH . 
I 8 HOH B 3 103 16 HOH HOH . 
I 8 HOH B 4 104 92 HOH HOH . 
I 8 HOH B 5 105 79 HOH HOH . 
I 8 HOH B 6 106 127 HOH HOH . 
I 8 HOH B 7 107 67 HOH HOH . 
I 8 HOH B 8 108 46 HOH HOH . 
I 8 HOH B 9 109 95 HOH HOH . 
I 8 HOH B 10 110 129 HOH HOH . 
I 8 HOH B 11 111 18 HOH HOH . 
I 8 HOH B 12 112 128 HOH HOH . 
J 8 HOH D 1 401 59 HOH HOH . 
J 8 HOH D 2 402 131 HOH HOH . 
J 8 HOH D 3 403 135 HOH HOH . 
J 8 HOH D 4 404 61 HOH HOH . 
J 8 HOH D 5 405 8 HOH HOH . 
J 8 HOH D 6 406 134 HOH HOH . 
J 8 HOH D 7 407 88 HOH HOH . 
J 8 HOH D 8 408 75 HOH HOH . 
J 8 HOH D 9 409 12 HOH HOH . 
J 8 HOH D 10 410 29 HOH HOH . 
J 8 HOH D 11 411 54 HOH HOH . 
J 8 HOH D 12 412 23 HOH HOH . 
J 8 HOH D 13 413 136 HOH HOH . 
J 8 HOH D 14 414 7 HOH HOH . 
J 8 HOH D 15 415 27 HOH HOH . 
J 8 HOH D 16 416 87 HOH HOH . 
J 8 HOH D 17 417 133 HOH HOH . 
J 8 HOH D 18 418 152 HOH HOH . 
J 8 HOH D 19 419 57 HOH HOH . 
J 8 HOH D 20 420 70 HOH HOH . 
J 8 HOH D 21 421 9 HOH HOH . 
J 8 HOH D 22 422 151 HOH HOH . 
J 8 HOH D 23 423 122 HOH HOH . 
J 8 HOH D 24 424 13 HOH HOH . 
J 8 HOH D 25 425 91 HOH HOH . 
J 8 HOH D 26 426 123 HOH HOH . 
J 8 HOH D 27 427 77 HOH HOH . 
J 8 HOH D 28 428 103 HOH HOH . 
J 8 HOH D 29 429 11 HOH HOH . 
J 8 HOH D 30 430 22 HOH HOH . 
J 8 HOH D 31 431 28 HOH HOH . 
J 8 HOH D 32 432 153 HOH HOH . 
J 8 HOH D 33 433 94 HOH HOH . 
J 8 HOH D 34 434 99 HOH HOH . 
K 8 HOH E 1 301 147 HOH HOH . 
K 8 HOH E 2 302 116 HOH HOH . 
K 8 HOH E 3 303 68 HOH HOH . 
K 8 HOH E 4 304 145 HOH HOH . 
K 8 HOH E 5 305 71 HOH HOH . 
K 8 HOH E 6 306 102 HOH HOH . 
K 8 HOH E 7 307 89 HOH HOH . 
K 8 HOH E 8 308 141 HOH HOH . 
K 8 HOH E 9 309 143 HOH HOH . 
K 8 HOH E 10 310 65 HOH HOH . 
K 8 HOH E 11 311 101 HOH HOH . 
K 8 HOH E 12 312 30 HOH HOH . 
K 8 HOH E 13 313 104 HOH HOH . 
K 8 HOH E 14 314 72 HOH HOH . 
K 8 HOH E 15 315 105 HOH HOH . 
K 8 HOH E 16 316 142 HOH HOH . 
K 8 HOH E 17 317 96 HOH HOH . 
K 8 HOH E 18 318 42 HOH HOH . 
K 8 HOH E 19 319 146 HOH HOH . 
K 8 HOH E 20 320 55 HOH HOH . 
K 8 HOH E 21 321 33 HOH HOH . 
K 8 HOH E 22 322 132 HOH HOH . 
K 8 HOH E 23 323 6 HOH HOH . 
K 8 HOH E 24 324 41 HOH HOH . 
K 8 HOH E 25 325 40 HOH HOH . 
K 8 HOH E 26 326 109 HOH HOH . 
K 8 HOH E 27 327 36 HOH HOH . 
K 8 HOH E 28 328 38 HOH HOH . 
K 8 HOH E 29 329 144 HOH HOH . 
K 8 HOH E 30 330 35 HOH HOH . 
K 8 HOH E 31 331 31 HOH HOH . 
K 8 HOH E 32 332 106 HOH HOH . 
K 8 HOH E 33 333 32 HOH HOH . 
K 8 HOH E 34 334 73 HOH HOH . 
K 8 HOH E 35 335 39 HOH HOH . 
K 8 HOH E 36 336 100 HOH HOH . 
K 8 HOH E 37 337 107 HOH HOH . 
K 8 HOH E 38 338 69 HOH HOH . 
K 8 HOH E 39 339 120 HOH HOH . 
K 8 HOH E 40 340 93 HOH HOH . 
K 8 HOH E 41 341 121 HOH HOH . 
K 8 HOH E 42 342 154 HOH HOH . 
K 8 HOH E 43 343 115 HOH HOH . 
K 8 HOH E 44 344 44 HOH HOH . 
K 8 HOH E 45 345 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 OVV . . . E 5 -5.565 -16.151 18.801 1 58.72 ? C01 OVV 301 A 1 
HETATM 2 C C02 OVV . . . E 5 -4.523 -15.107 18.499 1 54.57 ? C02 OVV 301 A 1 
HETATM 3 C C03 OVV . . . E 5 -4.364 -14.002 19.322 1 57.15 ? C03 OVV 301 A 1 
HETATM 4 C C04 OVV . . . E 5 -3.407 -13.039 19.05 1 52.9 ? C04 OVV 301 A 1 
HETATM 5 C C05 OVV . . . E 5 -2.592 -13.176 17.939 1 53.5 ? C05 OVV 301 A 1 
HETATM 6 C C06 OVV . . . E 5 -2.728 -14.282 17.111 1 57.34 ? C06 OVV 301 A 1 
HETATM 7 C C07 OVV . . . E 5 -3.697 -15.237 17.39 1 49.78 ? C07 OVV 301 A 1 
HETATM 8 C C08 OVV . . . E 5 -1.857 -14.445 15.913 1 61.32 ? C08 OVV 301 A 1 
HETATM 9 O O09 OVV . . . E 5 -2.246 -15.22 15.041 1 75.7 ? O09 OVV 301 A 1 
HETATM 10 O O10 OVV . . . E 5 -0.804 -13.798 15.856 1 57.71 ? O10 OVV 301 A 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           63 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           1408 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           10 
#