data_7ZWY # _model_server_result.job_id zLCbnDdAjekyhLoc0nXcGw _model_server_result.datetime_utc '2025-01-10 06:52:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zwy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7ZWY # _exptl.entry_id 7ZWY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 243.692 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloranyl-4-[(phenylmethyl)amino]pyridine-3-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7ZWY _cell.length_a 67.623 _cell.length_b 67.623 _cell.length_c 164.729 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZWY _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -27.454833 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H10 Cl N3' _chem_comp.formula_weight 243.692 _chem_comp.id K6R _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloranyl-4-[(phenylmethyl)amino]pyridine-3-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C1 K6R sing 182 n n N C1 K6R doub 183 n y N C2 K6R sing 184 n y C1 C K6R sing 185 n y C2 C3 K6R doub 186 n y C C12 K6R sing 187 n n C C4 K6R doub 188 n y C12 N2 K6R trip 189 n n C3 C4 K6R sing 190 n y C4 N1 K6R sing 191 n n N1 C5 K6R sing 192 n n C11 C10 K6R doub 193 n y C11 C6 K6R sing 194 n y C10 C9 K6R sing 195 n y C5 C6 K6R sing 196 n n C6 C7 K6R doub 197 n y C9 C8 K6R doub 198 n y C7 C8 K6R sing 199 n y C2 H1 K6R sing 200 n n C3 H2 K6R sing 201 n n C5 H3 K6R sing 202 n n C5 H4 K6R sing 203 n n C7 H5 K6R sing 204 n n C8 H6 K6R sing 205 n n C9 H7 K6R sing 206 n n C10 H8 K6R sing 207 n n C11 H9 K6R sing 208 n n N1 H10 K6R sing 209 n n # _atom_sites.entry_id 7ZWY _atom_sites.fract_transf_matrix[1][1] 0.014788 _atom_sites.fract_transf_matrix[1][2] 0.008538 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006071 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 K6R A 1 201 200 K6R 478 . D 4 EDO A 1 202 1 EDO EDO . E 5 CL A 1 203 1 CL CL . F 6 HOH A 1 301 64 HOH HOH . F 6 HOH A 2 302 9 HOH HOH . F 6 HOH A 3 303 212 HOH HOH . F 6 HOH A 4 304 171 HOH HOH . F 6 HOH A 5 305 14 HOH HOH . F 6 HOH A 6 306 25 HOH HOH . F 6 HOH A 7 307 193 HOH HOH . F 6 HOH A 8 308 59 HOH HOH . F 6 HOH A 9 309 92 HOH HOH . F 6 HOH A 10 310 30 HOH HOH . F 6 HOH A 11 311 38 HOH HOH . F 6 HOH A 12 312 209 HOH HOH . F 6 HOH A 13 313 8 HOH HOH . F 6 HOH A 14 314 91 HOH HOH . F 6 HOH A 15 315 27 HOH HOH . F 6 HOH A 16 316 163 HOH HOH . F 6 HOH A 17 317 139 HOH HOH . F 6 HOH A 18 318 198 