data_7ZUP # _model_server_result.job_id 0VOxnfUI0XQZy85cG5nOzw _model_server_result.datetime_utc '2024-11-08 20:53:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zup # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 7ZUP # _exptl.entry_id 7ZUP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZUP _cell.length_a 104.282 _cell.length_b 138.654 _cell.length_c 178.871 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 216 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 208 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 255 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 247 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.036 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7ZUP _atom_sites.fract_transf_matrix[1][1] 0.009589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MTA A 1 701 1000 MTA MTA . D 4 JYX A 1 702 1001 JYX 987 . E 5 GOL A 1 703 2 GOL GOL . F 5 GOL B 1 401 1 GOL GOL . G 6 HOH A 1 801 46 HOH HOH . G 6 HOH A 2 802 21 HOH HOH . G 6 HOH A 3 803 113 HOH HOH . G 6 HOH A 4 804 130 HOH HOH . G 6 HOH A 5 805 47 HOH HOH . G 6 HOH A 6 806 123 HOH HOH . G 6 HOH A 7 807 150 HOH HOH . G 6 HOH A 8 808 71 HOH HOH . G 6 HOH A 9 809 131 HOH HOH . G 6 HOH A 10 810 160 HOH HOH . G 6 HOH A 11 811 118 HOH HOH . G 6 HOH A 12 812 67 HOH HOH . G 6 HOH A 13 813 75 HOH HOH . G 6 HOH A 14 814 69 HOH HOH . G 6 HOH A 15 815 125 HOH HOH . G 6 HOH A 16 816 15 HOH HOH . G 6 HOH A 17 817 65 HOH HOH . G 6 HOH A 18 818 8 HOH HOH . G 6 HOH A 19 819 139 HOH HOH . G 6 HOH A 20 820 16 HOH HOH . G 6 HOH A 21 821 132 HOH HOH . G 6 HOH A 22 822 173 HOH HOH . G 6 HOH A 23 823 77 HOH HOH . G 6 HOH A 24 824 144 HOH HOH . G 6 HOH A 25 825 29 HOH HOH . G 6 HOH A 26 826 73 HOH HOH . G 6 HOH A 27 827 147 HOH HOH . G 6 HOH A 28 828 121 HOH HOH . G 6 HOH A 29 829 62 HOH HOH . G 6 HOH A 30 830 116 HOH HOH . G 6 HOH A 31 831 164 HOH HOH . G 6 HOH A 32 832 138 HOH HOH . G 6 HOH A 33 833 9 HOH HOH . G 6 HOH A 34 834 36 HOH HOH . G 6 HOH A 35 835 64 HOH HOH . G 6 HOH A 36 836 37 HOH HOH . G 6 HOH A 37 837 20 HOH HOH . G 6 HOH A 38 838 79 HOH HOH . G 6 HOH A 39 839 170 HOH HOH . G 6 HOH A 40 840 114 HOH HOH . G 6 HOH A 41 841 145 HOH HOH . G 6 HOH A 42 842 124 HOH HOH . G 6 HOH A 43 843 168 HOH HOH . G 6 HOH A 44 844 14 HOH HOH . G 6 HOH A 45 845 45 HOH HOH . G 6 HOH A 46 846 149 HOH HOH . G 6 HOH A 47 847 162 HOH HOH . G 6 HOH A 48 848 1 HOH HOH . G 6 HOH A 49 849 167 HOH HOH . G 6 HOH A 50 850 152 HOH HOH . G 6 HOH A 51 851 76 HOH HOH . G 6 HOH A 52 852 126 HOH HOH . G 6 HOH A 53 853 128 HOH HOH . G 6 HOH A 54 854 120 HOH HOH . G 6 HOH A 55 855 217 HOH HOH . G 6 HOH A 56 856 27 HOH HOH . G 6 HOH A 57 857 117 HOH HOH . G 6 HOH A 58 858 161 HOH HOH . G 6 HOH A 59 859 153 HOH HOH . G 6 HOH A 60 860 72 HOH HOH . G 6 HOH A 61 861 142 HOH HOH . G 6 HOH A 62 862 141 HOH HOH . G 6 HOH A 63 863 155 HOH HOH . G 6 HOH A 64 864 146 HOH HOH . G 6 HOH A 65 865 159 HOH HOH . G 6 HOH A 66 866 191 HOH HOH . G 6 HOH A 67 867 3 HOH HOH . G 6 HOH A 68 868 13 HOH HOH . G 6 HOH A 69 869 54 HOH HOH . G 6 HOH A 70 870 182 HOH HOH . G 6 HOH A 71 871 158 HOH HOH . G 6 HOH A 72 872 5 HOH HOH . G 6 HOH A 73 873 174 HOH HOH . G 6 HOH A 74 874 140 HOH HOH . G 6 HOH A 75 875 143 HOH HOH . G 6 HOH A 76 876 115 HOH HOH . G 6 HOH A 77 877 129 HOH HOH . G 6 HOH A 78 878 122 HOH HOH . G 6 HOH A 79 879 50 HOH HOH . G 6 HOH A 80 880 156 HOH HOH . G 6 HOH A 81 881 53 HOH HOH . G 6 HOH A 82 882 136 HOH HOH . G 6 HOH A 83 883 179 HOH HOH . G 6 HOH A 84 884 18 HOH HOH . G 6 HOH A 85 885 183 HOH HOH . G 6 HOH A 86 886 38 HOH HOH . G 6 HOH A 87 887 48 HOH HOH . G 6 HOH A 88 888 119 HOH HOH . G 6 HOH A 89 889 60 HOH HOH . G 6 HOH A 90 890 52 HOH HOH . G 6 HOH A 91 891 190 HOH HOH . G 6 HOH A 92 892 169 HOH HOH . G 6 HOH A 93 893 7 HOH HOH . G 6 HOH A 94 894 172 HOH HOH . G 6 HOH A 95 895 151 HOH HOH . G 6 HOH A 96 896 165 HOH HOH . G 6 HOH A 97 897 175 HOH HOH . G 6 HOH A 98 898 55 HOH HOH . G 6 HOH A 99 899 49 HOH HOH . G 6 HOH A 100 900 157 HOH HOH . G 6 HOH A 101 901 163 HOH HOH . G 6 HOH A 102 902 137 HOH HOH . G 6 HOH A 103 903 32 HOH HOH . G 6 HOH A 104 904 188 HOH HOH . G 6 HOH A 105 905 2 HOH HOH . G 6 HOH A 106 906 63 HOH HOH . G 6 HOH A 107 907 23 HOH HOH . G 6 HOH A 108 908 154 HOH HOH . G 6 HOH A 109 909 59 HOH HOH . G 6 HOH A 110 910 127 HOH HOH . G 6 HOH A 111 911 34 HOH HOH . G 6 HOH A 112 912 185 HOH HOH . G 6 HOH A 113 913 78 HOH HOH . G 6 HOH A 114 914 134 HOH HOH . G 6 HOH A 115 915 186 HOH HOH . G 6 HOH A 116 916 11 HOH HOH . G 6 HOH A 117 917 35 HOH HOH . G 6 HOH A 118 918 207 HOH HOH . G 6 HOH A 119 919 135 HOH HOH . G 6 HOH A 120 920 193 HOH HOH . G 6 HOH A 121 921 6 HOH HOH . G 6 HOH A 122 922 41 HOH HOH . G 6 HOH A 123 923 10 HOH HOH . G 6 HOH A 124 924 12 HOH HOH . G 6 HOH A 125 925 133 HOH HOH . G 6 HOH A 126 926 25 HOH HOH . G 6 HOH A 127 927 39 HOH HOH . G 6 HOH A 128 928 68 HOH HOH . G 6 HOH A 129 929 28 HOH HOH . G 6 HOH A 130 930 189 HOH HOH . G 6 HOH A 131 931 181 HOH HOH . G 6 HOH A 132 932 184 HOH HOH . G 6 HOH A 133 933 187 HOH HOH . G 6 HOH A 134 934 17 HOH HOH . G 6 HOH A 135 935 31 HOH HOH . G 6 HOH A 136 936 148 HOH HOH . G 6 HOH A 137 937 166 HOH HOH . G 6 HOH A 138 938 43 HOH HOH . G 6 HOH A 139 939 66 HOH HOH . G 6 HOH A 140 940 30 HOH HOH . G 6 HOH A 141 941 57 HOH HOH . G 6 HOH A 142 942 4 HOH HOH . G 6 HOH A 143 943 58 HOH HOH . G 6 HOH A 144 944 177 HOH HOH . G 6 HOH A 145 945 171 HOH HOH . G 6 HOH A 146 946 196 HOH HOH . G 6 HOH A 147 947 176 HOH HOH . G 6 HOH A 148 948 22 HOH HOH . G 6 HOH A 149 949 195 HOH HOH . G 6 HOH A 150 950 19 HOH HOH . G 6 HOH A 151 951 51 HOH HOH . G 6 HOH A 152 952 44 HOH HOH . G 6 HOH A 153 953 24 HOH HOH . G 6 HOH A 154 954 56 HOH HOH . G 6 HOH A 155 955 205 HOH HOH . G 6 HOH A 156 956 208 HOH HOH . G 6 HOH A 157 957 178 HOH HOH . G 6 HOH A 158 958 202 HOH HOH . G 6 HOH A 159 959 204 HOH HOH . G 6 HOH A 160 960 33 HOH HOH . G 6 HOH A 161 961 192 HOH HOH . G 6 HOH A 162 962 198 HOH HOH . G 6 HOH A 163 963 212 HOH HOH . G 6 HOH A 164 964 74 HOH HOH . G 6 HOH A 165 965 197 HOH HOH . G 6 HOH A 166 966 194 HOH HOH . G 6 HOH A 167 967 199 HOH HOH . G 6 HOH A 168 968 216 HOH HOH . G 6 HOH A 169 969 210 HOH HOH . G 6 HOH A 170 970 206 HOH HOH . G 6 HOH A 171 971 215 HOH HOH . G 6 HOH A 172 972 180 HOH HOH . G 6 HOH A 173 973 200 HOH HOH . G 6 HOH A 174 974 211 HOH HOH . G 6 HOH A 175 975 209 HOH HOH . G 6 HOH A 176 976 42 HOH HOH . G 6 HOH A 177 977 213 HOH HOH . G 6 HOH A 178 978 203 HOH HOH . G 6 HOH A 179 979 214 HOH HOH . G 6 HOH A 180 980 201 HOH HOH . G 6 HOH A 181 981 61 HOH HOH . G 6 HOH A 182 982 70 HOH HOH . H 6 HOH B 1 501 87 HOH HOH . H 6 HOH B 2 502 89 HOH HOH . H 6 HOH B 3 503 94 HOH HOH . H 6 HOH B 4 504 92 HOH HOH . H 6 HOH B 5 505 90 HOH HOH . H 6 HOH B 6 506 99 HOH HOH . H 6 HOH B 7 507 97 HOH HOH . H 6 HOH B 8 508 100 HOH HOH . H 6 HOH B 9 509 96 HOH HOH . H 6 HOH B 10 510 95 HOH HOH . H 6 HOH B 11 511 40 HOH HOH . H 6 HOH B 12 512 104 HOH HOH . H 6 HOH B 13 513 93 HOH HOH . H 6 HOH B 14 514 26 HOH HOH . H 6 HOH B 15 515 84 HOH HOH . H 6 HOH B 16 516 88 HOH HOH . H 6 HOH B 17 517 91 HOH HOH . H 6 HOH B 18 518 85 HOH HOH . H 6 HOH B 19 519 102 HOH HOH . H 6 HOH B 20 520 81 HOH HOH . H 6 HOH B 21 521 98 HOH HOH . H 6 HOH B 22 522 82 HOH HOH . H 6 HOH B 23 523 108 HOH HOH . H 6 HOH B 24 524 80 HOH HOH . H 6 HOH B 25 525 107 HOH HOH . H 6 HOH B 26 526 103 HOH HOH . H 6 HOH B 27 527 86 HOH HOH . H 6 HOH B 28 528 109 HOH HOH . H 6 HOH B 29 529 111 HOH HOH . H 6 HOH B 30 530 112 HOH HOH . H 6 HOH B 31 531 105 HOH HOH . H 6 HOH B 32 532 83 HOH HOH . H 6 HOH B 33 533 101 HOH HOH . H 6 HOH B 34 534 110 HOH HOH . H 6 HOH B 35 535 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 5 30.206 -80.844 -14.831 1 46.27 ? C1 GOL 703 A 1 HETATM 2 O O1 GOL . . . E 5 29.352 -79.795 -15.277 1 45.12 ? O1 GOL 703 A 1 HETATM 3 C C2 GOL . . . E 5 31.292 -80.305 -13.929 1 46.65 ? C2 GOL 703 A 1 HETATM 4 O O2 GOL . . . E 5 31.657 -79.002 -14.379 1 46.78 ? O2 GOL 703 A 1 HETATM 5 C C3 GOL . . . E 5 30.881 -80.238 -12.476 1 48.29 ? C3 GOL 703 A 1 HETATM 6 O O3 GOL . . . E 5 31.968 -80.559 -11.613 1 50.54 ? O3 GOL 703 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #