data_7ZYV # _model_server_result.job_id E80a1Zej10Yk1ybWBEbDDg _model_server_result.datetime_utc '2024-11-23 04:02:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7zyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"GA","auth_seq_id":101}' # _entry.id 7ZYV # _exptl.entry_id 7ZYV _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 536.873 _entity.id 17 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-CAROTENE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ZYV _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octadecameric _pdbx_struct_assembly.oligomeric_count 18 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 17 GA N N ? 17 WA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 163 D CYS 112 1_555 D SG CYS 178 D CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 L SG CYS 163 L CYS 112 1_555 L SG CYS 178 L CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A SG CYS 35 A CYS 35 1_555 U CAB HEC . A HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale2 Z C52 PL9 . B PL9 401 1_555 TA C35 PL9 . K PL9 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.491 ? covale ? covale3 C SG CYS 59 C CYS 24 1_555 DA CBC HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale4 I SG CYS 35 I CYS 35 1_555 KA CAB HEC . I HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale5 K SG CYS 59 K CYS 24 1_555 SA CBC HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 S FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc2 A NE2 HIS 100 A HIS 100 1_555 T FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc3 A NE2 HIS 187 A HIS 187 1_555 S FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc4 A NE2 HIS 202 A HIS 202 1_555 T FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc5 C N TYR 36 C TYR 1 1_555 DA FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc6 C NE2 HIS 60 C HIS 25 1_555 DA FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc7 D SG CYS 158 D CYS 107 1_555 FA FE1 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc8 D ND1 HIS 160 D HIS 109 1_555 FA FE2 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc9 D SG CYS 176 D CYS 125 1_555 FA FE1 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc10 D ND1 HIS 179 D HIS 128 1_555 FA FE2 FES . D FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc11 I NE2 HIS 86 I HIS 86 1_555 IA FE HEM . I HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc12 I NE2 HIS 100 I HIS 100 1_555 JA FE HEM . I HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc13 I NE2 HIS 187 I HIS 187 1_555 IA FE HEM . I HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc14 I NE2 HIS 202 I HIS 202 1_555 JA FE HEM . I HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? metalc ? metalc15 K N TYR 36 K TYR 1 1_555 SA FE HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc16 K NE2 HIS 60 K HIS 25 1_555 SA FE HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc17 L SG CYS 158 L CYS 107 1_555 VA FE1 FES . L FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc18 L ND1 HIS 160 L HIS 109 1_555 VA FE2 FES . L FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc19 L SG CYS 176 L CYS 125 1_555 VA FE1 FES . L FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc20 L ND1 HIS 179 L HIS 128 1_555 VA FE2 FES . L FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? # _chem_comp.formula 'C40 H56' _chem_comp.formula_weight 536.873 _chem_comp.id BCR _chem_comp.mon_nstd_flag . _chem_comp.name BETA-CAROTENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7ZYV _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 10 HEM A 1 301 301 HEM HEM . T 10 HEM A 1 302 302 HEM HEM . U 11 HEC A 1 303 303 HEC HEC . V 12 CLA A 1 304 304 CLA CLA . W 13 UMQ A 1 305 1801 UMQ UMQ . X 13 UMQ A 1 306 1901 UMQ UMQ . Y 14 PL9 A 1 307 401 PL9 PL9 . Z 14 PL9 B 1 401 401 PL9 PL9 . AA 14 PL9 B 1 402 301 PL9 PL9 . BA 13 UMQ B 1 403 601 UMQ UMQ . CA 13 UMQ B 1 404 701 UMQ UMQ . DA 11 HEC C 1 301 301 HEC HEC . EA 15 SQD D 1 201 201 SQD SQD . FA 16 FES D 1 202 201 FES FES . GA 17 BCR F 1 101 101 BCR BCR . HA 13 UMQ H 1 201 201 UMQ UMQ . IA 10 HEM I 1 301 301 HEM HEM . JA 10 HEM I 1 302 302 HEM HEM . KA 11 HEC I 1 303 303 HEC HEC . LA 12 CLA I 1 304 304 CLA CLA . MA 13 UMQ I 1 305 901 UMQ UMQ . NA 13 UMQ I 1 306 1001 UMQ UMQ . OA 14 PL9 J 1 401 401 PL9 PL9 . PA 14 PL9 J 1 402 201 PL9 PL9 . QA 13 UMQ J 1 403 601 UMQ UMQ . RA 13 UMQ J 1 404 701 UMQ UMQ . SA 11 HEC K 1 301 301 HEC HEC . TA 14 PL9 K 1 302 301 PL9 PL9 . UA 15 SQD L 1 401 401 SQD SQD . VA 16 FES L 1 402 201 FES FES . WA 17 BCR P 1 101 305 BCR BCR . XA 13 UMQ P 1 102 101 UMQ UMQ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BCR . . . GA 17 186.49 170.143 163.161 1 68.49 ? C1 BCR 101 F 1 HETATM 2 C C2 BCR . . . GA 17 185.52 171.162 163.718 1 68.49 ? C2 BCR 101 F 1 HETATM 3 C C3 BCR . . . GA 17 185.985 171.679 165.049 1 68.49 ? C3 BCR 101 F 1 HETATM 4 C C4 BCR . . . GA 17 186.186 170.567 166.049 1 68.49 ? C4 BCR 101 F 1 HETATM 5 C C5 BCR . . . GA 17 186.723 169.323 165.453 1 68.49 ? C5 BCR 101 F 1 HETATM 6 C C6 BCR . . . GA 17 186.876 169.109 164.152 1 68.49 ? C6 BCR 101 F 1 HETATM 7 C C7 BCR . . . GA 17 187.412 167.857 163.627 1 68.49 ? C7 BCR 101 F 1 HETATM 8 C C8 BCR . . . GA 17 188.66 167.463 163.877 1 68.49 ? C8 BCR 101 F 1 HETATM 9 C C9 BCR . . . GA 17 189.212 166.222 163.369 1 68.49 ? C9 BCR 101 F 1 HETATM 10 C C10 BCR . . . GA 17 190.327 165.704 163.902 1 68.49 ? C10 BCR 101 F 1 HETATM 11 C C11 BCR . . . GA 17 191.051 166.221 165.037 1 68.49 ? C11 BCR 101 F 1 HETATM 12 C C33 BCR . . . GA 17 187.098 168.304 166.45 1 68.49 ? C33 BCR 101 F 1 HETATM 13 C C31 BCR . . . GA 17 185.843 169.518 161.944 1 68.49 ? C31 BCR 101 F 1 HETATM 14 C C32 BCR . . . GA 17 187.724 170.899 162.719 1 68.49 ? C32 BCR 101 F 1 HETATM 15 C C34 BCR . . . GA 17 188.531 165.577 162.231 1 68.49 ? C34 BCR 101 F 1 HETATM 16 C C12 BCR . . . GA 17 192.182 165.604 165.392 1 68.49 ? C12 BCR 101 F 1 HETATM 17 C C13 BCR . . . GA 17 193.059 166.002 166.469 1 68.49 ? C13 BCR 101 F 1 HETATM 18 C C14 BCR . . . GA 17 194.222 165.356 166.63 1 68.49 ? C14 BCR 101 F 1 HETATM 19 C C15 BCR . . . GA 17 195.195 165.687 167.638 1 68.49 ? C15 BCR 101 F 1 HETATM 20 C C16 BCR . . . GA 17 196.356 165.023 167.718 1 68.49 ? C16 BCR 101 F 1 HETATM 21 C C17 BCR . . . GA 17 197.279 165.394 168.758 1 68.49 ? C17 BCR 101 F 1 HETATM 22 C C18 BCR . . . GA 17 198.48 164.854 168.996 1 68.49 ? C18 BCR 101 F 1 HETATM 23 C C19 BCR . . . GA 17 199.284 165.401 170.071 1 68.49 ? C19 BCR 101 F 1 HETATM 24 C C20 BCR . . . GA 17 200.475 164.91 170.416 1 68.49 ? C20 BCR 101 F 1 HETATM 25 C C21 BCR . . . GA 17 201.219 165.572 171.461 1 68.49 ? C21 BCR 101 F 1 HETATM 26 C C22 BCR . . . GA 17 202.398 165.18 171.959 1 68.49 ? C22 BCR 101 F 1 HETATM 27 C C23 BCR . . . GA 17 202.955 165.906 173.092 1 68.49 ? C23 BCR 101 F 1 HETATM 28 C C24 BCR . . . GA 17 204.107 165.574 173.673 1 68.49 ? C24 BCR 101 F 1 HETATM 29 C C25 BCR . . . GA 17 204.676 166.262 174.824 1 68.49 ? C25 BCR 101 F 1 HETATM 30 C C26 BCR . . . GA 17 204.414 165.862 176.07 1 68.49 ? C26 BCR 101 F 1 HETATM 31 C C27 BCR . . . GA 17 204.929 166.475 177.315 1 68.49 ? C27 BCR 101 F 1 HETATM 32 C C28 BCR . . . GA 17 206.045 167.455 177.051 1 68.49 ? C28 BCR 101 F 1 HETATM 33 C C29 BCR . . . GA 17 205.728 168.268 175.823 1 68.49 ? C29 BCR 101 F 1 HETATM 34 C C30 BCR . . . GA 17 205.569 167.425 174.571 1 68.49 ? C30 BCR 101 F 1 HETATM 35 C C35 BCR . . . GA 17 192.67 167.095 167.38 1 68.49 ? C35 BCR 101 F 1 HETATM 36 C C36 BCR . . . GA 17 199.063 163.815 168.13 1 68.49 ? C36 BCR 101 F 1 HETATM 37 C C37 BCR . . . GA 17 203.218 164.157 171.279 1 68.49 ? C37 BCR 101 F 1 HETATM 38 C C38 BCR . . . GA 17 203.535 164.713 176.353 1 68.49 ? C38 BCR 101 F 1 HETATM 39 C C39 BCR . . . GA 17 205.073 168.251 173.398 1 68.49 ? C39 BCR 101 F 1 HETATM 40 C C40 BCR . . . GA 17 206.979 166.972 174.211 1 68.49 ? C40 BCR 101 F 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 40 #