HOH HOH . F 6 HOH A 19 319 10 HOH HOH . F 6 HOH A 20 320 172 HOH HOH . F 6 HOH A 21 321 26 HOH HOH . F 6 HOH A 22 322 192 HOH HOH . F 6 HOH A 23 323 15 HOH HOH . F 6 HOH A 24 324 185 HOH HOH . F 6 HOH A 25 325 97 HOH HOH . F 6 HOH A 26 326 104 HOH HOH . F 6 HOH A 27 327 95 HOH HOH . F 6 HOH A 28 328 190 HOH HOH . F 6 HOH A 29 329 7 HOH HOH . F 6 HOH A 30 330 28 HOH HOH . F 6 HOH A 31 331 34 HOH HOH . F 6 HOH A 32 332 188 HOH HOH . F 6 HOH A 33 333 194 HOH HOH . F 6 HOH A 34 334 108 HOH HOH . F 6 HOH A 35 335 164 HOH HOH . F 6 HOH A 36 336 83 HOH HOH . F 6 HOH A 37 337 106 HOH HOH . F 6 HOH A 38 338 140 HOH HOH . F 6 HOH A 39 339 116 HOH HOH . F 6 HOH A 40 340 49 HOH HOH . F 6 HOH A 41 341 35 HOH HOH . F 6 HOH A 42 342 87 HOH HOH . F 6 HOH A 43 343 215 HOH HOH . F 6 HOH A 44 344 67 HOH HOH . F 6 HOH A 45 345 111 HOH HOH . F 6 HOH A 46 346 68 HOH HOH . F 6 HOH A 47 347 109 HOH HOH . F 6 HOH A 48 348 117 HOH HOH . F 6 HOH A 49 349 184 HOH HOH . F 6 HOH A 50 350 51 HOH HOH . F 6 HOH A 51 351 126 HOH HOH . F 6 HOH A 52 352 94 HOH HOH . F 6 HOH A 53 353 143 HOH HOH . F 6 HOH A 54 354 31 HOH HOH . F 6 HOH A 55 355 201 HOH HOH . F 6 HOH A 56 356 98 HOH HOH . F 6 HOH A 57 357 19 HOH HOH . F 6 HOH A 58 358 175 HOH HOH . F 6 HOH A 59 359 85 HOH HOH . F 6 HOH A 60 360 21 HOH HOH . F 6 HOH A 61 361 93 HOH HOH . F 6 HOH A 62 362 206 HOH HOH . F 6 HOH A 63 363 71 HOH HOH . F 6 HOH A 64 364 5 HOH HOH . F 6 HOH A 65 365 128 HOH HOH . F 6 HOH A 66 366 183 HOH HOH . F 6 HOH A 67 367 177 HOH HOH . F 6 HOH A 68 368 174 HOH HOH . F 6 HOH A 69 369 3 HOH HOH . F 6 HOH A 70 370 119 HOH HOH . F 6 HOH A 71 371 33 HOH HOH . F 6 HOH A 72 372 4 HOH HOH . F 6 HOH A 73 373 191 HOH HOH . F 6 HOH A 74 374 195 HOH HOH . F 6 HOH A 75 375 56 HOH HOH . F 6 HOH A 76 376 13 HOH HOH . F 6 HOH A 77 377 12 HOH HOH . F 6 HOH A 78 378 205 HOH HOH . F 6 HOH A 79 379 136 HOH HOH . F 6 HOH A 80 380 189 HOH HOH . F 6 HOH A 81 381 50 HOH HOH . F 6 HOH A 82 382 214 HOH HOH . F 6 HOH A 83 383 2 HOH HOH . F 6 HOH A 84 384 149 HOH HOH . F 6 HOH A 85 385 168 HOH HOH . F 6 HOH A 86 386 132 HOH HOH . F 6 HOH A 87 387 138 HOH HOH . F 6 HOH A 88 388 213 HOH HOH . F 6 HOH A 89 389 39 HOH HOH . F 6 HOH A 90 390 73 HOH HOH . F 6 HOH A 91 391 1 HOH HOH . F 6 HOH A 92 392 17 HOH HOH . F 6 HOH A 93 393 32 HOH HOH . F 6 HOH A 94 394 22 HOH HOH . F 6 HOH A 95 395 29 HOH HOH . F 6 HOH A 96 396 105 HOH HOH . F 6 HOH A 97 397 11 HOH HOH . F 6 HOH A 98 398 53 HOH HOH . F 6 HOH A 99 399 6 HOH HOH . F 6 HOH A 100 400 18 HOH HOH . F 6 HOH A 101 401 115 HOH HOH . F 6 HOH A 102 402 186 HOH HOH . F 6 HOH A 103 403 82 HOH HOH . F 6 HOH A 104 404 43 HOH HOH . F 6 HOH A 105 405 207 HOH HOH . F 6 HOH A 106 406 20 HOH HOH . F 6 HOH A 107 407 36 HOH HOH . F 6 HOH A 108 408 147 HOH HOH . F 6 HOH A 109 409 24 HOH HOH . F 6 HOH A 110 410 146 HOH HOH . F 6 HOH A 111 411 79 HOH HOH . F 6 HOH A 112 412 69 HOH HOH . F 6 HOH A 113 413 66 HOH HOH . F 6 HOH A 114 414 99 HOH HOH . F 6 HOH A 115 415 16 HOH HOH . F 6 HOH A 116 416 47 HOH HOH . F 6 HOH A 117 417 42 HOH HOH . F 6 HOH A 118 418 182 HOH HOH . F 6 HOH A 119 419 144 HOH HOH . F 6 HOH A 120 420 65 HOH HOH . F 6 HOH A 121 421 23 HOH HOH . F 6 HOH A 122 422 54 HOH HOH . F 6 HOH A 123 423 130 HOH HOH . F 6 HOH A 124 424 113 HOH HOH . F 6 HOH A 125 425 58 HOH HOH . F 6 HOH A 126 426 55 HOH HOH . F 6 HOH A 127 427 90 HOH HOH . F 6 HOH A 128 428 187 HOH HOH . F 6 HOH A 129 429 41 HOH HOH . F 6 HOH A 130 430 125 HOH HOH . F 6 HOH A 131 431 60 HOH HOH . F 6 HOH A 132 432 72 HOH HOH . F 6 HOH A 133 433 37 HOH HOH . F 6 HOH A 134 434 88 HOH HOH . F 6 HOH A 135 435 103 HOH HOH . F 6 HOH A 136 436 46 HOH HOH . F 6 HOH A 137 437 129 HOH HOH . F 6 HOH A 138 438 180 HOH HOH . F 6 HOH A 139 439 160 HOH HOH . F 6 HOH A 140 440 181 HOH HOH . F 6 HOH A 141 441 155 HOH HOH . F 6 HOH A 142 442 101 HOH HOH . F 6 HOH A 143 443 165 HOH HOH . F 6 HOH A 144 444 122 HOH HOH . F 6 HOH A 145 445 157 HOH HOH . F 6 HOH A 146 446 176 HOH HOH . F 6 HOH A 147 447 141 HOH HOH . F 6 HOH A 148 448 196 HOH HOH . F 6 HOH A 149 449 86 HOH HOH . F 6 HOH A 150 450 84 HOH HOH . F 6 HOH A 151 451 152 HOH HOH . F 6 HOH A 152 452 170 HOH HOH . F 6 HOH A 153 453 78 HOH HOH . F 6 HOH A 154 454 142 HOH HOH . F 6 HOH A 155 455 153 HOH HOH . F 6 HOH A 156 456 124 HOH HOH . F 6 HOH A 157 457 210 HOH HOH . F 6 HOH A 158 458 76 HOH HOH . F 6 HOH A 159 459 52 HOH HOH . F 6 HOH A 160 460 159 HOH HOH . F 6 HOH A 161 461 148 HOH HOH . F 6 HOH A 162 462 75 HOH HOH . F 6 HOH A 163 463 96 HOH HOH . F 6 HOH A 164 464 200 HOH HOH . F 6 HOH A 165 465 169 HOH HOH . F 6 HOH A 166 466 127 HOH HOH . F 6 HOH A 167 467 77 HOH HOH . F 6 HOH A 168 468 102 HOH HOH . F 6 HOH A 169 469 120 HOH HOH . F 6 HOH A 170 470 133 HOH HOH . F 6 HOH A 171 471 204 HOH HOH . F 6 HOH A 172 472 199 HOH HOH . F 6 HOH A 173 473 158 HOH HOH . F 6 HOH A 174 474 74 HOH HOH . F 6 HOH A 175 475 123 HOH HOH . F 6 HOH A 176 476 197 HOH HOH . F 6 HOH A 177 477 179 HOH HOH . F 6 HOH A 178 478 131 HOH HOH . F 6 HOH A 179 479 135 HOH HOH . F 6 HOH A 180 480 118 HOH HOH . F 6 HOH A 181 481 154 HOH HOH . F 6 HOH A 182 482 112 HOH HOH . F 6 HOH A 183 483 167 HOH HOH . F 6 HOH A 184 484 63 HOH HOH . F 6 HOH A 185 485 166 HOH HOH . F 6 HOH A 186 486 57 HOH HOH . F 6 HOH A 187 487 150 HOH HOH . F 6 HOH A 188 488 156 HOH HOH . F 6 HOH A 189 489 134 HOH HOH . F 6 HOH A 190 490 70 HOH HOH . F 6 HOH A 191 491 81 HOH HOH . F 6 HOH A 192 492 89 HOH HOH . F 6 HOH A 193 493 208 HOH HOH . F 6 HOH A 194 494 107 HOH HOH . F 6 HOH A 195 495 121 HOH HOH . F 6 HOH A 196 496 145 HOH HOH . G 6 HOH B 1 101 211 HOH HOH . G 6 HOH B 2 102 45 HOH HOH . G 6 HOH B 3 103 40 HOH HOH . G 6 HOH B 4 104 62 HOH HOH . G 6 HOH B 5 105 173 HOH HOH . G 6 HOH B 6 106 48 HOH HOH . G 6 HOH B 7 107 80 HOH HOH . G 6 HOH B 8 108 100 HOH HOH . G 6 HOH B 9 109 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 K6R . . . C 3 28.892 -30.4 -15.632 0.62 38.66 ? C1 K6R 201 A 1 HETATM 2 C C2 K6R . . . C 3 29.423 -32.496 -14.958 0.62 34.38 ? C2 K6R 201 A 1 HETATM 3 C C3 K6R . . . C 3 29.516 -32.119 -13.631 0.62 32.75 ? C3 K6R 201 A 1 HETATM 4 C C4 K6R . . . C 3 29.276 -30.788 -13.296 0.62 30.95 ? C4 K6R 201 A 1 HETATM 5 C C5 K6R . . . C 3 29.672 -31.234 -10.912 0.62 29.52 ? C5 K6R 201 A 1 HETATM 6 C C6 K6R . . . C 3 28.74 -32.413 -10.794 0.62 29.44 ? C6 K6R 201 A 1 HETATM 7 C C7 K6R . . . C 3 29.065 -33.494 -9.989 0.62 30.33 ? C7 K6R 201 A 1 HETATM 8 C C8 K6R . . . C 3 28.208 -34.575 -9.878 0.62 30.51 ? C8 K6R 201 A 1 HETATM 9 C C9 K6R . . . C 3 27.018 -34.59 -10.57 0.62 29.93 ? C9 K6R 201 A 1 HETATM 10 C C10 K6R . . . C 3 26.684 -33.524 -11.374 0.62 28.4 ? C10 K6R 201 A 1 HETATM 11 C C11 K6R . . . C 3 27.539 -32.441 -11.485 0.62 28.43 ? C11 K6R 201 A 1 HETATM 12 C C12 K6R . . . C 3 28.745 -28.497 -14.072 0.62 23.99 ? C12 K6R 201 A 1 HETATM 13 N N1 K6R . . . C 3 29.333 -30.339 -12.003 0.62 28.91 ? N1 K6R 201 A 1 HETATM 14 N N2 K6R . . . C 3 28.573 -27.38 -13.919 0.62 22.57 ? N2 K6R 201 A 1 HETATM 15 C C K6R . . . C 3 28.956 -29.89 -14.34 0.62 29.62 ? C K6R 201 A 1 HETATM 16 N N K6R . . . C 3 29.111 -31.659 -15.958 0.62 36.08 ? N K6R 201 A 1 HETATM 17 CL CL K6R . . . C 3 28.531 -29.314 -16.935 0.62 50.42 ? CL K6R 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #