data_7ZVR # _model_server_result.job_id VMRSLxolfnoFdh3etciggg _model_server_result.datetime_utc '2024-11-06 07:35:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zvr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7ZVR # _exptl.entry_id 7ZVR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 568.871 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZVR _cell.length_a 62.688 _cell.length_b 66.528 _cell.length_c 120.516 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZVR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C40 H56 O2' _chem_comp.formula_weight 568.871 _chem_comp.id ZEX _chem_comp.mon_nstd_flag . _chem_comp.name (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C1 ZEX sing 376 n n C6 C5 ZEX doub 377 n n C6 C7 ZEX sing 378 n n C17 C1 ZEX sing 379 n n C17 H171 ZEX sing 380 n n C17 H172 ZEX sing 381 n n C17 H173 ZEX sing 382 n n C4 C3 ZEX sing 383 n n C4 C5 ZEX sing 384 n n C4 H41 ZEX sing 385 n n C4 H42 ZEX sing 386 n n C3 O3 ZEX sing 387 n n C3 C2 ZEX sing 388 n n C3 H3 ZEX sing 389 n n O3 HO3 ZEX sing 390 n n C2 C1 ZEX sing 391 n n C2 H21 ZEX sing 392 n n C2 H22 ZEX sing 393 n n C1 C16 ZEX sing 394 n n C5 C18 ZEX sing 395 n n C18 H181 ZEX sing 396 n n C18 H182 ZEX sing 397 n n C18 H183 ZEX sing 398 n n C16 H161 ZEX sing 399 n n C16 H162 ZEX sing 400 n n C16 H163 ZEX sing 401 n n O23 C23 ZEX sing 402 n n O23 H1 ZEX sing 403 n n C26 C27 ZEX sing 404 n n C26 C21 ZEX sing 405 n n C26 C25 ZEX doub 406 n n C7 C8 ZEX doub 407 e n C7 H7 ZEX sing 408 n n C8 C9 ZEX sing 409 n n C8 H8 ZEX sing 410 n n C9 C19 ZEX sing 411 n n C9 C10 ZEX doub 412 e n C19 H191 ZEX sing 413 n n C19 H192 ZEX sing 414 n n C19 H193 ZEX sing 415 n n C10 C11 ZEX sing 416 n n C10 H10 ZEX sing 417 n n C11 C12 ZEX doub 418 e n C11 H11 ZEX sing 419 n n C12 C13 ZEX sing 420 n n C12 H12 ZEX sing 421 n n C13 C20 ZEX sing 422 n n C13 C14 ZEX doub 423 e n C20 H201 ZEX sing 424 n n C20 H202 ZEX sing 425 n n C20 H203 ZEX sing 426 n n C14 C15 ZEX sing 427 n n C14 H14 ZEX sing 428 n n C15 C35 ZEX doub 429 e n C15 H15 ZEX sing 430 n n C35 C34 ZEX sing 431 n n C35 H35 ZEX sing 432 n n C34 C33 ZEX doub 433 e n C34 H34 ZEX sing 434 n n C33 C40 ZEX sing 435 n n C33 C32 ZEX sing 436 n n C40 H401 ZEX sing 437 n n C40 H402 ZEX sing 438 n n C40 H403 ZEX sing 439 n n C32 C31 ZEX doub 440 e n C32 H32 ZEX sing 441 n n C31 C30 ZEX sing 442 n n C31 H31 ZEX sing 443 n n C30 C29 ZEX doub 444 e n C30 H30 ZEX sing 445 n n C29 C39 ZEX sing 446 n n C29 C28 ZEX sing 447 n n C39 H391 ZEX sing 448 n n C39 H392 ZEX sing 449 n n C39 H393 ZEX sing 450 n n C28 C27 ZEX doub 451 e n C28 H28 ZEX sing 452 n n C27 H27 ZEX sing 453 n n C21 C36 ZEX sing 454 n n C21 C37 ZEX sing 455 n n C21 C22 ZEX sing 456 n n C36 H361 ZEX sing 457 n n C36 H362 ZEX sing 458 n n C36 H363 ZEX sing 459 n n C37 H371 ZEX sing 460 n n C37 H372 ZEX sing 461 n n C37 H373 ZEX sing 462 n n C22 C23 ZEX sing 463 n n C22 H221 ZEX sing 464 n n C22 H222 ZEX sing 465 n n C23 C24 ZEX sing 466 n n C23 H23 ZEX sing 467 n n C24 C25 ZEX sing 468 n n C24 C38 ZEX sing 469 n n C24 H24 ZEX sing 470 n n C25 H25 ZEX sing 471 n n C38 H381 ZEX sing 472 n n C38 H382 ZEX sing 473 n n C38 H383 ZEX sing 474 n n # _atom_sites.entry_id 7ZVR _atom_sites.fract_transf_matrix[1][1] 0.015952 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZEX A 1 301 345 ZEX ZEX . C 3 HOH A 1 401 184 HOH HOH . C 3 HOH A 2 402 133 HOH HOH . C 3 HOH A 3 403 189 HOH HOH . C 3 HOH A 4 404 43 HOH HOH . C 3 HOH A 5 405 3 HOH HOH . C 3 HOH A 6 406 124 HOH HOH . C 3 HOH A 7 407 191 HOH HOH . C 3 HOH A 8 408 97 HOH HOH . C 3 HOH A 9 409 178 HOH HOH . C 3 HOH A 10 410 74 HOH HOH . C 3 HOH A 11 411 123 HOH HOH . C 3 HOH A 12 412 99 HOH HOH . C 3 HOH A 13 413 33 HOH HOH . C 3 HOH A 14 414 10 HOH HOH . C 3 HOH A 15 415 167 HOH HOH . C 3 HOH A 16 416 134 HOH HOH . C 3 HOH A 17 417 177 HOH HOH . C 3 HOH A 18 418 138 HOH HOH . C 3 HOH A 19 419 158 HOH HOH . C 3 HOH A 20 420 5 HOH HOH . C 3 HOH A 21 421 49 HOH HOH . C 3 HOH A 22 422 12 HOH HOH . C 3 HOH A 23 423 52 HOH HOH . C 3 HOH A 24 424 47 HOH HOH . C 3 HOH A 25 425 45 HOH HOH . C 3 HOH A 26 426 46 HOH HOH . C 3 HOH A 27 427 100 HOH HOH . C 3 HOH A 28 428 4 HOH HOH . C 3 HOH A 29 429 132 HOH HOH . C 3 HOH A 30 430 101 HOH HOH . C 3 HOH A 31 431 67 HOH HOH . C 3 HOH A 32 432 170 HOH HOH . C 3 HOH A 33 433 48 HOH HOH . C 3 HOH A 34 434 93 HOH HOH . C 3 HOH A 35 435 162 HOH HOH . C 3 HOH A 36 436 153 HOH HOH . C 3 HOH A 37 437 166 HOH HOH . C 3 HOH A 38 438 94 HOH HOH . C 3 HOH A 39 439 76 HOH HOH . C 3 HOH A 40 440 86 HOH HOH . C 3 HOH A 41 441 199 HOH HOH . C 3 HOH A 42 442 71 HOH HOH . C 3 HOH A 43 443 129 HOH HOH . C 3 HOH A 44 444 141 HOH HOH . C 3 HOH A 45 445 2 HOH HOH . C 3 HOH A 46 446 187 HOH HOH . C 3 HOH A 47 447 34 HOH HOH . C 3 HOH A 48 448 77 HOH HOH . C 3 HOH A 49 449 82 HOH HOH . C 3 HOH A 50 450 22 HOH HOH . C 3 HOH A 51 451 135 HOH HOH . C 3 HOH A 52 452 102 HOH HOH . C 3 HOH A 53 453 186 HOH HOH . C 3 HOH A 54 454 8 HOH HOH . C 3 HOH A 55 455 196 HOH HOH . C 3 HOH A 56 456 173 HOH HOH . C 3 HOH A 57 457 160 HOH HOH . C 3 HOH A 58 458 36 HOH HOH . C 3 HOH A 59 459 28 HOH HOH . C 3 HOH A 60 460 128 HOH HOH . C 3 HOH A 61 461 26 HOH HOH . C 3 HOH A 62 462 200 HOH HOH . C 3 HOH A 63 463 190 HOH HOH . C 3 HOH A 64 464 114 HOH HOH . C 3 HOH A 65 465 58 HOH HOH . C 3 HOH A 66 466 98 HOH HOH . C 3 HOH A 67 467 21 HOH HOH . C 3 HOH A 68 468 68 HOH HOH . C 3 HOH A 69 469 104 HOH HOH . C 3 HOH A 70 470 50 HOH HOH . C 3 HOH A 71 471 130 HOH HOH . C 3 HOH A 72 472 27 HOH HOH . C 3 HOH A 73 473 44 HOH HOH . C 3 HOH A 74 474 20 HOH HOH . C 3 HOH A 75 475 61 HOH HOH . C 3 HOH A 76 476 30 HOH HOH . C 3 HOH A 77 477 75 HOH HOH . C 3 HOH A 78 478 72 HOH HOH . C 3 HOH A 79 479 1 HOH HOH . C 3 HOH A 80 480 51 HOH HOH . C 3 HOH A 81 481 156 HOH HOH . C 3 HOH A 82 482 7 HOH HOH . C 3 HOH A 83 483 32 HOH HOH . C 3 HOH A 84 484 188 HOH HOH . C 3 HOH A 85 485 117 HOH HOH . C 3 HOH A 86 486 171 HOH HOH . C 3 HOH A 87 487 29 HOH HOH . C 3 HOH A 88 488 14 HOH HOH . C 3 HOH A 89 489 70 HOH HOH . C 3 HOH A 90 490 165 HOH HOH . C 3 HOH A 91 491 195 HOH HOH . C 3 HOH A 92 492 6 HOH HOH . C 3 HOH A 93 493 122 HOH HOH . C 3 HOH A 94 494 59 HOH HOH . C 3 HOH A 95 495 96 HOH HOH . C 3 HOH A 96 496 151 HOH HOH . C 3 HOH A 97 497 69 HOH HOH . C 3 HOH A 98 498 18 HOH HOH . C 3 HOH A 99 499 92 HOH HOH . C 3 HOH A 100 500 144 HOH HOH . C 3 HOH A 101 501 63 HOH HOH . C 3 HOH A 102 502 161 HOH HOH . C 3 HOH A 103 503 37 HOH HOH . C 3 HOH A 104 504 81 HOH HOH . C 3 HOH A 105 505 55 HOH HOH . C 3 HOH A 106 506 13 HOH HOH . C 3 HOH A 107 507 172 HOH HOH . C 3 HOH A 108 508 65 HOH HOH . C 3 HOH A 109 509 136 HOH HOH . C 3 HOH A 110 510 159 HOH HOH . C 3 HOH A 111 511 9 HOH HOH . C 3 HOH A 112 512 192 HOH HOH . C 3 HOH A 113 513 140 HOH HOH . C 3 HOH A 114 514 179 HOH HOH . C 3 HOH A 115 515 169 HOH HOH . C 3 HOH A 116 516 137 HOH HOH . C 3 HOH A 117 517 168 HOH HOH . C 3 HOH A 118 518 108 HOH HOH . C 3 HOH A 119 519 79 HOH HOH . C 3 HOH A 120 520 95 HOH HOH . C 3 HOH A 121 521 88 HOH HOH . C 3 HOH A 122 522 182 HOH HOH . C 3 HOH A 123 523 53 HOH HOH . C 3 HOH A 124 524 91 HOH HOH . C 3 HOH A 125 525 85 HOH HOH . C 3 HOH A 126 526 139 HOH HOH . C 3 HOH A 127 527 181 HOH HOH . C 3 HOH A 128 528 157 HOH HOH . C 3 HOH A 129 529 40 HOH HOH . C 3 HOH A 130 530 163 HOH HOH . C 3 HOH A 131 531 194 HOH HOH . C 3 HOH A 132 532 180 HOH HOH . C 3 HOH A 133 533 148 HOH HOH . C 3 HOH A 134 534 185 HOH HOH . C 3 HOH A 135 535 174 HOH HOH . C 3 HOH A 136 536 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 ZEX . . . B 2 18.336 -9.565 16.362 0.6 33.31 ? C6 ZEX 301 A 1 HETATM 2 C C17 ZEX . . . B 2 16.731 -8.847 18.127 0.65 32.75 ? C17 ZEX 301 A 1 HETATM 3 C C4 ZEX . . . B 2 20.489 -10.18 17.46 0.6 33.54 ? C4 ZEX 301 A 1 HETATM 4 C C3 ZEX . . . B 2 19.749 -10.072 18.781 0.6 33.21 ? C3 ZEX 301 A 1 HETATM 5 O O3 ZEX . . . B 2 20.449 -10.804 19.78 0.6 33.07 ? O3 ZEX 301 A 1 HETATM 6 C C2 ZEX . . . B 2 18.354 -10.655 18.661 0.6 33.37 ? C2 ZEX 301 A 1 HETATM 7 C C1 ZEX . . . B 2 17.504 -10.035 17.549 0.6 33.14 ? C1 ZEX 301 A 1 HETATM 8 C C5 ZEX . . . B 2 19.633 -9.926 16.251 0.6 33.61 ? C5 ZEX 301 A 1 HETATM 9 C C18 ZEX . . . B 2 20.355 -10.108 14.946 0.6 33.72 ? C18 ZEX 301 A 1 HETATM 10 C C16 ZEX . . . B 2 16.497 -11.099 17.108 0.6 32.98 ? C16 ZEX 301 A 1 HETATM 11 C C7 ZEX . . . B 2 17.721 -8.694 15.383 0.6 32.85 ? C7 ZEX 301 A 1 HETATM 12 C C8 ZEX . . . B 2 17.195 -9.024 14.166 0.6 32.78 ? C8 ZEX 301 A 1 HETATM 13 C C9 ZEX . . . B 2 16.536 -8.144 13.293 0.6 32.56 ? C9 ZEX 301 A 1 HETATM 14 C C19 ZEX . . . B 2 16.35 -6.713 13.645 0.6 32.82 ? C19 ZEX 301 A 1 HETATM 15 C C10 ZEX . . . B 2 16.013 -8.569 12.057 0.65 32.13 ? C10 ZEX 301 A 1 HETATM 16 C C11 ZEX . . . B 2 15.296 -7.85 11.116 0.65 31.99 ? C11 ZEX 301 A 1 HETATM 17 C C12 ZEX . . . B 2 14.814 -8.337 9.914 0.6 32.24 ? C12 ZEX 301 A 1 HETATM 18 C C13 ZEX . . . B 2 14.241 -7.634 8.842 0.6 32.45 ? C13 ZEX 301 A 1 HETATM 19 C C20 ZEX . . . B 2 14.418 -6.162 8.788 0.6 32.61 ? C20 ZEX 301 A 1 HETATM 20 C C14 ZEX . . . B 2 13.479 -8.251 7.837 0.6 32.51 ? C14 ZEX 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #