data_7ZXY # _model_server_result.job_id SEc-Cz52tfF1LjMX8NO6vg _model_server_result.datetime_utc '2024-11-04 22:41:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zxy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":302}' # _entry.id 7ZXY # _exptl.entry_id 7ZXY _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 282.547 _entity.id 14 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZXY _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZXY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 14 Y N N ? 14 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 113 D CYS 125 1_555 D SG CYS 128 D CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A SG CYS 42 A CYS 42 1_555 T CAB HEC . A HEC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.692 ? covale ? covale2 C SG CYS 22 C CYS 22 1_555 X CAB HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.657 ? covale ? covale3 C SG CYS 25 C CYS 25 1_555 X CAC HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.75 ? covale ? covale4 I SG CYS 42 I CYS 42 1_555 GA CAB HEC . I HEC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.752 ? covale ? covale5 K SG CYS 22 K CYS 22 1_555 LA CAB HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.686 ? covale ? covale6 K SG CYS 25 K CYS 25 1_555 LA CAC HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.747 ? metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 R FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.735 ? metalc ? metalc2 A NE2 HIS 107 A HIS 107 1_555 S FE HEM . A HEM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc3 A NE2 HIS 194 A HIS 194 1_555 R FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc4 A NE2 HIS 209 A HIS 209 1_555 S FE HEM . A HEM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc5 C N TYR 1 C TYR 1 1_555 X FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc6 C NE2 HIS 26 C HIS 26 1_555 X FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc7 D SG CYS 108 D CYS 120 1_555 AA FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc8 D ND1 HIS 110 D HIS 122 1_555 AA FE1 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc9 D SG CYS 126 D CYS 138 1_555 AA FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc10 I NE2 HIS 93 I HIS 93 1_555 EA FE HEM . I HEM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc11 I NE2 HIS 107 I HIS 107 1_555 FA FE HEM . I HEM 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc12 I NE2 HIS 194 I HIS 194 1_555 EA FE HEM . I HEM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.73 ? metalc ? metalc13 I NE2 HIS 209 I HIS 209 1_555 FA FE HEM . I HEM 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc14 K N TYR 1 K TYR 1 1_555 LA FE HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc15 K NE2 HIS 26 K HIS 26 1_555 LA FE HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc16 L SG CYS 108 L CYS 120 1_555 MA FE2 FES . L FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc17 L ND1 HIS 110 L HIS 122 1_555 MA FE1 FES . L FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc18 L SG CYS 126 L CYS 138 1_555 MA FE2 FES . L FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc19 L ND1 HIS 129 L HIS 141 1_555 MA FE1 FES . L FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.759 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # _atom_sites.entry_id 7ZXY _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 9 ECH A 1 301 101 ECH ECH . R 10 HEM A 1 302 305 HEM HEM . S 10 HEM A 1 303 306 HEM HEM . T 11 HEC A 1 304 307 HEC HEM . U 12 CLA B 1 201 201 CLA CLA . V 13 PGV B 1 202 202 PGV PGV . W 13 PGV B 1 203 309 PGV PGV . X 11 HEC C 1 301 301 HEC HEC . Y 14 LFA C 1 302 102 LFA LFA . Z 13 PGV C 1 303 302 PGV PGV . AA 15 FES D 1 201 203 FES FES . BA 14 LFA E 1 101 103 LFA LFA . CA 9 ECH I 1 301 101 ECH ECH . DA 13 PGV I 1 302 308 PGV PGV . EA 10 HEM I 1 303 308 HEM HEM . FA 10 HEM I 1 304 309 HEM HEM . GA 11 HEC I 1 305 310 HEC HEM . HA 12 CLA J 1 201 201 CLA CLA . IA 13 PGV J 1 202 201 PGV PGV . JA 13 PGV J 1 203 310 PGV PGV . KA 13 PGV J 1 204 311 PGV PGV . LA 11 HEC K 1 301 301 HEC HEC . MA 15 FES L 1 201 204 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . Y 14 154.693 94.777 80.564 1 59.16 ? C1 LFA 302 C 1 HETATM 2 C C2 LFA . . . Y 14 154.408 95.501 81.857 1 59.16 ? C2 LFA 302 C 1 HETATM 3 C C3 LFA . . . Y 14 153.154 96.334 81.681 1 59.16 ? C3 LFA 302 C 1 HETATM 4 C C4 LFA . . . Y 14 152.902 97.052 82.988 1 59.16 ? C4 LFA 302 C 1 HETATM 5 C C5 LFA . . . Y 14 153.697 98.335 82.969 1 59.16 ? C5 LFA 302 C 1 HETATM 6 C C6 LFA . . . Y 14 153.458 99.014 84.298 1 59.16 ? C6 LFA 302 C 1 HETATM 7 C C7 LFA . . . Y 14 152.005 99.424 84.355 1 59.16 ? C7 LFA 302 C 1 HETATM 8 C C8 LFA . . . Y 14 151.897 100.434 85.467 1 59.16 ? C8 LFA 302 C 1 HETATM 9 C C9 LFA . . . Y 14 150.43 100.676 85.695 1 59.16 ? C9 LFA 302 C 1 HETATM 10 C C10 LFA . . . Y 14 150.359 101.738 86.758 1 59.16 ? C10 LFA 302 C 1 HETATM 11 C C11 LFA . . . Y 14 149.021 101.596 87.434 1 59.16 ? C11 LFA 302 C 1 HETATM 12 C C12 LFA . . . Y 14 149.172 102.229 88.795 1 59.16 ? C12 LFA 302 C 1 HETATM 13 C C13 LFA . . . Y 14 149.819 101.193 89.677 1 59.16 ? C13 LFA 302 C 1 HETATM 14 C C14 LFA . . . Y 14 151.037 101.841 90.286 1 59.16 ? C14 LFA 302 C 1 HETATM 15 C C15 LFA . . . Y 14 151.859 100.729 90.886 1 59.16 ? C15 LFA 302 C 1 HETATM 16 C C16 LFA . . . Y 14 151.414 100.555 92.315 1 59.16 ? C16 LFA 302 C 1 HETATM 17 C C17 LFA . . . Y 14 152.25 99.44 92.894 1 59.16 ? C17 LFA 302 C 1 HETATM 18 C C18 LFA . . . Y 14 151.911 99.322 94.359 1 59.16 ? C18 LFA 302 C 1 HETATM 19 C C19 LFA . . . Y 14 152.748 100.348 95.095 1 59.16 ? C19 LFA 302 C 1 HETATM 20 C C20 LFA . . . Y 14 154.192 99.908 95.057 1 59.16 ? C20 LFA 302 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #