data_8A0Q # _model_server_result.job_id 8aW8xgwl3SJ2J1OQzoknhg _model_server_result.datetime_utc '2024-11-08 07:32:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8a0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8A0Q # _exptl.entry_id 8A0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8A0Q _cell.length_a 56.12 _cell.length_b 56.12 _cell.length_c 181.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8A0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 181.63 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H10 O5' _chem_comp.formula_weight 270.237 _chem_comp.id 3WL _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Baicalein # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C 3WL doub 1 n y C5 C4 3WL sing 2 n y C C1 3WL sing 3 n y C4 C3 3WL doub 4 n y C1 C2 3WL doub 5 n y C3 C2 3WL sing 6 n y C3 C6 3WL sing 7 n n C7 C6 3WL doub 8 n n C7 C8 3WL sing 9 n n O C8 3WL doub 10 n n C6 O1 3WL sing 11 n n C8 C9 3WL sing 12 n n O1 C14 3WL sing 13 n n C9 C14 3WL doub 14 n y C9 C10 3WL sing 15 n y O4 C10 3WL sing 16 n n C14 C13 3WL sing 17 n y C10 C11 3WL doub 18 n y C13 C12 3WL doub 19 n y C11 C12 3WL sing 20 n y C11 O3 3WL sing 21 n n C12 O2 3WL sing 22 n n C4 H1 3WL sing 23 n n C5 H2 3WL sing 24 n n C7 H3 3WL sing 25 n n C13 H4 3WL sing 26 n n O2 H5 3WL sing 27 n n O3 H6 3WL sing 28 n n O4 H7 3WL sing 29 n n C2 H8 3WL sing 30 n n C1 H9 3WL sing 31 n n C H10 3WL sing 32 n n # _atom_sites.entry_id 8A0Q _atom_sites.fract_transf_matrix[1][1] 0.017819 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005506 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3WL A 1 301 301 3WL 3WL . C 3 CL A 1 302 302 CL CL . D 4 HOH A 1 401 141 HOH HOH . D 4 HOH A 2 402 194 HOH HOH . D 4 HOH A 3 403 107 HOH HOH . D 4 HOH A 4 404 6 HOH HOH . D 4 HOH A 5 405 109 HOH HOH . D 4 HOH A 6 406 79 HOH HOH . D 4 HOH A 7 407 147 HOH HOH . D 4 HOH A 8 408 140 HOH HOH . D 4 HOH A 9 409 105 HOH HOH . D 4 HOH A 10 410 77 HOH HOH . D 4 HOH A 11 411 85 HOH HOH . D 4 HOH A 12 412 84 HOH HOH . D 4 HOH A 13 413 55 HOH HOH . D 4 HOH A 14 414 30 HOH HOH . D 4 HOH A 15 415 90 HOH HOH . D 4 HOH A 16 416 75 HOH HOH . D 4 HOH A 17 417 29 HOH HOH . D 4 HOH A 18 418 7 HOH HOH . D 4 HOH A 19 419 4 HOH HOH . D 4 HOH A 20 420 12 HOH HOH . D 4 HOH A 21 421 11 HOH HOH . D 4 HOH A 22 422 207 HOH HOH . D 4 HOH A 23 423 76 HOH HOH . D 4 HOH A 24 424 112 HOH HOH . D 4 HOH A 25 425 118 HOH HOH . D 4 HOH A 26 426 28 HOH HOH . D 4 HOH A 27 427 17 HOH HOH . D 4 HOH A 28 428 159 HOH HOH . D 4 HOH A 29 429 50 HOH HOH . D 4 HOH A 30 430 2 HOH HOH . D 4 HOH A 31 431 33 HOH HOH . D 4 HOH A 32 432 16 HOH HOH . D 4 HOH A 33 433 46 HOH HOH . D 4 HOH A 34 434 183 HOH HOH . D 4 HOH A 35 435 69 HOH HOH . D 4 HOH A 36 436 10 HOH HOH . D 4 HOH A 37 437 61 HOH HOH . D 4 HOH A 38 438 21 HOH HOH . D 4 HOH A 39 439 124 HOH HOH . D 4 HOH A 40 440 45 HOH HOH . D 4 HOH A 41 441 9 HOH HOH . D 4 HOH A 42 442 3 HOH HOH . D 4 HOH A 43 443 38 HOH HOH . D 4 HOH A 44 444 40 HOH HOH . D 4 HOH A 45 445 98 HOH HOH . D 4 HOH A 46 446 58 HOH HOH . D 4 HOH A 47 447 63 HOH HOH . D 4 HOH A 48 448 73 HOH HOH . D 4 HOH A 49 449 87 HOH HOH . D 4 HOH A 50 450 23 HOH HOH . D 4 HOH A 51 451 96 HOH HOH . D 4 HOH A 52 452 5 HOH HOH . D 4 HOH A 53 453 39 HOH HOH . D 4 HOH A 54 454 1 HOH HOH . D 4 HOH A 55 455 18 HOH HOH . D 4 HOH A 56 456 103 HOH HOH . D 4 HOH A 57 457 115 HOH HOH . D 4 HOH A 58 458 157 HOH HOH . D 4 HOH A 59 459 47 HOH HOH . D 4 HOH A 60 460 57 HOH HOH . D 4 HOH A 61 461 25 HOH HOH . D 4 HOH A 62 462 177 HOH HOH . D 4 HOH A 63 463 62 HOH HOH . D 4 HOH A 64 464 114 HOH HOH . D 4 HOH A 65 465 111 HOH HOH . D 4 HOH A 66 466 133 HOH HOH . D 4 HOH A 67 467 34 HOH HOH . D 4 HOH A 68 468 35 HOH HOH . D 4 HOH A 69 469 74 HOH HOH . D 4 HOH A 70 470 93 HOH HOH . D 4 HOH A 71 471 155 HOH HOH . D 4 HOH A 72 472 20 HOH HOH . D 4 HOH A 73 473 178 HOH HOH . D 4 HOH A 74 474 32 HOH HOH . D 4 HOH A 75 475 44 HOH HOH . D 4 HOH A 76 476 179 HOH HOH . D 4 HOH A 77 477 37 HOH HOH . D 4 HOH A 78 478 82 HOH HOH . D 4 HOH A 79 479 193 HOH HOH . D 4 HOH A 80 480 117 HOH HOH . D 4 HOH A 81 481 8 HOH HOH . D 4 HOH A 82 482 163 HOH HOH . D 4 HOH A 83 483 56 HOH HOH . D 4 HOH A 84 484 27 HOH HOH . D 4 HOH A 85 485 215 HOH HOH . D 4 HOH A 86 486 86 HOH HOH . D 4 HOH A 87 487 153 HOH HOH . D 4 HOH A 88 488 210 HOH HOH . D 4 HOH A 89 489 173 HOH HOH . D 4 HOH A 90 490 156 HOH HOH . D 4 HOH A 91 491 41 HOH HOH . D 4 HOH A 92 492 24 HOH HOH . D 4 HOH A 93 493 14 HOH HOH . D 4 HOH A 94 494 139 HOH HOH . D 4 HOH A 95 495 202 HOH HOH . D 4 HOH A 96 496 119 HOH HOH . D 4 HOH A 97 497 53 HOH HOH . D 4 HOH A 98 498 219 HOH HOH . D 4 HOH A 99 499 13 HOH HOH . D 4 HOH A 100 500 22 HOH HOH . D 4 HOH A 101 501 137 HOH HOH . D 4 HOH A 102 502 168 HOH HOH . D 4 HOH A 103 503 80 HOH HOH . D 4 HOH A 104 504 218 HOH HOH . D 4 HOH A 105 505 52 HOH HOH . D 4 HOH A 106 506 88 HOH HOH . D 4 HOH A 107 507 198 HOH HOH . D 4 HOH A 108 508 42 HOH HOH . D 4 HOH A 109 509 199 HOH HOH . D 4 HOH A 110 510 83 HOH HOH . D 4 HOH A 111 511 116 HOH HOH . D 4 HOH A 112 512 190 HOH HOH . D 4 HOH A 113 513 189 HOH HOH . D 4 HOH A 114 514 145 HOH HOH . D 4 HOH A 115 515 208 HOH HOH . D 4 HOH A 116 516 146 HOH HOH . D 4 HOH A 117 517 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 3WL . . . B 2 28.272 29.221 75.623 0.81 68.9 ? C4 3WL 301 A 1 HETATM 2 C C5 3WL . . . B 2 29.084 28.099 75.33 0.81 68.46 ? C5 3WL 301 A 1 HETATM 3 C C6 3WL . . . B 2 27.464 31.229 77.209 0.81 71.27 ? C6 3WL 301 A 1 HETATM 4 C C7 3WL . . . B 2 27.386 31.566 78.521 0.81 72.21 ? C7 3WL 301 A 1 HETATM 5 C C8 3WL . . . B 2 26.477 32.63 79.008 0.81 72.96 ? C8 3WL 301 A 1 HETATM 6 C C10 3WL . . . B 2 24.583 34.29 78.46 0.81 73.85 ? C10 3WL 301 A 1 HETATM 7 C C13 3WL . . . B 2 24.749 33.527 75.776 0.81 73.46 ? C13 3WL 301 A 1 HETATM 8 O O 3WL . . . B 2 26.463 32.906 80.227 0.81 73.22 ? O 3WL 301 A 1 HETATM 9 C C9 3WL . . . B 2 25.529 33.279 78.084 0.81 73.29 ? C9 3WL 301 A 1 HETATM 10 C C14 3WL . . . B 2 25.622 32.863 76.734 0.81 72.93 ? C14 3WL 301 A 1 HETATM 11 C C12 3WL . . . B 2 23.783 34.49 76.179 0.81 73.88 ? C12 3WL 301 A 1 HETATM 12 O O2 3WL . . . B 2 22.927 35.107 75.283 0.81 73.99 ? O2 3WL 301 A 1 HETATM 13 C C11 3WL . . . B 2 23.698 34.895 77.54 0.81 74.01 ? C11 3WL 301 A 1 HETATM 14 O O3 3WL . . . B 2 22.808 35.855 77.965 0.81 74.28 ? O3 3WL 301 A 1 HETATM 15 O O4 3WL . . . B 2 24.56 34.632 79.791 0.81 74.05 ? O4 3WL 301 A 1 HETATM 16 O O1 3WL . . . B 2 26.533 31.845 76.327 0.81 72.06 ? O1 3WL 301 A 1 HETATM 17 C C3 3WL . . . B 2 28.41 30.013 76.792 0.81 69.65 ? C3 3WL 301 A 1 HETATM 18 C C2 3WL . . . B 2 29.4 29.513 77.678 0.81 69.07 ? C2 3WL 301 A 1 HETATM 19 C C1 3WL . . . B 2 30.22 28.396 77.401 0.81 68.69 ? C1 3WL 301 A 1 HETATM 20 C C 3WL . . . B 2 30.077 27.674 76.213 0.81 68.37 ? C 3WL 301 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 20 #