data_821P # _model_server_result.job_id zKda5gNNQFM6kBxobGMLDg _model_server_result.datetime_utc '2024-11-30 10:57:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 821p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":168}' # _entry.id 821P # _exptl.entry_id 821P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 821P _cell.length_a 40.2 _cell.length_b 40.2 _cell.length_c 160.1 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 821P _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc2 A OG1 THR 35 A THR 35 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc3 C O2G GNP . A GNP 167 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc4 C O2B GNP . A GNP 167 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc5 B MG MG . A MG 168 1_555 D O HOH . A HOH 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc6 B MG MG . A MG 168 1_555 D O HOH . A HOH 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 821P _atom_sites.fract_transf_matrix[1][1] 0.024876 _atom_sites.fract_transf_matrix[1][2] 0.014362 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006246 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 168 168 MG MG . C 3 GNP A 1 167 167 GNP GTN . D 4 HOH A 1 169 169 HOH HOH . D 4 HOH A 2 170 170 HOH HOH . D 4 HOH A 3 171 171 HOH HOH . D 4 HOH A 4 172 172 HOH HOH . D 4 HOH A 5 173 173 HOH HOH . D 4 HOH A 6 174 174 HOH HOH . D 4 HOH A 7 175 175 HOH HOH . D 4 HOH A 8 176 176 HOH HOH . D 4 HOH A 9 177 177 HOH HOH . D 4 HOH A 10 178 178 HOH HOH . D 4 HOH A 11 179 179 HOH HOH . D 4 HOH A 12 180 180 HOH HOH . D 4 HOH A 13 181 181 HOH HOH . D 4 HOH A 14 184 184 HOH HOH . D 4 HOH A 15 185 185 HOH HOH . D 4 HOH A 16 186 186 HOH HOH . D 4 HOH A 17 187 187 HOH HOH . D 4 HOH A 18 193 193 HOH HOH . D 4 HOH A 19 195 195 HOH HOH . D 4 HOH A 20 196 196 HOH HOH . D 4 HOH A 21 198 198 HOH HOH . D 4 HOH A 22 201 201 HOH HOH . D 4 HOH A 23 202 202 HOH HOH . D 4 HOH A 24 204 204 HOH HOH . D 4 HOH A 25 205 205 HOH HOH . D 4 HOH A 26 210 210 HOH HOH . D 4 HOH A 27 213 213 HOH HOH . D 4 HOH A 28 214 214 HOH HOH . D 4 HOH A 29 215 215 HOH HOH . D 4 HOH A 30 217 217 HOH HOH . D 4 HOH A 31 219 219 HOH HOH . D 4 HOH A 32 220 220 HOH HOH . D 4 HOH A 33 222 222 HOH HOH . D 4 HOH A 34 228 228 HOH HOH . D 4 HOH A 35 230 230 HOH HOH . D 4 HOH A 36 231 231 HOH HOH . D 4 HOH A 37 232 232 HOH HOH . D 4 HOH A 38 233 233 HOH HOH . D 4 HOH A 39 235 235 HOH HOH . D 4 HOH A 40 236 236 HOH HOH . D 4 HOH A 41 237 237 HOH HOH . D 4 HOH A 42 238 238 HOH HOH . D 4 HOH A 43 241 241 HOH HOH . D 4 HOH A 44 246 246 HOH HOH . D 4 HOH A 45 247 247 HOH HOH . D 4 HOH A 46 248 248 HOH HOH . D 4 HOH A 47 252 252 HOH HOH . D 4 HOH A 48 253 253 HOH HOH . D 4 HOH A 49 256 256 HOH HOH . D 4 HOH A 50 257 257 HOH HOH . D 4 HOH A 51 258 258 HOH HOH . D 4 HOH A 52 259 259 HOH HOH . D 4 HOH A 53 262 262 HOH HOH . D 4 HOH A 54 263 263 HOH HOH . D 4 HOH A 55 264 264 HOH HOH . D 4 HOH A 56 265 265 HOH HOH . D 4 HOH A 57 266 266 HOH HOH . D 4 HOH A 58 267 267 HOH HOH . D 4 HOH A 59 268 268 HOH HOH . D 4 HOH A 60 273 273 HOH HOH . D 4 HOH A 61 276 276 HOH HOH . D 4 HOH A 62 277 277 HOH HOH . D 4 HOH A 63 281 281 HOH HOH . D 4 HOH A 64 282 282 HOH HOH . D 4 HOH A 65 284 284 HOH HOH . D 4 HOH A 66 289 289 HOH HOH . D 4 HOH A 67 290 290 HOH HOH . D 4 HOH A 68 291 291 HOH HOH . D 4 HOH A 69 292 292 HOH HOH . D 4 HOH A 70 298 298 HOH HOH . D 4 HOH A 71 300 300 HOH HOH . D 4 HOH A 72 305 305 HOH HOH . D 4 HOH A 73 309 309 HOH HOH . D 4 HOH A 74 313 313 HOH HOH . D 4 HOH A 75 316 316 HOH HOH . D 4 HOH A 76 319 319 HOH HOH . D 4 HOH A 77 320 320 HOH HOH . D 4 HOH A 78 325 325 HOH HOH . D 4 HOH A 79 335 335 HOH HOH . D 4 HOH A 80 337 337 HOH HOH . D 4 HOH A 81 338 338 HOH HOH . D 4 HOH A 82 343 343 HOH HOH . D 4 HOH A 83 348 348 HOH HOH . D 4 HOH A 84 350 350 HOH HOH . D 4 HOH A 85 354 354 HOH HOH . D 4 HOH A 86 358 358 HOH HOH . D 4 HOH A 87 366 366 HOH HOH . D 4 HOH A 88 367 367 HOH HOH . D 4 HOH A 89 378 378 HOH HOH . D 4 HOH A 90 381 381 HOH HOH . D 4 HOH A 91 383 383 HOH HOH . D 4 HOH A 92 385 385 HOH HOH . D 4 HOH A 93 389 389 HOH HOH . D 4 HOH A 94 391 391 HOH HOH . D 4 HOH A 95 394 394 HOH HOH . D 4 HOH A 96 395 395 HOH HOH . D 4 HOH A 97 397 397 HOH HOH . D 4 HOH A 98 398 398 HOH HOH . D 4 HOH A 99 406 406 HOH HOH . D 4 HOH A 100 409 409 HOH HOH . D 4 HOH A 101 410 410 HOH HOH . D 4 HOH A 102 411 411 HOH HOH . D 4 HOH A 103 413 413 HOH HOH . D 4 HOH A 104 414 414 HOH HOH . D 4 HOH A 105 416 416 HOH HOH . D 4 HOH A 106 417 417 HOH HOH . D 4 HOH A 107 418 418 HOH HOH . D 4 HOH A 108 420 420 HOH HOH . D 4 HOH A 109 423 423 HOH HOH . D 4 HOH A 110 424 424 HOH HOH . D 4 HOH A 111 425 425 HOH HOH . D 4 HOH A 112 426 426 HOH HOH . D 4 HOH A 113 430 430 HOH HOH . D 4 HOH A 114 432 432 HOH HOH . D 4 HOH A 115 434 434 HOH HOH . D 4 HOH A 116 438 438 HOH HOH . D 4 HOH A 117 439 439 HOH HOH . D 4 HOH A 118 447 447 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.681 _atom_site.Cartn_y 33.68 _atom_site.Cartn_z 19.112 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 168 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #