data_7ZW7 # _model_server_result.job_id BSrqBFHSEdEy-EK9EBf3cQ _model_server_result.datetime_utc '2024-10-10 11:26:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zw7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":506}' # _entry.id 7ZW7 # _exptl.entry_id 7ZW7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZW7 _cell.length_a 70.957 _cell.length_b 70.957 _cell.length_c 180.514 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZW7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 184 A ASP 184 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.028 ? metalc ? metalc2 A OD1 ASP 184 A ASP 184 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc3 A OD1 ASP 186 A ASP 186 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? metalc ? metalc4 A O ASP 186 A ASP 186 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc5 A ND1 HIS 188 A HIS 188 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc6 A O HIS 188 A HIS 188 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc7 A O PHE 197 A PHE 197 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc8 A O VAL 203 A VAL 203 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.017 ? metalc ? metalc9 A OG SER 207 A SER 207 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.925 ? metalc ? metalc10 A OG SER 243 A SER 243 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc11 A OD2 ASP 285 A ASP 285 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc12 B ZN ZN . A ZN 501 1_555 F O1 FMT . A FMT 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.794 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 241 n n C1 C2 PEG sing 242 n n C1 H11 PEG sing 243 n n C1 H12 PEG sing 244 n n O1 HO1 PEG sing 245 n n C2 O2 PEG sing 246 n n C2 H21 PEG sing 247 n n C2 H22 PEG sing 248 n n O2 C3 PEG sing 249 n n C3 C4 PEG sing 250 n n C3 H31 PEG sing 251 n n C3 H32 PEG sing 252 n n C4 O4 PEG sing 253 n n C4 H41 PEG sing 254 n n C4 H42 PEG sing 255 n n O4 HO4 PEG sing 256 n n # _atom_sites.entry_id 7ZW7 _atom_sites.fract_transf_matrix[1][1] 0.014093 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014093 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00554 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 501 501 ZN ZN . C 3 K A 1 502 601 K K . D 3 K A 1 503 602 K K . E 4 CL A 1 504 604 CL CL . F 5 FMT A 1 505 606 FMT FMT . G 6 PEG A 1 506 607 PEG PEG . H 5 FMT A 1 507 608 FMT FMT . I 7 HOH A 1 601 11 HOH HOH . I 7 HOH A 2 602 2 HOH HOH . I 7 HOH A 3 603 10 HOH HOH . I 7 HOH A 4 604 8 HOH HOH . I 7 HOH A 5 605 7 HOH HOH . I 7 HOH A 6 606 12 HOH HOH . I 7 HOH A 7 607 3 HOH HOH . I 7 HOH A 8 608 5 HOH HOH . I 7 HOH A 9 609 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . G 6 -18.53 30.741 16.785 1 41.79 ? C1 PEG 506 A 1 HETATM 2 O O1 PEG . . . G 6 -17.87 31.526 15.805 1 41.93 ? O1 PEG 506 A 1 HETATM 3 C C2 PEG . . . G 6 -19.747 31.447 17.305 1 43.05 ? C2 PEG 506 A 1 HETATM 4 O O2 PEG . . . G 6 -19.426 32.807 17.581 1 43.72 ? O2 PEG 506 A 1 HETATM 5 C C3 PEG . . . G 6 -20.412 33.466 18.362 1 44.97 ? C3 PEG 506 A 1 HETATM 6 C C4 PEG . . . G 6 -20.164 34.942 18.348 1 45.96 ? C4 PEG 506 A 1 HETATM 7 O O4 PEG . . . G 6 -20.244 35.463 17.032 1 46.49 ? O4 PEG 506 A 1 HETATM 8 H H11 PEG . . . G 6 -17.921 30.574 17.522 1 37.8 ? H11 PEG 506 A 1 HETATM 9 H H12 PEG . . . G 6 -18.798 29.897 16.389 1 37.8 ? H12 PEG 506 A 1 HETATM 10 H HO1 PEG . . . G 6 -17.569 32.261 16.104 1 37.8 ? HO1 PEG 506 A 1 HETATM 11 H H21 PEG . . . G 6 -20.049 31.015 18.12 1 37.8 ? H21 PEG 506 A 1 HETATM 12 H H22 PEG . . . G 6 -20.452 31.41 16.64 1 37.8 ? H22 PEG 506 A 1 HETATM 13 H H31 PEG . . . G 6 -20.371 33.141 19.275 1 37.8 ? H31 PEG 506 A 1 HETATM 14 H H32 PEG . . . G 6 -21.291 33.284 17.993 1 37.8 ? H32 PEG 506 A 1 HETATM 15 H H41 PEG . . . G 6 -19.279 35.117 18.704 1 37.8 ? H41 PEG 506 A 1 HETATM 16 H H42 PEG . . . G 6 -20.828 35.38 18.903 1 37.8 ? H42 PEG 506 A 1 HETATM 17 H HO4 PEG . . . G 6 -20.025 36.28 16.977 1 37.8 ? HO4 PEG 506 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #