data_7ZUQ # _model_server_result.job_id LIRt6tDxkoayEb2O_Zt1CQ _model_server_result.datetime_utc '2024-11-08 21:08:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zuq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 7ZUQ # _exptl.entry_id 7ZUQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZUQ _cell.length_a 102.862 _cell.length_b 138.228 _cell.length_c 178.365 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZUQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 216 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 208 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 255 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 247 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.021 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7ZUQ _atom_sites.fract_transf_matrix[1][1] 0.009722 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007234 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MTA A 1 701 701 MTA MTA . D 4 GOL A 1 702 703 GOL GOL . E 5 UNL A 1 703 1001 UNL UNL . F 4 GOL B 1 401 401 GOL GOL . G 6 HOH A 1 801 801 HOH HOH . G 6 HOH A 2 802 806 HOH HOH . G 6 HOH A 3 803 812 HOH HOH . G 6 HOH A 4 804 852 HOH HOH . G 6 HOH A 5 805 831 HOH HOH . G 6 HOH A 6 806 834 HOH HOH . G 6 HOH A 7 807 846 HOH HOH . G 6 HOH A 8 808 830 HOH HOH . G 6 HOH A 9 809 811 HOH HOH . G 6 HOH A 10 810 813 HOH HOH . G 6 HOH A 11 811 827 HOH HOH . G 6 HOH A 12 812 850 HOH HOH . G 6 HOH A 13 813 822 HOH HOH . G 6 HOH A 14 814 849 HOH HOH . G 6 HOH A 15 815 854 HOH HOH . G 6 HOH A 16 816 802 HOH HOH . G 6 HOH A 17 817 845 HOH HOH . G 6 HOH A 18 818 836 HOH HOH . G 6 HOH A 19 819 843 HOH HOH . G 6 HOH A 20 820 838 HOH HOH . G 6 HOH A 21 821 814 HOH HOH . G 6 HOH A 22 822 858 HOH HOH . G 6 HOH A 23 823 868 HOH HOH . G 6 HOH A 24 824 833 HOH HOH . G 6 HOH A 25 825 803 HOH HOH . G 6 HOH A 26 826 832 HOH HOH . G 6 HOH A 27 827 857 HOH HOH . G 6 HOH A 28 828 877 HOH HOH . G 6 HOH A 29 829 820 HOH HOH . G 6 HOH A 30 830 842 HOH HOH . G 6 HOH A 31 831 889 HOH HOH . G 6 HOH A 32 832 847 HOH HOH . G 6 HOH A 33 833 848 HOH HOH . G 6 HOH A 34 834 816 HOH HOH . G 6 HOH A 35 835 885 HOH HOH . G 6 HOH A 36 836 807 HOH HOH . G 6 HOH A 37 837 810 HOH HOH . G 6 HOH A 38 838 873 HOH HOH . G 6 HOH A 39 839 825 HOH HOH . G 6 HOH A 40 840 824 HOH HOH . G 6 HOH A 41 841 804 HOH HOH . G 6 HOH A 42 842 823 HOH HOH . G 6 HOH A 43 843 826 HOH HOH . G 6 HOH A 44 844 507 HOH HOH . G 6 HOH A 45 845 853 HOH HOH . G 6 HOH A 46 846 856 HOH HOH . G 6 HOH A 47 847 519 HOH HOH . G 6 HOH A 48 848 828 HOH HOH . G 6 HOH A 49 849 809 HOH HOH . G 6 HOH A 50 850 876 HOH HOH . G 6 HOH A 51 851 808 HOH HOH . G 6 HOH A 52 852 888 HOH HOH . G 6 HOH A 53 853 865 HOH HOH . G 6 HOH A 54 854 860 HOH HOH . G 6 HOH A 55 855 851 HOH HOH . G 6 HOH A 56 856 805 HOH HOH . G 6 HOH A 57 857 835 HOH HOH . G 6 HOH A 58 858 906 HOH HOH . G 6 HOH A 59 859 883 HOH HOH . G 6 HOH A 60 860 844 HOH HOH . G 6 HOH A 61 861 859 HOH HOH . G 6 HOH A 62 862 829 HOH HOH . G 6 HOH A 63 863 841 HOH HOH . G 6 HOH A 64 864 878 HOH HOH . G 6 HOH A 65 865 867 HOH HOH . G 6 HOH A 66 866 855 HOH HOH . G 6 HOH A 67 867 517 HOH HOH . G 6 HOH A 68 868 837 HOH HOH . G 6 HOH A 69 869 895 HOH HOH . G 6 HOH A 70 870 880 HOH HOH . G 6 HOH A 71 871 886 HOH HOH . G 6 HOH A 72 872 882 HOH HOH . G 6 HOH A 73 873 891 HOH HOH . G 6 HOH A 74 874 892 HOH HOH . G 6 HOH A 75 875 911 HOH HOH . G 6 HOH A 76 876 884 HOH HOH . G 6 HOH A 77 877 840 HOH HOH . G 6 HOH A 78 878 505 HOH HOH . G 6 HOH A 79 879 520 HOH HOH . G 6 HOH A 80 880 871 HOH HOH . G 6 HOH A 81 881 910 HOH HOH . G 6 HOH A 82 882 898 HOH HOH . G 6 HOH A 83 883 904 HOH HOH . G 6 HOH A 84 884 817 HOH HOH . G 6 HOH A 85 885 887 HOH HOH . G 6 HOH A 86 886 870 HOH HOH . G 6 HOH A 87 887 861 HOH HOH . G 6 HOH A 88 888 818 HOH HOH . G 6 HOH A 89 889 879 HOH HOH . G 6 HOH A 90 890 863 HOH HOH . G 6 HOH A 91 891 864 HOH HOH . G 6 HOH A 92 892 1 HOH HOH . G 6 HOH A 93 893 869 HOH HOH . G 6 HOH A 94 894 901 HOH HOH . G 6 HOH A 95 895 890 HOH HOH . G 6 HOH A 96 896 899 HOH HOH . G 6 HOH A 97 897 821 HOH HOH . G 6 HOH A 98 898 819 HOH HOH . G 6 HOH A 99 899 866 HOH HOH . G 6 HOH A 100 900 905 HOH HOH . G 6 HOH A 101 901 900 HOH HOH . G 6 HOH A 102 902 893 HOH HOH . G 6 HOH A 103 903 894 HOH HOH . G 6 HOH A 104 904 872 HOH HOH . G 6 HOH A 105 905 909 HOH HOH . G 6 HOH A 106 906 874 HOH HOH . G 6 HOH A 107 907 896 HOH HOH . G 6 HOH A 108 908 862 HOH HOH . G 6 HOH A 109 909 875 HOH HOH . G 6 HOH A 110 910 523 HOH HOH . G 6 HOH A 111 911 897 HOH HOH . G 6 HOH A 112 912 902 HOH HOH . G 6 HOH A 113 913 908 HOH HOH . G 6 HOH A 114 914 881 HOH HOH . G 6 HOH A 115 915 815 HOH HOH . G 6 HOH A 116 916 903 HOH HOH . G 6 HOH A 117 917 912 HOH HOH . G 6 HOH A 118 918 907 HOH HOH . H 6 HOH B 1 501 509 HOH HOH . H 6 HOH B 2 502 503 HOH HOH . H 6 HOH B 3 503 504 HOH HOH . H 6 HOH B 4 504 501 HOH HOH . H 6 HOH B 5 505 506 HOH HOH . H 6 HOH B 6 506 513 HOH HOH . H 6 HOH B 7 507 511 HOH HOH . H 6 HOH B 8 508 518 HOH HOH . H 6 HOH B 9 509 510 HOH HOH . H 6 HOH B 10 510 514 HOH HOH . H 6 HOH B 11 511 512 HOH HOH . H 6 HOH B 12 512 502 HOH HOH . H 6 HOH B 13 513 516 HOH HOH . H 6 HOH B 14 514 508 HOH HOH . H 6 HOH B 15 515 522 HOH HOH . H 6 HOH B 16 516 525 HOH HOH . H 6 HOH B 17 517 524 HOH HOH . H 6 HOH B 18 518 515 HOH HOH . H 6 HOH B 19 519 527 HOH HOH . H 6 HOH B 20 520 528 HOH HOH . H 6 HOH B 21 521 521 HOH HOH . H 6 HOH B 22 522 526 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 11.047 -101.088 -44.989 1 43.85 ? C1 GOL 401 B 1 HETATM 2 O O1 GOL . . . F 4 9.653 -101.395 -44.946 1 42.82 ? O1 GOL 401 B 1 HETATM 3 C C2 GOL . . . F 4 11.664 -100.95 -43.607 1 44.13 ? C2 GOL 401 B 1 HETATM 4 O O2 GOL . . . F 4 13.078 -100.793 -43.714 1 43.46 ? O2 GOL 401 B 1 HETATM 5 C C3 GOL . . . F 4 11.122 -99.775 -42.824 1 44.81 ? C3 GOL 401 B 1 HETATM 6 O O3 GOL . . . F 4 10.047 -100.157 -41.974 1 46.16 ? O3 GOL 401 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #