data_7ZWQ
#
_model_server_result.job_id            9t_E3OxuRAZZ6JfVvKymGA 
_model_server_result.datetime_utc      '2024-11-12 21:45:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7zwq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":207}' 
#
_entry.id    7ZWQ 
#
_exptl.entry_id    7ZWQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7ZWQ 
_cell.length_a            67.16 
_cell.length_b            67.16 
_cell.length_c            165.13 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ZWQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -33.58 58.162266 27.521667 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 92 n n 
C1 C2 EDO sing 93 n n 
C1 H11 EDO sing 94 n n 
C1 H12 EDO sing 95 n n 
O1 HO1 EDO sing 96 n n 
C2 O2 EDO sing 97 n n 
C2 H21 EDO sing 98 n n 
C2 H22 EDO sing 99 n n 
O2 HO2 EDO sing 100 n n 
#
_atom_sites.entry_id                     7ZWQ 
_atom_sites.fract_transf_matrix[1][1]    0.01489 
_atom_sites.fract_transf_matrix[1][2]    0.008597 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017193 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006056 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 K4O A 1 201 200 K4O 551 . 
C 3 EDO A 1 202 1 EDO EDO . 
D 3 EDO A 1 203 2 EDO EDO . 
E 3 EDO A 1 204 3 EDO EDO . 
F 3 EDO A 1 205 4 EDO EDO . 
G 3 EDO A 1 206 5 EDO EDO . 
H 3 EDO A 1 207 6 EDO EDO . 
I 3 EDO A 1 208 7 EDO EDO . 
J 3 EDO A 1 209 9 EDO EDO . 
K 3 EDO A 1 210 10 EDO EDO . 
L 4 DMS A 1 211 1 DMS DMS . 
M 2 K4O A 1 212 1 K4O 551 . 
N 5 HOH A 1 301 130 HOH HOH . 
N 5 HOH A 2 302 47 HOH HOH . 
N 5 HOH A 3 303 110 HOH HOH . 
N 5 HOH A 4 304 76 HOH HOH . 
N 5 HOH A 5 305 5 HOH HOH . 
N 5 HOH A 6 306 140 HOH HOH . 
N 5 HOH A 7 307 64 HOH HOH . 
N 5 HOH A 8 308 42 HOH HOH . 
N 5 HOH A 9 309 29 HOH HOH . 
N 5 HOH A 10 310 10 HOH HOH . 
N 5 HOH A 11 311 36 HOH HOH . 
N 5 HOH A 12 312 26 HOH HOH . 
N 5 HOH A 13 313 65 HOH HOH . 
N 5 HOH A 14 314 113 HOH HOH . 
N 5 HOH A 15 315 126 HOH HOH . 
N 5 HOH A 16 316 123 HOH HOH . 
N 5 HOH A 17 317 95 HOH HOH . 
N 5 HOH A 18 318 118 HOH HOH . 
N 5 HOH A 19 319 66 HOH HOH . 
N 5 HOH A 20 320 116 HOH HOH . 
N 5 HOH A 21 321 34 HOH HOH . 
N 5 HOH A 22 322 54 HOH HOH . 
N 5 HOH A 23 323 27 HOH HOH . 
N 5 HOH A 24 324 115 HOH HOH . 
N 5 HOH A 25 325 51 HOH HOH . 
N 5 HOH A 26 326 149 HOH HOH . 
N 5 HOH A 27 327 105 HOH HOH . 
N 5 HOH A 28 328 16 HOH HOH . 
N 5 HOH A 29 329 72 HOH HOH . 
N 5 HOH A 30 330 112 HOH HOH . 
N 5 HOH A 31 331 25 HOH HOH . 
N 5 HOH A 32 332 12 HOH HOH . 
N 5 HOH A 33 333 18 HOH HOH . 
N 5 HOH A 34 334 20 HOH HOH . 
N 5 HOH A 35 335 111 HOH HOH . 
N 5 HOH A 36 336 3 HOH HOH . 
N 5 HOH A 37 337 7 HOH HOH . 
N 5 HOH A 38 338 19 HOH HOH . 
N 5 HOH A 39 339 136 HOH HOH . 
N 5 HOH A 40 340 1 HOH HOH . 
N 5 HOH A 41 341 77 HOH HOH . 
N 5 HOH A 42 342 128 HOH HOH . 
N 5 HOH A 43 343 62 HOH HOH . 
N 5 HOH A 44 344 68 HOH HOH . 
N 5 HOH A 45 345 22 HOH HOH . 
N 5 HOH A 46 346 8 HOH HOH . 
N 5 HOH A 47 347 114 HOH HOH . 
N 5 HOH A 48 348 49 HOH HOH . 
N 5 HOH A 49 349 69 HOH HOH . 
N 5 HOH A 50 350 2 HOH HOH . 
N 5 HOH A 51 351 67 HOH HOH . 
N 5 HOH A 52 352 23 HOH HOH . 
N 5 HOH A 53 353 93 HOH HOH . 
N 5 HOH A 54 354 50 HOH HOH . 
N 5 HOH A 55 355 11 HOH HOH . 
N 5 HOH A 56 356 59 HOH HOH . 
N 5 HOH A 57 357 4 HOH HOH . 
N 5 HOH A 58 358 14 HOH HOH . 
N 5 HOH A 59 359 87 HOH HOH . 
N 5 HOH A 60 360 107 HOH HOH . 
N 5 HOH A 61 361 91 HOH HOH . 
N 5 HOH A 62 362 52 HOH HOH . 
N 5 HOH A 63 363 61 HOH HOH . 
N 5 HOH A 64 364 117 HOH HOH . 
N 5 HOH A 65 365 56 HOH HOH . 
N 5 HOH A 66 366 145 HOH HOH . 
N 5 HOH A 67 367 85 HOH HOH . 
N 5 HOH A 68 368 48 HOH HOH . 
N 5 HOH A 69 369 60 HOH HOH . 
N 5 HOH A 70 370 127 HOH HOH . 
N 5 HOH A 71 371 35 HOH HOH . 
N 5 HOH A 72 372 155 HOH HOH . 
N 5 HOH A 73 373 86 HOH HOH . 
N 5 HOH A 74 374 132 HOH HOH . 
N 5 HOH A 75 375 15 HOH HOH . 
N 5 HOH A 76 376 43 HOH HOH . 
N 5 HOH A 77 377 82 HOH HOH . 
N 5 HOH A 78 378 70 HOH HOH . 
N 5 HOH A 79 379 33 HOH HOH . 
N 5 HOH A 80 380 153 HOH HOH . 
N 5 HOH A 81 381 120 HOH HOH . 
N 5 HOH A 82 382 37 HOH HOH . 
N 5 HOH A 83 383 24 HOH HOH . 
N 5 HOH A 84 384 73 HOH HOH . 
N 5 HOH A 85 385 154 HOH HOH . 
N 5 HOH A 86 386 79 HOH HOH . 
N 5 HOH A 87 387 90 HOH HOH . 
N 5 HOH A 88 388 134 HOH HOH . 
N 5 HOH A 89 389 71 HOH HOH . 
N 5 HOH A 90 390 40 HOH HOH . 
N 5 HOH A 91 391 147 HOH HOH . 
N 5 HOH A 92 392 45 HOH HOH . 
N 5 HOH A 93 393 131 HOH HOH . 
N 5 HOH A 94 394 75 HOH HOH . 
N 5 HOH A 95 395 97 HOH HOH . 
N 5 HOH A 96 396 129 HOH HOH . 
N 5 HOH A 97 397 142 HOH HOH . 
N 5 HOH A 98 398 121 HOH HOH . 
N 5 HOH A 99 399 138 HOH HOH . 
N 5 HOH A 100 400 58 HOH HOH . 
N 5 HOH A 101 401 135 HOH HOH . 
N 5 HOH A 102 402 139 HOH HOH . 
N 5 HOH A 103 403 144 HOH HOH . 
N 5 HOH A 104 404 151 HOH HOH . 
N 5 HOH A 105 405 152 HOH HOH . 
N 5 HOH A 106 406 81 HOH HOH . 
N 5 HOH A 107 407 102 HOH HOH . 
N 5 HOH A 108 408 103 HOH HOH . 
N 5 HOH A 109 409 137 HOH HOH . 
N 5 HOH A 110 410 150 HOH HOH . 
N 5 HOH A 111 411 80 HOH HOH . 
N 5 HOH A 112 412 109 HOH HOH . 
N 5 HOH A 113 413 146 HOH HOH . 
N 5 HOH A 114 414 100 HOH HOH . 
N 5 HOH A 115 415 125 HOH HOH . 
N 5 HOH A 116 416 148 HOH HOH . 
N 5 HOH A 117 417 133 HOH HOH . 
N 5 HOH A 118 418 92 HOH HOH . 
N 5 HOH A 119 419 96 HOH HOH . 
N 5 HOH A 120 420 30 HOH HOH . 
N 5 HOH A 121 421 122 HOH HOH . 
N 5 HOH A 122 422 157 HOH HOH . 
N 5 HOH A 123 423 156 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . H 3 -19.19 6.211 35.751 1 88.09 ? C1 EDO 207 A 1 
HETATM 2 O O1 EDO . . . H 3 -20.446 5.732 36.232 1 89.31 ? O1 EDO 207 A 1 
HETATM 3 C C2 EDO . . . H 3 -19.226 7.722 35.593 1 86.44 ? C2 EDO 207 A 1 
HETATM 4 O O2 EDO . . . H 3 -19.635 8.328 36.817 1 85.54 ? O2 EDO 207 A 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#