data_8A0E
#
_model_server_result.job_id            jV5pi3-WvrYxfJktV_dyWQ 
_model_server_result.datetime_utc      '2024-10-12 04:34:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8a0e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":401}' 
#
_entry.id    8A0E 
#
_exptl.entry_id    8A0E 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8A0E 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8A0E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 H N N 
? 4 J N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 24 E CYS 22 1_555 E SG CYS 75 E CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
covale ? covale1 C C TYR 178 C TYR 176 1_555 C N CSS 179 C CSS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 C C CSS 179 C CSS 177 1_555 C N LYS 180 C LYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 D C TYR 178 D TYR 176 1_555 D N CSS 179 D CSS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale4 D C CSS 179 D CSS 177 1_555 D N LYS 180 D LYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8A0E 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 4 NAD A 1 401 401 NAD NAD . 
G 5 SPD A 1 402 501 SPD SPD . 
H 4 NAD B 1 401 401 NAD NAD . 
I 5 SPD B 1 402 402 SPD SPD . 
J 4 NAD C 1 401 401 NAD NAD . 
K 5 SPD D 1 401 402 SPD SPD . 
L 4 NAD D 1 402 401 NAD NAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . J 4 112.182 113.592 126.452 0.88 36.6 ? PA NAD 401 C 1 
HETATM 2 O O1A NAD . . . J 4 113.488 114.177 126.028 0.88 36.6 ? O1A NAD 401 C 1 
HETATM 3 O O2A NAD . . . J 4 112.133 112.134 126.765 0.88 36.6 ? O2A NAD 401 C 1 
HETATM 4 O O5B NAD . . . J 4 111.058 113.938 125.364 0.88 36.6 ? O5B NAD 401 C 1 
HETATM 5 C C5B NAD . . . J 4 109.728 113.4 125.574 0.88 36.6 ? C5B NAD 401 C 1 
HETATM 6 C C4B NAD . . . J 4 108.849 113.751 124.399 0.88 36.6 ? C4B NAD 401 C 1 
HETATM 7 O O4B NAD . . . J 4 108.678 115.186 124.315 0.88 36.6 ? O4B NAD 401 C 1 
HETATM 8 C C3B NAD . . . J 4 109.371 113.401 123.004 0.88 36.6 ? C3B NAD 401 C 1 
HETATM 9 O O3B NAD . . . J 4 109.304 112.01 122.717 0.88 36.6 ? O3B NAD 401 C 1 
HETATM 10 C C2B NAD . . . J 4 108.428 114.252 122.15 0.88 36.6 ? C2B NAD 401 C 1 
HETATM 11 O O2B NAD . . . J 4 107.155 113.651 122.066 0.88 36.6 ? O2B NAD 401 C 1 
HETATM 12 C C1B NAD . . . J 4 108.338 115.528 122.987 0.88 36.6 ? C1B NAD 401 C 1 
HETATM 13 N N9A NAD . . . J 4 109.219 116.597 122.536 0.88 36.6 ? N9A NAD 401 C 1 
HETATM 14 C C8A NAD . . . J 4 110.544 116.762 122.851 0.88 36.6 ? C8A NAD 401 C 1 
HETATM 15 N N7A NAD . . . J 4 111.081 117.82 122.299 0.88 36.6 ? N7A NAD 401 C 1 
HETATM 16 C C5A NAD . . . J 4 110.046 118.395 121.577 0.88 36.6 ? C5A NAD 401 C 1 
HETATM 17 C C6A NAD . . . J 4 109.978 119.547 120.771 0.88 36.6 ? C6A NAD 401 C 1 
HETATM 18 N N6A NAD . . . J 4 111.009 120.357 120.548 0.88 36.6 ? N6A NAD 401 C 1 
HETATM 19 N N1A NAD . . . J 4 108.788 119.837 120.195 0.88 36.6 ? N1A NAD 401 C 1 
HETATM 20 C C2A NAD . . . J 4 107.753 119.02 120.421 0.88 36.6 ? C2A NAD 401 C 1 
HETATM 21 N N3A NAD . . . J 4 107.7 117.915 121.157 0.88 36.6 ? N3A NAD 401 C 1 
HETATM 22 C C4A NAD . . . J 4 108.891 117.651 121.716 0.88 36.6 ? C4A NAD 401 C 1 
HETATM 23 O O3 NAD . . . J 4 111.64 114.412 127.719 0.88 36.6 ? O3 NAD 401 C 1 
HETATM 24 P PN NAD . . . J 4 111.971 114.388 129.288 0.88 36.6 ? PN NAD 401 C 1 
HETATM 25 O O1N NAD . . . J 4 111.258 113.229 129.9 0.88 36.6 ? O1N NAD 401 C 1 
HETATM 26 O O2N NAD . . . J 4 111.741 115.75 129.852 0.88 36.6 ? O2N NAD 401 C 1 
HETATM 27 O O5D NAD . . . J 4 113.544 114.081 129.272 0.88 36.6 ? O5D NAD 401 C 1 
HETATM 28 C C5D NAD . . . J 4 113.984 112.775 129.723 0.88 36.6 ? C5D NAD 401 C 1 
HETATM 29 C C4D NAD . . . J 4 114.842 112.935 130.954 0.88 36.6 ? C4D NAD 401 C 1 
HETATM 30 O O4D NAD . . . J 4 116.046 113.646 130.606 0.88 36.6 ? O4D NAD 401 C 1 
HETATM 31 C C3D NAD . . . J 4 114.232 113.721 132.126 0.88 36.6 ? C3D NAD 401 C 1 
HETATM 32 O O3D NAD . . . J 4 114.108 112.879 133.264 0.88 36.6 ? O3D NAD 401 C 1 
HETATM 33 C C2D NAD . . . J 4 115.26 114.84 132.343 0.88 36.6 ? C2D NAD 401 C 1 
HETATM 34 O O2D NAD . . . J 4 115.4 115.256 133.692 0.88 36.6 ? O2D NAD 401 C 1 
HETATM 35 C C1D NAD . . . J 4 116.548 114.261 131.772 0.88 36.6 ? C1D NAD 401 C 1 
HETATM 36 N N1N NAD . . . J 4 117.513 115.319 131.359 0.88 36.6 ? N1N NAD 401 C 1 
HETATM 37 C C2N NAD . . . J 4 117.437 115.86 130.102 0.88 36.6 ? C2N NAD 401 C 1 
HETATM 38 C C3N NAD . . . J 4 118.322 116.856 129.712 0.88 36.6 ? C3N NAD 401 C 1 
HETATM 39 C C7N NAD . . . J 4 118.21 117.418 128.318 0.88 36.6 ? C7N NAD 401 C 1 
HETATM 40 O O7N NAD . . . J 4 117.397 116.932 127.535 0.88 36.6 ? O7N NAD 401 C 1 
HETATM 41 N N7N NAD . . . J 4 119 118.432 128 0.88 36.6 ? N7N NAD 401 C 1 
HETATM 42 C C4N NAD . . . J 4 119.282 117.299 130.615 0.88 36.6 ? C4N NAD 401 C 1 
HETATM 43 C C5N NAD . . . J 4 119.351 116.74 131.87 0.88 36.6 ? C5N NAD 401 C 1 
HETATM 44 C C6N NAD . . . J 4 118.461 115.75 132.22 0.88 36.6 ? C6N NAD 401 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    43 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           44 
#