data_7ZWP
#
_model_server_result.job_id            9WI-1lwjAOcCAPHUBFvzgA 
_model_server_result.datetime_utc      '2025-01-10 07:29:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7zwp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    7ZWP 
#
_exptl.entry_id    7ZWP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7ZWP 
_cell.length_a            67.27 
_cell.length_b            67.27 
_cell.length_c            164.4 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ZWP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -27.4 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7ZWP 
_atom_sites.fract_transf_matrix[1][1]    0.014865 
_atom_sites.fract_transf_matrix[1][2]    0.008583 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017165 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006083 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 K4C A 1 201 200 K4C 013 . 
D 4 EDO A 1 202 3 EDO EDO . 
E 4 EDO A 1 203 4 EDO EDO . 
F 5 HOH A 1 301 59 HOH HOH . 
F 5 HOH A 2 302 37 HOH HOH . 
F 5 HOH A 3 303 22 HOH HOH . 
F 5 HOH A 4 304 14 HOH HOH . 
F 5 HOH A 5 305 62 HOH HOH . 
F 5 HOH A 6 306 69 HOH HOH . 
F 5 HOH A 7 307 5 HOH HOH . 
F 5 HOH A 8 308 90 HOH HOH . 
F 5 HOH A 9 309 64 HOH HOH . 
F 5 HOH A 10 310 104 HOH HOH . 
F 5 HOH A 11 311 135 HOH HOH . 
F 5 HOH A 12 312 158 HOH HOH . 
F 5 HOH A 13 313 99 HOH HOH . 
F 5 HOH A 14 314 124 HOH HOH . 
F 5 HOH A 15 315 114 HOH HOH . 
F 5 HOH A 16 316 43 HOH HOH . 
F 5 HOH A 17 317 78 HOH HOH . 
F 5 HOH A 18 318 53 HOH HOH . 
F 5 HOH A 19 319 44 HOH HOH . 
F 5 HOH A 20 320 63 HOH HOH . 
F 5 HOH A 21 321 61 HOH HOH . 
F 5 HOH A 22 322 38 HOH HOH . 
F 5 HOH A 23 323 144 HOH HOH . 
F 5 HOH A 24 324 106 HOH HOH . 
F 5 HOH A 25 325 67 HOH HOH . 
F 5 HOH A 26 326 140 HOH HOH . 
F 5 HOH A 27 327 112 HOH HOH . 
F 5 HOH A 28 328 11 HOH HOH . 
F 5 HOH A 29 329 113 HOH HOH . 
F 5 HOH A 30 330 73 HOH HOH . 
F 5 HOH A 31 331 116 HOH HOH . 
F 5 HOH A 32 332 147 HOH HOH . 
F 5 HOH A 33 333 33 HOH HOH . 
F 5 HOH A 34 334 68 HOH HOH . 
F 5 HOH A 35 335 88 HOH HOH . 
F 5 HOH A 36 336 3 HOH HOH . 
F 5 HOH A 37 337 150 HOH HOH . 
F 5 HOH A 38 338 157 HOH HOH . 
F 5 HOH A 39 339 86 HOH HOH . 
F 5 HOH A 40 340 2 HOH HOH . 
F 5 HOH A 41 341 16 HOH HOH . 
F 5 HOH A 42 342 6 HOH HOH . 
F 5 HOH A 43 343 119 HOH HOH . 
F 5 HOH A 44 344 66 HOH HOH . 
F 5 HOH A 45 345 117 HOH HOH . 
F 5 HOH A 46 346 65 HOH HOH . 
F 5 HOH A 47 347 15 HOH HOH . 
F 5 HOH A 48 348 1 HOH HOH . 
F 5 HOH A 49 349 50 HOH HOH . 
F 5 HOH A 50 350 4 HOH HOH . 
F 5 HOH A 51 351 125 HOH HOH . 
F 5 HOH A 52 352 41 HOH HOH . 
F 5 HOH A 53 353 10 HOH HOH . 
F 5 HOH A 54 354 84 HOH HOH . 
F 5 HOH A 55 355 30 HOH HOH . 
F 5 HOH A 56 356 92 HOH HOH . 
F 5 HOH A 57 357 159 HOH HOH . 
F 5 HOH A 58 358 77 HOH HOH . 
F 5 HOH A 59 359 136 HOH HOH . 
F 5 HOH A 60 360 153 HOH HOH . 
F 5 HOH A 61 361 108 HOH HOH . 
F 5 HOH A 62 362 21 HOH HOH . 
F 5 HOH A 63 363 29 HOH HOH . 
F 5 HOH A 64 364 12 HOH HOH . 
F 5 HOH A 65 365 39 HOH HOH . 
F 5 HOH A 66 366 13 HOH HOH . 
F 5 HOH A 67 367 9 HOH HOH . 
F 5 HOH A 68 368 111 HOH HOH . 
F 5 HOH A 69 369 89 HOH HOH . 
F 5 HOH A 70 370 81 HOH HOH . 
F 5 HOH A 71 371 166 HOH HOH . 
F 5 HOH A 72 372 58 HOH HOH . 
F 5 HOH A 73 373 141 HOH HOH . 
F 5 HOH A 74 374 121 HOH HOH . 
F 5 HOH A 75 375 51 HOH HOH . 
F 5 HOH A 76 376 154 HOH HOH . 
F 5 HOH A 77 377 123 HOH HOH . 
F 5 HOH A 78 378 55 HOH HOH . 
F 5 HOH A 79 379 160 HOH HOH . 
F 5 HOH A 80 380 142 HOH HOH . 
F 5 HOH A 81 381 60 HOH HOH . 
F 5 HOH A 82 382 161 HOH HOH . 
F 5 HOH A 83 383 115 HOH HOH . 
F 5 HOH A 84 384 36 HOH HOH . 
F 5 HOH A 85 385 128 HOH HOH . 
F 5 HOH A 86 386 7 HOH HOH . 
F 5 HOH A 87 387 24 HOH HOH . 
F 5 HOH A 88 388 20 HOH HOH . 
F 5 HOH A 89 389 87 HOH HOH . 
F 5 HOH A 90 390 96 HOH HOH . 
F 5 HOH A 91 391 27 HOH HOH . 
F 5 HOH A 92 392 149 HOH HOH . 
F 5 HOH A 93 393 17 HOH HOH . 
F 5 HOH A 94 394 145 HOH HOH . 
F 5 HOH A 95 395 164 HOH HOH . 
F 5 HOH A 96 396 151 HOH HOH . 
F 5 HOH A 97 397 83 HOH HOH . 
F 5 HOH A 98 398 98 HOH HOH . 
F 5 HOH A 99 399 162 HOH HOH . 
F 5 HOH A 100 400 148 HOH HOH . 
F 5 HOH A 101 401 97 HOH HOH . 
F 5 HOH A 102 402 85 HOH HOH . 
F 5 HOH A 103 403 93 HOH HOH . 
F 5 HOH A 104 404 95 HOH HOH . 
F 5 HOH A 105 405 155 HOH HOH . 
F 5 HOH A 106 406 56 HOH HOH . 
F 5 HOH A 107 407 72 HOH HOH . 
F 5 HOH A 108 408 156 HOH HOH . 
F 5 HOH A 109 409 110 HOH HOH . 
F 5 HOH A 110 410 54 HOH HOH . 
F 5 HOH A 111 411 80 HOH HOH . 
F 5 HOH A 112 412 107 HOH HOH . 
F 5 HOH A 113 413 26 HOH HOH . 
F 5 HOH A 114 414 146 HOH HOH . 
F 5 HOH A 115 415 71 HOH HOH . 
F 5 HOH A 116 416 101 HOH HOH . 
F 5 HOH A 117 417 45 HOH HOH . 
F 5 HOH A 118 418 102 HOH HOH . 
F 5 HOH A 119 419 109 HOH HOH . 
F 5 HOH A 120 420 100 HOH HOH . 
F 5 HOH A 121 421 122 HOH HOH . 
F 5 HOH A 122 422 152 HOH HOH . 
F 5 HOH A 123 423 143 HOH HOH . 
F 5 HOH A 124 424 70 HOH HOH . 
F 5 HOH A 125 425 139 HOH HOH . 
F 5 HOH A 126 426 94 HOH HOH . 
G 5 HOH B 1 101 79 HOH HOH . 
G 5 HOH B 2 102 76 HOH HOH . 
G 5 HOH B 3 103 74 HOH HOH . 
G 5 HOH B 4 104 35 HOH HOH . 
G 5 HOH B 5 105 48 HOH HOH . 
G 5 HOH B 6 106 163 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 -15.886 23.368 -0.905 1 34.33 ? C1 EDO 202 A 1 
HETATM 2 O O1 EDO . . . D 4 -16.079 22.08 -0.341 1 32.79 ? O1 EDO 202 A 1 
HETATM 3 C C2 EDO . . . D 4 -14.49 23.866 -0.483 1 39.65 ? C2 EDO 202 A 1 
HETATM 4 O O2 EDO . . . D 4 -13.554 22.844 -0.808 1 44.69 ? O2 EDO 202 A 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#