data_7ZVT # _model_server_result.job_id LXNbYhF3v6snr_JBDg0M2A _model_server_result.datetime_utc '2025-04-25 22:37:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zvt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":801}' # _entry.id 7ZVT # _exptl.entry_id 7ZVT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZVT _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZVT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 A N3 DT 1 C DT 2 1_555 B N1 DA 15 D DA 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A O4 DT 1 C DT 2 1_555 B N6 DA 15 D DA 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N3 DC 2 C DC 3 1_555 B N1 DG 14 D DG 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N4 DC 2 C DC 3 1_555 B O6 DG 14 D DG 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O2 DC 2 C DC 3 1_555 B N2 DG 14 D DG 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N3 DC 3 C DC 4 1_555 B N1 DG 13 D DG 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N4 DC 3 C DC 4 1_555 B O6 DG 13 D DG 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O2 DC 3 C DC 4 1_555 B N2 DG 13 D DG 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N3 DC 4 C DC 5 1_555 B N1 DG 12 D DG 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N4 DC 4 C DC 5 1_555 B O6 DG 12 D DG 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O2 DC 4 C DC 5 1_555 B N2 DG 12 D DG 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DT 5 C DT 6 1_555 B N1 DA 11 D DA 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O4 DT 5 C DT 6 1_555 B N6 DA 11 D DA 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 6 C DC 7 1_555 B N1 DG 10 D DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 6 C DC 7 1_555 B O6 DG 10 D DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 6 C DC 7 1_555 B N2 DG 10 D DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DT 7 C DT 8 1_555 B N1 DA 9 D DA 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O4 DT 7 C DT 8 1_555 B N6 DA 9 D DA 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N1 DA 8 C DA 9 1_555 B N3 DT 8 D DT 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N6 DA 8 C DA 9 1_555 B O4 DT 8 D DT 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N1 DG 9 C DG 10 1_555 B N3 DC 7 D DC 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N2 DG 9 C DG 10 1_555 B O2 DC 7 D DC 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O6 DG 9 C DG 10 1_555 B N4 DC 7 D DC 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N1 DA 10 C DA 11 1_555 B N3 DT 6 D DT 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N6 DA 10 C DA 11 1_555 B O4 DT 6 D DT 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A N3 DT 11 C DT 12 1_555 B N1 DA 5 D DA 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A O4 DT 11 C DT 12 1_555 B N6 DA 5 D DA 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog28 A N4 DC 14 C DC 15 1_555 B O6 DG 2 D DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 299 n n C1 C6 IHP sing 300 n n C1 O11 IHP sing 301 n n C1 H1 IHP sing 302 n n C2 C3 IHP sing 303 n n C2 O12 IHP sing 304 n n C2 H2 IHP sing 305 n n C3 C4 IHP sing 306 n n C3 O13 IHP sing 307 n n C3 H3 IHP sing 308 n n C4 C5 IHP sing 309 n n C4 O14 IHP sing 310 n n C4 H4 IHP sing 311 n n C5 C6 IHP sing 312 n n C5 O15 IHP sing 313 n n C5 H5 IHP sing 314 n n C6 O16 IHP sing 315 n n C6 H6 IHP sing 316 n n O11 P1 IHP sing 317 n n P1 O21 IHP doub 318 n n P1 O31 IHP sing 319 n n P1 O41 IHP sing 320 n n O31 H31 IHP sing 321 n n O41 H41 IHP sing 322 n n O12 P2 IHP sing 323 n n P2 O22 IHP doub 324 n n P2 O32 IHP sing 325 n n P2 O42 IHP sing 326 n n O32 H32 IHP sing 327 n n O42 H42 IHP sing 328 n n O13 P3 IHP sing 329 n n P3 O23 IHP doub 330 n n P3 O33 IHP sing 331 n n P3 O43 IHP sing 332 n n O33 H33 IHP sing 333 n n O43 H43 IHP sing 334 n n O14 P4 IHP sing 335 n n P4 O24 IHP doub 336 n n P4 O34 IHP sing 337 n n P4 O44 IHP sing 338 n n O34 H34 IHP sing 339 n n O44 H44 IHP sing 340 n n O15 P5 IHP sing 341 n n P5 O25 IHP doub 342 n n P5 O35 IHP sing 343 n n P5 O45 IHP sing 344 n n O35 H35 IHP sing 345 n n O45 H45 IHP sing 346 n n O16 P6 IHP sing 347 n n P6 O26 IHP doub 348 n n P6 O36 IHP sing 349 n n P6 O46 IHP sing 350 n n O36 H36 IHP sing 351 n n O46 H46 IHP sing 352 n n # _atom_sites.entry_id 7ZVT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id IHP _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 801 _pdbx_nonpoly_scheme.auth_seq_num 601 _pdbx_nonpoly_scheme.pdb_mon_id IHP _pdbx_nonpoly_scheme.auth_mon_id IHP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . E 5 136.776 119.013 107.713 1 258.44 ? C1 IHP 801 B 1 HETATM 2 C C2 IHP . . . E 5 135.975 119.297 106.454 1 264.29 ? C2 IHP 801 B 1 HETATM 3 C C3 IHP . . . E 5 135.191 120.585 106.649 1 270.47 ? C3 IHP 801 B 1 HETATM 4 C C4 IHP . . . E 5 136.156 121.726 106.919 1 289.31 ? C4 IHP 801 B 1 HETATM 5 C C5 IHP . . . E 5 136.911 121.4 108.196 1 276.78 ? C5 IHP 801 B 1 HETATM 6 C C6 IHP . . . E 5 137.743 120.162 107.925 1 272.13 ? C6 IHP 801 B 1 HETATM 7 O O11 IHP . . . E 5 137.505 117.777 107.568 1 270.62 ? O11 IHP 801 B 1 HETATM 8 P P1 IHP . . . E 5 137.104 116.398 108.319 1 303.05 ? P1 IHP 801 B 1 HETATM 9 O O21 IHP . . . E 5 136.372 115.503 107.375 1 263.43 ? O21 IHP 801 B 1 HETATM 10 O O31 IHP . . . E 5 138.42 115.794 108.816 1 295.61 ? O31 IHP 801 B 1 HETATM 11 O O41 IHP . . . E 5 136.266 116.809 109.537 1 334.02 ? O41 IHP 801 B 1 HETATM 12 O O12 IHP . . . E 5 136.903 119.508 105.37 1 278.41 ? O12 IHP 801 B 1 HETATM 13 P P2 IHP . . . E 5 137.827 118.475 104.55 1 274.34 ? P2 IHP 801 B 1 HETATM 14 O O22 IHP . . . E 5 137.319 117.086 104.723 1 275.6 ? O22 IHP 801 B 1 HETATM 15 O O32 IHP . . . E 5 139.25 118.663 105.092 1 240.6 ? O32 IHP 801 B 1 HETATM 16 O O42 IHP . . . E 5 137.811 118.947 103.089 1 239.99 ? O42 IHP 801 B 1 HETATM 17 O O13 IHP . . . E 5 134.41 120.862 105.469 1 270.15 ? O13 IHP 801 B 1 HETATM 18 P P3 IHP . . . E 5 133.254 119.821 104.927 1 285.06 ? P3 IHP 801 B 1 HETATM 19 O O23 IHP . . . E 5 132.704 119.021 106.06 1 238.35 ? O23 IHP 801 B 1 HETATM 20 O O33 IHP . . . E 5 133.932 118.955 103.86 1 281.23 ? O33 IHP 801 B 1 HETATM 21 O O43 IHP . . . E 5 132.191 120.688 104.242 1 295.08 ? O43 IHP 801 B 1 HETATM 22 O O14 IHP . . . E 5 135.452 122.977 107.061 1 302.29 ? O14 IHP 801 B 1 HETATM 23 P P4 IHP . . . E 5 136.063 124.451 106.893 1 272.05 ? P4 IHP 801 B 1 HETATM 24 O O24 IHP . . . E 5 137.436 124.354 106.332 1 284.74 ? O24 IHP 801 B 1 HETATM 25 O O34 IHP . . . E 5 136.04 125.079 108.294 1 240.81 ? O34 IHP 801 B 1 HETATM 26 O O44 IHP . . . E 5 135.096 125.239 106.006 1 240.54 ? O44 IHP 801 B 1 HETATM 27 O O15 IHP . . . E 5 137.752 122.494 108.609 1 263.95 ? O15 IHP 801 B 1 HETATM 28 P P5 IHP . . . E 5 137.93 123.038 110.122 1 264.32 ? P5 IHP 801 B 1 HETATM 29 O O25 IHP . . . E 5 138.789 122.13 110.93 1 240.26 ? O25 IHP 801 B 1 HETATM 30 O O35 IHP . . . E 5 136.499 123.144 110.668 1 247.93 ? O35 IHP 801 B 1 HETATM 31 O O45 IHP . . . E 5 138.506 124.453 110.01 1 244.25 ? O45 IHP 801 B 1 HETATM 32 O O16 IHP . . . E 5 138.633 119.901 109.027 1 281.54 ? O16 IHP 801 B 1 HETATM 33 P P6 IHP . . . E 5 140.197 119.512 108.935 1 317.94 ? P6 IHP 801 B 1 HETATM 34 O O26 IHP . . . E 5 140.924 119.933 110.163 1 261.31 ? O26 IHP 801 B 1 HETATM 35 O O36 IHP . . . E 5 140.727 120.21 107.674 1 288.49 ? O36 IHP 801 B 1 HETATM 36 O O46 IHP . . . E 5 140.245 117.996 108.712 1 326.26 ? O46 IHP 801 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #