data_7ZWN # _model_server_result.job_id 1-SRbBImamufDXPxCqiJYA _model_server_result.datetime_utc '2025-01-10 01:24:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zwn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":205}' # _entry.id 7ZWN # _exptl.entry_id 7ZWN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7ZWN _cell.length_a 66.453 _cell.length_b 66.453 _cell.length_c 151.203 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZWN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -25.2005 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7ZWN _atom_sites.fract_transf_matrix[1][1] 0.015048 _atom_sites.fract_transf_matrix[1][2] 0.008688 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017376 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006614 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 EDO A 1 201 1 EDO EDO . E 3 EDO A 1 202 2 EDO EDO . F 3 EDO A 1 203 3 EDO EDO . G 3 EDO A 1 204 4 EDO EDO . H 4 DMS A 1 205 1 DMS DMS . I 4 DMS A 1 206 2 DMS DMS . J 5 HOH A 1 301 114 HOH HOH . J 5 HOH A 2 302 116 HOH HOH . J 5 HOH A 3 303 96 HOH HOH . J 5 HOH A 4 304 24 HOH HOH . J 5 HOH A 5 305 67 HOH HOH . J 5 HOH A 6 306 124 HOH HOH . J 5 HOH A 7 307 64 HOH HOH . J 5 HOH A 8 308 41 HOH HOH . J 5 HOH A 9 309 9 HOH HOH . J 5 HOH A 10 310 34 HOH HOH . J 5 HOH A 11 311 66 HOH HOH . J 5 HOH A 12 312 15 HOH HOH . J 5 HOH A 13 313 36 HOH HOH . J 5 HOH A 14 314 65 HOH HOH . J 5 HOH A 15 315 3 HOH HOH . J 5 HOH A 16 316 4 HOH HOH . J 5 HOH A 17 317 37 HOH HOH . J 5 HOH A 18 318 134 HOH HOH . J 5 HOH A 19 319 108 HOH HOH . J 5 HOH A 20 320 106 HOH HOH . J 5 HOH A 21 321 1 HOH HOH . J 5 HOH A 22 322 7 HOH HOH . J 5 HOH A 23 323 5 HOH HOH . J 5 HOH A 24 324 57 HOH HOH . J 5 HOH A 25 325 119 HOH HOH . J 5 HOH A 26 326 23 HOH HOH . J 5 HOH A 27 327 112 HOH HOH . J 5 HOH A 28 328 68 HOH HOH . J 5 HOH A 29 329 20 HOH HOH . J 5 HOH A 30 330 86 HOH HOH . J 5 HOH A 31 331 8 HOH HOH . J 5 HOH A 32 332 100 HOH HOH . J 5 HOH A 33 333 110 HOH HOH . J 5 HOH A 34 334 21 HOH HOH . J 5 HOH A 35 335 130 HOH HOH . J 5 HOH A 36 336 135 HOH HOH . J 5 HOH A 37 337 32 HOH HOH . J 5 HOH A 38 338 111 HOH HOH . J 5 HOH A 39 339 98 HOH HOH . J 5 HOH A 40 340 54 HOH HOH . J 5 HOH A 41 341 121 HOH HOH . J 5 HOH A 42 342 78 HOH HOH . J 5 HOH A 43 343 70 HOH HOH . J 5 HOH A 44 344 45 HOH HOH . J 5 HOH A 45 345 109 HOH HOH . J 5 HOH A 46 346 47 HOH HOH . J 5 HOH A 47 347 26 HOH HOH . J 5 HOH A 48 348 6 HOH HOH . J 5 HOH A 49 349 22 HOH HOH . J 5 HOH A 50 350 52 HOH HOH . J 5 HOH A 51 351 118 HOH HOH . J 5 HOH A 52 352 103 HOH HOH . J 5 HOH A 53 353 50 HOH HOH . J 5 HOH A 54 354 46 HOH HOH . J 5 HOH A 55 355 2 HOH HOH . J 5 HOH A 56 356 49 HOH HOH . J 5 HOH A 57 357 16 HOH HOH . J 5 HOH A 58 358 77 HOH HOH . J 5 HOH A 59 359 35 HOH HOH . J 5 HOH A 60 360 28 HOH HOH . J 5 HOH A 61 361 29 HOH HOH . J 5 HOH A 62 362 48 HOH HOH . J 5 HOH A 63 363 19 HOH HOH . J 5 HOH A 64 364 17 HOH HOH . J 5 HOH A 65 365 13 HOH HOH . J 5 HOH A 66 366 55 HOH HOH . J 5 HOH A 67 367 85 HOH HOH . J 5 HOH A 68 368 38 HOH HOH . J 5 HOH A 69 369 51 HOH HOH . J 5 HOH A 70 370 62 HOH HOH . J 5 HOH A 71 371 122 HOH HOH . J 5 HOH A 72 372 105 HOH HOH . J 5 HOH A 73 373 44 HOH HOH . J 5 HOH A 74 374 81 HOH HOH . J 5 HOH A 75 375 75 HOH HOH . J 5 HOH A 76 376 82 HOH HOH . J 5 HOH A 77 377 113 HOH HOH . J 5 HOH A 78 378 69 HOH HOH . J 5 HOH A 79 379 93 HOH HOH . J 5 HOH A 80 380 11 HOH HOH . J 5 HOH A 81 381 84 HOH HOH . J 5 HOH A 82 382 72 HOH HOH . J 5 HOH A 83 383 42 HOH HOH . J 5 HOH A 84 384 63 HOH HOH . J 5 HOH A 85 385 56 HOH HOH . J 5 HOH A 86 386 53 HOH HOH . J 5 HOH A 87 387 127 HOH HOH . J 5 HOH A 88 388 27 HOH HOH . J 5 HOH A 89 389 33 HOH HOH . J 5 HOH A 90 390 117 HOH HOH . J 5 HOH A 91 391 128 HOH HOH . J 5 HOH A 92 392 126 HOH HOH . J 5 HOH A 93 393 104 HOH HOH . J 5 HOH A 94 394 133 HOH HOH . J 5 HOH A 95 395 88 HOH HOH . J 5 HOH A 96 396 99 HOH HOH . J 5 HOH A 97 397 30 HOH HOH . J 5 HOH A 98 398 129 HOH HOH . J 5 HOH A 99 399 115 HOH HOH . J 5 HOH A 100 400 89 HOH HOH . J 5 HOH A 101 401 91 HOH HOH . J 5 HOH A 102 402 80 HOH HOH . J 5 HOH A 103 403 59 HOH HOH . J 5 HOH A 104 404 83 HOH HOH . J 5 HOH A 105 405 79 HOH HOH . J 5 HOH A 106 406 74 HOH HOH . J 5 HOH A 107 407 71 HOH HOH . J 5 HOH A 108 408 131 HOH HOH . K 5 HOH B 1 101 40 HOH HOH . K 5 HOH B 2 102 73 HOH HOH . L 5 HOH C 1 101 136 HOH HOH . L 5 HOH C 2 102 14 HOH HOH . L 5 HOH C 3 103 12 HOH HOH . L 5 HOH C 4 104 31 HOH HOH . L 5 HOH C 5 105 60 HOH HOH . L 5 HOH C 6 106 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . H 4 -39.606 20.777 2.627 0.74 80.97 ? S DMS 205 A 1 HETATM 2 O O DMS . . . H 4 -39.621 21.425 3.947 0.74 81.32 ? O DMS 205 A 1 HETATM 3 C C1 DMS . . . H 4 -38.405 21.682 1.725 0.74 79.81 ? C1 DMS 205 A 1 HETATM 4 C C2 DMS . . . H 4 -38.659 19.297 2.871 0.74 80.81 ? C2 DMS 205 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #