data_7ZY3 # _model_server_result.job_id 7IA05MIlAJ7p8CFvRUn9EA _model_server_result.datetime_utc '2025-07-14 17:19:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zy3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 7ZY3 # _exptl.entry_id 7ZY3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZY3 _cell.length_a 46.2 _cell.length_b 48.3 _cell.length_c 104.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZY3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PCA 1 A PCA 7 1_555 A N ALA 2 A ALA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.289 ? covale ? covale2 A NZ LYS 220 A LYS 226 1_555 B C15 RET . A RET 300 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.22 ? covale ? covale3 A NZ LYS 220 A LYS 226 1_555 B C15 RET . A RET 300 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.226 ? metalc ? metalc1 A OD2 ASP 5 A ASP 11 1_555 G CA CA . A CA 713 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc2 A OD1 ASP 5 A ASP 11 1_555 H NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc3 A OD1 ASP 9 A ASP 15 1_555 H NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc4 A O ARG 11 A ARG 17 1_555 H NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.187 ? metalc ? metalc5 A OG1 THR 14 A THR 20 1_555 H NA NA . A NA 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc6 A OD1 ASP 40 A ASP 46 1_555 G CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc7 A OD2 ASP 40 A ASP 46 1_555 G CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc8 A OD2 ASP 42 A ASP 48 1_555 G CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc9 A O LEU 234 A LEU 240 1_555 G CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc10 A OD1 ASP 236 A ASP 242 1_555 I MG MG . A MG 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc11 A O THR 237 A THR 243 1_555 I MG MG . A MG 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc12 M O HOH . A HOH 545 2_554 I MG MG . A MG 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc13 M O HOH . A HOH 547 1_555 I MG MG . A MG 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc14 M O HOH . A HOH 586 1_555 G CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc15 M O HOH . A HOH 589 2_554 G CA CA . A CA 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc16 M O HOH . A HOH 664 1_555 I MG MG . A MG 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc17 M O HOH . A HOH 666 1_555 I MG MG . A MG 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 285 n n C1 O2 PLM doub 286 n n C1 C2 PLM sing 287 n n O1 H PLM sing 288 n n C2 C3 PLM sing 289 n n C2 H21 PLM sing 290 n n C2 H22 PLM sing 291 n n C3 C4 PLM sing 292 n n C3 H31 PLM sing 293 n n C3 H32 PLM sing 294 n n C4 C5 PLM sing 295 n n C4 H41 PLM sing 296 n n C4 H42 PLM sing 297 n n C5 C6 PLM sing 298 n n C5 H51 PLM sing 299 n n C5 H52 PLM sing 300 n n C6 C7 PLM sing 301 n n C6 H61 PLM sing 302 n n C6 H62 PLM sing 303 n n C7 C8 PLM sing 304 n n C7 H71 PLM sing 305 n n C7 H72 PLM sing 306 n n C8 C9 PLM sing 307 n n C8 H81 PLM sing 308 n n C8 H82 PLM sing 309 n n C9 CA PLM sing 310 n n C9 H91 PLM sing 311 n n C9 H92 PLM sing 312 n n CA CB PLM sing 313 n n CA HA1 PLM sing 314 n n CA HA2 PLM sing 315 n n CB CC PLM sing 316 n n CB HB1 PLM sing 317 n n CB HB2 PLM sing 318 n n CC CD PLM sing 319 n n CC HC1 PLM sing 320 n n CC HC2 PLM sing 321 n n CD CE PLM sing 322 n n CD HD1 PLM sing 323 n n CD HD2 PLM sing 324 n n CE CF PLM sing 325 n n CE HE1 PLM sing 326 n n CE HE2 PLM sing 327 n n CF CG PLM sing 328 n n CF HF1 PLM sing 329 n n CF HF2 PLM sing 330 n n CG HG1 PLM sing 331 n n CG HG2 PLM sing 332 n n CG HG3 PLM sing 333 n n # _atom_sites.entry_id 7ZY3 _atom_sites.fract_transf_matrix[1][1] 0.021645 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020704 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 300 300 RET RET . C 3 DD9 A 1 301 301 DD9 DD9 . D 4 R16 A 1 302 302 R16 R16 . E 5 PLM A 1 303 303 PLM PLM . F 5 PLM A 1 304 304 PLM PLM . G 6 CA A 1 713 713 CA CA . H 7 NA A 1 714 714 NA NA . I 8 MG A 1 715 715 MG MG . J 9 CL A 1 716 716 CL CL . K 9 CL A 1 718 715 CL CL . L 9 CL A 1 717 717 CL CL . M 10 HOH A 1 661 661 HOH HOH . M 10 HOH A 2 644 644 HOH HOH . M 10 HOH A 3 402 402 HOH HOH . M 10 HOH A 4 665 665 HOH HOH . M 10 HOH A 5 664 664 HOH HOH . M 10 HOH A 6 561 561 HOH HOH . M 10 HOH A 7 558 558 HOH HOH . M 10 HOH A 8 595 595 HOH HOH . M 10 HOH A 9 592 592 HOH HOH . M 10 HOH A 10 547 547 HOH HOH . M 10 HOH A 11 601 601 HOH HOH . M 10 HOH A 12 528 528 HOH HOH . M 10 HOH A 13 512 512 HOH HOH . M 10 HOH A 14 525 525 HOH HOH . M 10 HOH A 15 406 406 HOH HOH . M 10 HOH A 16 575 575 HOH HOH . M 10 HOH A 17 630 630 HOH HOH . M 10 HOH A 18 545 545 HOH HOH . M 10 HOH A 19 594 594 HOH HOH . M 10 HOH A 20 622 622 HOH HOH . M 10 HOH A 21 587 587 HOH HOH . M 10 HOH A 22 603 603 HOH HOH . M 10 HOH A 23 407 407 HOH HOH . M 10 HOH A 24 539 539 HOH HOH . M 10 HOH A 25 646 646 HOH HOH . M 10 HOH A 26 604 604 HOH HOH . M 10 HOH A 27 596 596 HOH HOH . M 10 HOH A 28 401 401 HOH HOH . M 10 HOH A 29 588 588 HOH HOH . M 10 HOH A 30 501 501 HOH HOH . M 10 HOH A 31 543 543 HOH HOH . M 10 HOH A 32 593 593 HOH HOH . M 10 HOH A 33 591 591 HOH HOH . M 10 HOH A 34 635 635 HOH HOH . M 10 HOH A 35 645 645 HOH HOH . M 10 HOH A 36 600 600 HOH HOH . M 10 HOH A 37 628 628 HOH HOH . M 10 HOH A 38 602 602 HOH HOH . M 10 HOH A 39 531 531 HOH HOH . M 10 HOH A 40 625 625 HOH HOH . M 10 HOH A 41 589 589 HOH HOH . M 10 HOH A 42 666 666 HOH HOH . M 10 HOH A 43 590 590 HOH HOH . M 10 HOH A 44 598 598 HOH HOH . M 10 HOH A 45 641 641 HOH HOH . M 10 HOH A 46 586 586 HOH HOH . M 10 HOH A 47 649 649 HOH HOH . M 10 HOH A 48 627 627 HOH HOH . M 10 HOH A 49 520 520 HOH HOH . M 10 HOH A 50 599 599 HOH HOH . M 10 HOH A 51 513 513 HOH HOH . M 10 HOH A 52 636 636 HOH HOH . M 10 HOH A 53 534 534 HOH HOH . M 10 HOH A 54 522 522 HOH HOH . M 10 HOH A 55 404 404 HOH HOH . M 10 HOH A 56 633 633 HOH HOH . M 10 HOH A 57 583 583 HOH HOH . M 10 HOH A 58 576 576 HOH HOH . M 10 HOH A 59 660 660 HOH HOH . M 10 HOH A 60 541 541 HOH HOH . M 10 HOH A 61 639 639 HOH HOH . M 10 HOH A 62 566 566 HOH HOH . M 10 HOH A 63 629 629 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . E 5 -13.118 -10.271 -40.409 1 70.68 ? C1 PLM 303 A 1 HETATM 2 O O1 PLM . . . E 5 -14.052 -9.91 -41.174 1 90.78 ? O1 PLM 303 A 1 HETATM 3 O O2 PLM . . . E 5 -12.382 -11.244 -40.717 1 87.24 ? O2 PLM 303 A 1 HETATM 4 C C2 PLM . . . E 5 -12.849 -9.517 -39.12 1 75.05 ? C2 PLM 303 A 1 HETATM 5 C C3 PLM . . . E 5 -14.111 -8.815 -38.645 1 65.06 ? C3 PLM 303 A 1 HETATM 6 C C4 PLM . . . E 5 -13.765 -7.875 -37.492 1 63.68 ? C4 PLM 303 A 1 HETATM 7 C C5 PLM . . . E 5 -12.918 -8.579 -36.443 1 73.91 ? C5 PLM 303 A 1 HETATM 8 C C6 PLM . . . E 5 -13.076 -7.868 -35.099 1 63.92 ? C6 PLM 303 A 1 HETATM 9 C C7 PLM . . . E 5 -11.935 -8.272 -34.181 1 55.68 ? C7 PLM 303 A 1 HETATM 10 C C8 PLM . . . E 5 -12.056 -9.7 -33.653 1 78.17 ? C8 PLM 303 A 1 HETATM 11 C C9 PLM . . . E 5 -10.665 -10.278 -33.316 1 50.43 ? C9 PLM 303 A 1 HETATM 12 C CA PLM . . . E 5 -10.796 -11.516 -32.445 1 64.39 ? CA PLM 303 A 1 HETATM 13 C CB PLM . . . E 5 -9.415 -12.099 -32.145 1 41.11 ? CB PLM 303 A 1 HETATM 14 C CC PLM . . . E 5 -9.391 -12.788 -30.781 1 52.8 ? CC PLM 303 A 1 HETATM 15 C CD PLM . . . E 5 -7.947 -13.139 -30.397 1 43 ? CD PLM 303 A 1 HETATM 16 C CE PLM . . . E 5 -7.83 -13.641 -28.956 1 46.92 ? CE PLM 303 A 1 HETATM 17 C CF PLM . . . E 5 -6.368 -13.899 -28.659 1 54.27 ? CF PLM 303 A 1 HETATM 18 C CG PLM . . . E 5 -6.139 -14.277 -27.185 1 54.49 ? CG PLM 303 A 1 HETATM 19 H H21 PLM . . . E 5 -12.155 -8.857 -39.274 1 90.07 ? H21 PLM 303 A 1 HETATM 20 H H22 PLM . . . E 5 -12.556 -10.142 -38.439 1 90.07 ? H22 PLM 303 A 1 HETATM 21 H H31 PLM . . . E 5 -14.755 -9.475 -38.342 1 78.08 ? H31 PLM 303 A 1 HETATM 22 H H32 PLM . . . E 5 -14.492 -8.304 -39.376 1 78.08 ? H32 PLM 303 A 1 HETATM 23 H H41 PLM . . . E 5 -14.586 -7.564 -37.08 1 76.42 ? H41 PLM 303 A 1 HETATM 24 H H42 PLM . . . E 5 -13.271 -7.117 -37.84 1 76.42 ? H42 PLM 303 A 1 HETATM 25 H H51 PLM . . . E 5 -13.209 -9.5 -36.358 1 88.7 ? H51 PLM 303 A 1 HETATM 26 H H52 PLM . . . E 5 -11.987 -8.558 -36.712 1 88.7 ? H52 PLM 303 A 1 HETATM 27 H H61 PLM . . . E 5 -13.922 -8.122 -34.696 1 76.71 ? H61 PLM 303 A 1 HETATM 28 H H62 PLM . . . E 5 -13.059 -6.908 -35.236 1 76.71 ? H62 PLM 303 A 1 HETATM 29 H H71 PLM . . . E 5 -11.92 -7.664 -33.425 1 66.83 ? H71 PLM 303 A 1 HETATM 30 H H72 PLM . . . E 5 -11.103 -8.195 -34.674 1 66.83 ? H72 PLM 303 A 1 HETATM 31 H H81 PLM . . . E 5 -12.476 -10.254 -34.329 1 93.82 ? H81 PLM 303 A 1 HETATM 32 H H82 PLM . . . E 5 -12.602 -9.697 -32.852 1 93.82 ? H82 PLM 303 A 1 HETATM 33 H H91 PLM . . . E 5 -10.21 -10.515 -34.139 1 60.53 ? H91 PLM 303 A 1 HETATM 34 H H92 PLM . . . E 5 -10.147 -9.609 -32.842 1 60.53 ? H92 PLM 303 A 1 HETATM 35 H HA1 PLM . . . E 5 -11.33 -12.18 -32.909 1 77.27 ? HA1 PLM 303 A 1 HETATM 36 H HA2 PLM . . . E 5 -11.231 -11.277 -31.611 1 77.27 ? HA2 PLM 303 A 1 HETATM 37 H HB1 PLM . . . E 5 -8.762 -11.382 -32.15 1 49.33 ? HB1 PLM 303 A 1 HETATM 38 H HB2 PLM . . . E 5 -9.189 -12.746 -32.832 1 49.33 ? HB2 PLM 303 A 1 HETATM 39 H HC1 PLM . . . E 5 -9.919 -13.601 -30.822 1 63.36 ? HC1 PLM 303 A 1 HETATM 40 H HC2 PLM . . . E 5 -9.765 -12.193 -30.113 1 63.36 ? HC2 PLM 303 A 1 HETATM 41 H HD1 PLM . . . E 5 -7.397 -12.346 -30.496 1 51.61 ? HD1 PLM 303 A 1 HETATM 42 H HD2 PLM . . . E 5 -7.626 -13.832 -30.995 1 51.61 ? HD2 PLM 303 A 1 HETATM 43 H HE1 PLM . . . E 5 -8.336 -14.462 -28.852 1 56.31 ? HE1 PLM 303 A 1 HETATM 44 H HE2 PLM . . . E 5 -8.174 -12.97 -28.346 1 56.31 ? HE2 PLM 303 A 1 HETATM 45 H HF1 PLM . . . E 5 -5.861 -13.097 -28.86 1 65.13 ? HF1 PLM 303 A 1 HETATM 46 H HF2 PLM . . . E 5 -6.059 -14.627 -29.221 1 65.13 ? HF2 PLM 303 A 1 HETATM 47 H HG1 PLM . . . E 5 -5.207 -14.515 -27.054 1 65.39 ? HG1 PLM 303 A 1 HETATM 48 H HG2 PLM . . . E 5 -6.701 -15.032 -26.954 1 65.39 ? HG2 PLM 303 A 1 HETATM 49 H HG3 PLM . . . E 5 -6.362 -13.521 -26.619 1 65.39 ? HG3 PLM 303 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 49 #