data_7ZXN # _model_server_result.job_id XiB3Nwa_gKhH34cP_BFVHg _model_server_result.datetime_utc '2025-03-21 11:47:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zxn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":501}' # _entry.id 7ZXN # _exptl.entry_id 7ZXN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZXN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZXN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 179 A CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 60 A CYS 60 1_555 A SG CYS 173 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 B SG CYS 53 B CYS 53 1_555 B SG CYS 179 B CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 B SG CYS 60 B CYS 60 1_555 B SG CYS 173 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 64 B CYS 64 1_555 B SG CYS 168 B CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf7 C SG CYS 53 C CYS 53 1_555 C SG CYS 179 C CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 C SG CYS 60 C CYS 60 1_555 C SG CYS 173 C CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf9 C SG CYS 64 C CYS 64 1_555 C SG CYS 168 C CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf10 D SG CYS 53 D CYS 53 1_555 D SG CYS 179 D CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf11 D SG CYS 60 D CYS 60 1_555 D SG CYS 173 D CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf12 D SG CYS 64 D CYS 64 1_555 D SG CYS 168 D CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf13 E SG CYS 53 E CYS 53 1_555 E SG CYS 179 E CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf14 E SG CYS 60 E CYS 60 1_555 E SG CYS 173 E CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf15 E SG CYS 64 E CYS 64 1_555 E SG CYS 168 E CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf16 F SG CYS 53 F CYS 53 1_555 F SG CYS 179 F CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf17 F SG CYS 60 F CYS 60 1_555 F SG CYS 173 F CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf18 F SG CYS 64 F CYS 64 1_555 F SG CYS 168 F CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 7ZXN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 CLR A 1 501 501 CLR CLR . H 2 CLR B 1 501 501 CLR CLR . I 2 CLR C 1 501 501 CLR CLR . J 2 CLR D 1 501 501 CLR CLR . K 2 CLR E 1 501 501 CLR CLR . L 2 CLR F 1 501 501 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . J 2 119.767 112.181 123.227 1 33.02 ? C1 CLR 501 D 1 HETATM 2 C C2 CLR . . . J 2 121.142 112.585 123.708 1 33.02 ? C2 CLR 501 D 1 HETATM 3 C C3 CLR . . . J 2 122.035 113.094 122.609 1 33.02 ? C3 CLR 501 D 1 HETATM 4 C C4 CLR . . . J 2 121.318 114.219 121.845 1 33.02 ? C4 CLR 501 D 1 HETATM 5 C C5 CLR . . . J 2 119.947 113.822 121.354 1 33.02 ? C5 CLR 501 D 1 HETATM 6 C C6 CLR . . . J 2 119.661 113.991 120.076 1 33.02 ? C6 CLR 501 D 1 HETATM 7 C C7 CLR . . . J 2 118.299 113.62 119.47 1 33.02 ? C7 CLR 501 D 1 HETATM 8 C C8 CLR . . . J 2 117.246 113.529 120.577 1 33.02 ? C8 CLR 501 D 1 HETATM 9 C C9 CLR . . . J 2 117.799 112.601 121.7 1 33.02 ? C9 CLR 501 D 1 HETATM 10 C C10 CLR . . . J 2 119.012 113.237 122.424 1 33.02 ? C10 CLR 501 D 1 HETATM 11 C C11 CLR . . . J 2 116.72 112.079 122.664 1 33.02 ? C11 CLR 501 D 1 HETATM 12 C C12 CLR . . . J 2 115.432 111.62 121.967 1 33.02 ? C12 CLR 501 D 1 HETATM 13 C C13 CLR . . . J 2 114.884 112.768 121.108 1 33.02 ? C13 CLR 501 D 1 HETATM 14 C C14 CLR . . . J 2 115.989 112.951 120.008 1 33.02 ? C14 CLR 501 D 1 HETATM 15 C C15 CLR . . . J 2 115.284 113.751 118.868 1 33.02 ? C15 CLR 501 D 1 HETATM 16 C C16 CLR . . . J 2 113.767 113.324 118.977 1 33.02 ? C16 CLR 501 D 1 HETATM 17 C C17 CLR . . . J 2 113.645 112.366 120.223 1 33.02 ? C17 CLR 501 D 1 HETATM 18 C C18 CLR . . . J 2 114.621 114.042 121.865 1 33.02 ? C18 CLR 501 D 1 HETATM 19 C C19 CLR . . . J 2 118.542 114.375 123.352 1 33.02 ? C19 CLR 501 D 1 HETATM 20 C C20 CLR . . . J 2 112.313 112.575 120.939 1 33.02 ? C20 CLR 501 D 1 HETATM 21 C C21 CLR . . . J 2 112.205 111.761 122.234 1 33.02 ? C21 CLR 501 D 1 HETATM 22 C C22 CLR . . . J 2 111.188 112.064 119.963 1 33.02 ? C22 CLR 501 D 1 HETATM 23 C C23 CLR . . . J 2 109.802 112.352 120.555 1 33.02 ? C23 CLR 501 D 1 HETATM 24 C C24 CLR . . . J 2 108.781 112.051 119.415 1 33.02 ? C24 CLR 501 D 1 HETATM 25 C C25 CLR . . . J 2 107.367 112.093 120.026 1 33.02 ? C25 CLR 501 D 1 HETATM 26 C C26 CLR . . . J 2 106.368 111.933 118.873 1 33.02 ? C26 CLR 501 D 1 HETATM 27 C C27 CLR . . . J 2 107.151 111.096 121.169 1 33.02 ? C27 CLR 501 D 1 HETATM 28 O O1 CLR . . . J 2 123.299 113.538 123.056 1 33.02 ? O1 CLR 501 D 1 HETATM 29 H H11 CLR . . . J 2 119.792 111.353 122.723 1 33.02 ? H11 CLR 501 D 1 HETATM 30 H H12 CLR . . . J 2 119.224 111.903 123.981 1 33.02 ? H12 CLR 501 D 1 HETATM 31 H H21 CLR . . . J 2 121.558 111.861 124.193 1 33.02 ? H21 CLR 501 D 1 HETATM 32 H H22 CLR . . . J 2 121.072 113.226 124.432 1 33.02 ? H22 CLR 501 D 1 HETATM 33 H H3 CLR . . . J 2 122.24 112.372 121.996 1 33.02 ? H3 CLR 501 D 1 HETATM 34 H H41 CLR . . . J 2 121.867 114.549 121.118 1 33.02 ? H41 CLR 501 D 1 HETATM 35 H H42 CLR . . . J 2 121.242 115.002 122.412 1 33.02 ? H42 CLR 501 D 1 HETATM 36 H H6 CLR . . . J 2 120.295 114.353 119.502 1 33.02 ? H6 CLR 501 D 1 HETATM 37 H H71 CLR . . . J 2 118.365 112.8 118.958 1 33.02 ? H71 CLR 501 D 1 HETATM 38 H H72 CLR . . . J 2 118.033 114.238 118.773 1 33.02 ? H72 CLR 501 D 1 HETATM 39 H H8 CLR . . . J 2 117.095 114.406 120.958 1 33.02 ? H8 CLR 501 D 1 HETATM 40 H H9 CLR . . . J 2 118.142 111.807 121.262 1 33.02 ? H9 CLR 501 D 1 HETATM 41 H H111 CLR . . . J 2 117.068 111.374 123.231 1 33.02 ? H111 CLR 501 D 1 HETATM 42 H H112 CLR . . . J 2 116.509 112.74 123.338 1 33.02 ? H112 CLR 501 D 1 HETATM 43 H H121 CLR . . . J 2 115.596 110.823 121.441 1 33.02 ? H121 CLR 501 D 1 HETATM 44 H H122 CLR . . . J 2 114.797 111.273 122.608 1 33.02 ? H122 CLR 501 D 1 HETATM 45 H H14 CLR . . . J 2 116.243 112.086 119.654 1 33.02 ? H14 CLR 501 D 1 HETATM 46 H H151 CLR . . . J 2 115.675 113.575 117.999 1 33.02 ? H151 CLR 501 D 1 HETATM 47 H H152 CLR . . . J 2 115.414 114.709 118.929 1 33.02 ? H152 CLR 501 D 1 HETATM 48 H H161 CLR . . . J 2 113.462 112.906 118.158 1 33.02 ? H161 CLR 501 D 1 HETATM 49 H H162 CLR . . . J 2 113.178 114.092 119.005 1 33.02 ? H162 CLR 501 D 1 HETATM 50 H H17 CLR . . . J 2 113.703 111.421 120.014 1 33.02 ? H17 CLR 501 D 1 HETATM 51 H H181 CLR . . . J 2 115.398 114.39 122.326 1 33.02 ? H181 CLR 501 D 1 HETATM 52 H H182 CLR . . . J 2 114.261 114.779 121.346 1 33.02 ? H182 CLR 501 D 1 HETATM 53 H H183 CLR . . . J 2 114.019 113.919 122.614 1 33.02 ? H183 CLR 501 D 1 HETATM 54 H H191 CLR . . . J 2 119.269 114.903 123.715 1 33.02 ? H191 CLR 501 D 1 HETATM 55 H H192 CLR . . . J 2 117.904 114.977 122.939 1 33.02 ? H192 CLR 501 D 1 HETATM 56 H H193 CLR . . . J 2 118.142 114.03 124.166 1 33.02 ? H193 CLR 501 D 1 HETATM 57 H H20 CLR . . . J 2 112.201 113.503 121.187 1 33.02 ? H20 CLR 501 D 1 HETATM 58 H H211 CLR . . . J 2 112.378 110.823 122.063 1 33.02 ? H211 CLR 501 D 1 HETATM 59 H H212 CLR . . . J 2 112.805 112.041 122.94 1 33.02 ? H212 CLR 501 D 1 HETATM 60 H H213 CLR . . . J 2 111.313 111.745 122.604 1 33.02 ? H213 CLR 501 D 1 HETATM 61 H H221 CLR . . . J 2 111.301 111.123 119.767 1 33.02 ? H221 CLR 501 D 1 HETATM 62 H H222 CLR . . . J 2 111.282 112.479 119.094 1 33.02 ? H222 CLR 501 D 1 HETATM 63 H H231 CLR . . . J 2 109.727 113.251 120.908 1 33.02 ? H231 CLR 501 D 1 HETATM 64 H H232 CLR . . . J 2 109.637 111.836 121.351 1 33.02 ? H232 CLR 501 D 1 HETATM 65 H H241 CLR . . . J 2 108.966 111.208 118.977 1 33.02 ? H241 CLR 501 D 1 HETATM 66 H H242 CLR . . . J 2 108.866 112.681 118.683 1 33.02 ? H242 CLR 501 D 1 HETATM 67 H H25 CLR . . . J 2 107.225 112.952 120.452 1 33.02 ? H25 CLR 501 D 1 HETATM 68 H H261 CLR . . . J 2 105.448 111.907 119.176 1 33.02 ? H261 CLR 501 D 1 HETATM 69 H H262 CLR . . . J 2 106.468 112.66 118.24 1 33.02 ? H262 CLR 501 D 1 HETATM 70 H H263 CLR . . . J 2 106.44 111.087 118.406 1 33.02 ? H263 CLR 501 D 1 HETATM 71 H H271 CLR . . . J 2 107.36 110.181 120.925 1 33.02 ? H271 CLR 501 D 1 HETATM 72 H H272 CLR . . . J 2 107.642 111.291 121.982 1 33.02 ? H272 CLR 501 D 1 HETATM 73 H H273 CLR . . . J 2 106.218 111.029 121.422 1 33.02 ? H273 CLR 501 D 1 HETATM 74 H H1 CLR . . . J 2 123.759 113.913 122.451 1 33.02 ? H1 CLR 501 D 1 # _model_server_stats.io_time_ms 169 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 61 _model_server_stats.query_time_ms 1275 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 74 #