data_8A0R # _model_server_result.job_id zvTb2V0gkBG75B79nU_8lQ _model_server_result.datetime_utc '2024-11-08 08:46:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8a0r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 8A0R # _exptl.entry_id 8A0R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8A0R _cell.length_a 56.338 _cell.length_b 56.338 _cell.length_c 182.615 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8A0R _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 182.615 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 367 n n C C2 TRS sing 368 n n C C3 TRS sing 369 n n C N TRS sing 370 n n C1 O1 TRS sing 371 n n C1 H11 TRS sing 372 n n C1 H12 TRS sing 373 n n C2 O2 TRS sing 374 n n C2 H21 TRS sing 375 n n C2 H22 TRS sing 376 n n C3 O3 TRS sing 377 n n C3 H31 TRS sing 378 n n C3 H32 TRS sing 379 n n N HN1 TRS sing 380 n n N HN2 TRS sing 381 n n N HN3 TRS sing 382 n n O1 HO1 TRS sing 383 n n O2 HO2 TRS sing 384 n n O3 HO3 TRS sing 385 n n # _atom_sites.entry_id 8A0R _atom_sites.fract_transf_matrix[1][1] 0.01775 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KML A 1 301 301 KML PIN . C 3 CL A 1 302 302 CL CL . D 4 TRS A 1 303 303 TRS TRS . E 5 HOH A 1 401 187 HOH HOH . E 5 HOH A 2 402 10 HOH HOH . E 5 HOH A 3 403 125 HOH HOH . E 5 HOH A 4 404 130 HOH HOH . E 5 HOH A 5 405 168 HOH HOH . E 5 HOH A 6 406 231 HOH HOH . E 5 HOH A 7 407 200 HOH HOH . E 5 HOH A 8 408 191 HOH HOH . E 5 HOH A 9 409 75 HOH HOH . E 5 HOH A 10 410 230 HOH HOH . E 5 HOH A 11 411 93 HOH HOH . E 5 HOH A 12 412 195 HOH HOH . E 5 HOH A 13 413 192 HOH HOH . E 5 HOH A 14 414 120 HOH HOH . E 5 HOH A 15 415 198 HOH HOH . E 5 HOH A 16 416 19 HOH HOH . E 5 HOH A 17 417 28 HOH HOH . E 5 HOH A 18 418 85 HOH HOH . E 5 HOH A 19 419 148 HOH HOH . E 5 HOH A 20 420 193 HOH HOH . E 5 HOH A 21 421 140 HOH HOH . E 5 HOH A 22 422 215 HOH HOH . E 5 HOH A 23 423 135 HOH HOH . E 5 HOH A 24 424 16 HOH HOH . E 5 HOH A 25 425 6 HOH HOH . E 5 HOH A 26 426 7 HOH HOH . E 5 HOH A 27 427 126 HOH HOH . E 5 HOH A 28 428 4 HOH HOH . E 5 HOH A 29 429 73 HOH HOH . E 5 HOH A 30 430 185 HOH HOH . E 5 HOH A 31 431 190 HOH HOH . E 5 HOH A 32 432 45 HOH HOH . E 5 HOH A 33 433 80 HOH HOH . E 5 HOH A 34 434 81 HOH HOH . E 5 HOH A 35 435 65 HOH HOH . E 5 HOH A 36 436 171 HOH HOH . E 5 HOH A 37 437 86 HOH HOH . E 5 HOH A 38 438 217 HOH HOH . E 5 HOH A 39 439 26 HOH HOH . E 5 HOH A 40 440 12 HOH HOH . E 5 HOH A 41 441 127 HOH HOH . E 5 HOH A 42 442 108 HOH HOH . E 5 HOH A 43 443 15 HOH HOH . E 5 HOH A 44 444 109 HOH HOH . E 5 HOH A 45 445 149 HOH HOH . E 5 HOH A 46 446 29 HOH HOH . E 5 HOH A 47 447 236 HOH HOH . E 5 HOH A 48 448 170 HOH HOH . E 5 HOH A 49 449 9 HOH HOH . E 5 HOH A 50 450 72 HOH HOH . E 5 HOH A 51 451 17 HOH HOH . E 5 HOH A 52 452 111 HOH HOH . E 5 HOH A 53 453 100 HOH HOH . E 5 HOH A 54 454 71 HOH HOH . E 5 HOH A 55 455 101 HOH HOH . E 5 HOH A 56 456 131 HOH HOH . E 5 HOH A 57 457 27 HOH HOH . E 5 HOH A 58 458 207 HOH HOH . E 5 HOH A 59 459 151 HOH HOH . E 5 HOH A 60 460 223 HOH HOH . E 5 HOH A 61 461 3 HOH HOH . E 5 HOH A 62 462 11 HOH HOH . E 5 HOH A 63 463 197 HOH HOH . E 5 HOH A 64 464 212 HOH HOH . E 5 HOH A 65 465 67 HOH HOH . E 5 HOH A 66 466 34 HOH HOH . E 5 HOH A 67 467 204 HOH HOH . E 5 HOH A 68 468 66 HOH HOH . E 5 HOH A 69 469 188 HOH HOH . E 5 HOH A 70 470 177 HOH HOH . E 5 HOH A 71 471 199 HOH HOH . E 5 HOH A 72 472 145 HOH HOH . E 5 HOH A 73 473 21 HOH HOH . E 5 HOH A 74 474 224 HOH HOH . E 5 HOH A 75 475 245 HOH HOH . E 5 HOH A 76 476 143 HOH HOH . E 5 HOH A 77 477 61 HOH HOH . E 5 HOH A 78 478 118 HOH HOH . E 5 HOH A 79 479 54 HOH HOH . E 5 HOH A 80 480 121 HOH HOH . E 5 HOH A 81 481 160 HOH HOH . E 5 HOH A 82 482 32 HOH HOH . E 5 HOH A 83 483 132 HOH HOH . E 5 HOH A 84 484 76 HOH HOH . E 5 HOH A 85 485 49 HOH HOH . E 5 HOH A 86 486 50 HOH HOH . E 5 HOH A 87 487 159 HOH HOH . E 5 HOH A 88 488 57 HOH HOH . E 5 HOH A 89 489 107 HOH HOH . E 5 HOH A 90 490 1 HOH HOH . E 5 HOH A 91 491 92 HOH HOH . E 5 HOH A 92 492 98 HOH HOH . E 5 HOH A 93 493 38 HOH HOH . E 5 HOH A 94 494 59 HOH HOH . E 5 HOH A 95 495 56 HOH HOH . E 5 HOH A 96 496 70 HOH HOH . E 5 HOH A 97 497 96 HOH HOH . E 5 HOH A 98 498 142 HOH HOH . E 5 HOH A 99 499 51 HOH HOH . E 5 HOH A 100 500 55 HOH HOH . E 5 HOH A 101 501 162 HOH HOH . E 5 HOH A 102 502 95 HOH HOH . E 5 HOH A 103 503 147 HOH HOH . E 5 HOH A 104 504 39 HOH HOH . E 5 HOH A 105 505 82 HOH HOH . E 5 HOH A 106 506 90 HOH HOH . E 5 HOH A 107 507 2 HOH HOH . E 5 HOH A 108 508 88 HOH HOH . E 5 HOH A 109 509 221 HOH HOH . E 5 HOH A 110 510 134 HOH HOH . E 5 HOH A 111 511 102 HOH HOH . E 5 HOH A 112 512 103 HOH HOH . E 5 HOH A 113 513 44 HOH HOH . E 5 HOH A 114 514 89 HOH HOH . E 5 HOH A 115 515 60 HOH HOH . E 5 HOH A 116 516 78 HOH HOH . E 5 HOH A 117 517 189 HOH HOH . E 5 HOH A 118 518 228 HOH HOH . E 5 HOH A 119 519 136 HOH HOH . E 5 HOH A 120 520 18 HOH HOH . E 5 HOH A 121 521 128 HOH HOH . E 5 HOH A 122 522 152 HOH HOH . E 5 HOH A 123 523 46 HOH HOH . E 5 HOH A 124 524 5 HOH HOH . E 5 HOH A 125 525 23 HOH HOH . E 5 HOH A 126 526 31 HOH HOH . E 5 HOH A 127 527 133 HOH HOH . E 5 HOH A 128 528 20 HOH HOH . E 5 HOH A 129 529 169 HOH HOH . E 5 HOH A 130 530 229 HOH HOH . E 5 HOH A 131 531 232 HOH HOH . E 5 HOH A 132 532 206 HOH HOH . E 5 HOH A 133 533 211 HOH HOH . E 5 HOH A 134 534 154 HOH HOH . E 5 HOH A 135 535 87 HOH HOH . E 5 HOH A 136 536 112 HOH HOH . E 5 HOH A 137 537 64 HOH HOH . E 5 HOH A 138 538 105 HOH HOH . E 5 HOH A 139 539 83 HOH HOH . E 5 HOH A 140 540 167 HOH HOH . E 5 HOH A 141 541 155 HOH HOH . E 5 HOH A 142 542 37 HOH HOH . E 5 HOH A 143 543 30 HOH HOH . E 5 HOH A 144 544 25 HOH HOH . E 5 HOH A 145 545 214 HOH HOH . E 5 HOH A 146 546 213 HOH HOH . E 5 HOH A 147 547 104 HOH HOH . E 5 HOH A 148 548 226 HOH HOH . E 5 HOH A 149 549 219 HOH HOH . E 5 HOH A 150 550 36 HOH HOH . E 5 HOH A 151 551 69 HOH HOH . E 5 HOH A 152 552 137 HOH HOH . E 5 HOH A 153 553 158 HOH HOH . E 5 HOH A 154 554 227 HOH HOH . E 5 HOH A 155 555 8 HOH HOH . E 5 HOH A 156 556 33 HOH HOH . E 5 HOH A 157 557 184 HOH HOH . E 5 HOH A 158 558 124 HOH HOH . E 5 HOH A 159 559 146 HOH HOH . E 5 HOH A 160 560 174 HOH HOH . E 5 HOH A 161 561 110 HOH HOH . E 5 HOH A 162 562 122 HOH HOH . E 5 HOH A 163 563 141 HOH HOH . E 5 HOH A 164 564 22 HOH HOH . E 5 HOH A 165 565 201 HOH HOH . E 5 HOH A 166 566 43 HOH HOH . E 5 HOH A 167 567 216 HOH HOH . E 5 HOH A 168 568 14 HOH HOH . E 5 HOH A 169 569 157 HOH HOH . E 5 HOH A 170 570 119 HOH HOH . E 5 HOH A 171 571 186 HOH HOH . E 5 HOH A 172 572 220 HOH HOH . E 5 HOH A 173 573 123 HOH HOH . E 5 HOH A 174 574 218 HOH HOH . E 5 HOH A 175 575 84 HOH HOH . E 5 HOH A 176 576 24 HOH HOH . E 5 HOH A 177 577 203 HOH HOH . E 5 HOH A 178 578 144 HOH HOH . E 5 HOH A 179 579 210 HOH HOH . E 5 HOH A 180 580 58 HOH HOH . E 5 HOH A 181 581 234 HOH HOH . E 5 HOH A 182 582 68 HOH HOH . E 5 HOH A 183 583 222 HOH HOH . E 5 HOH A 184 584 150 HOH HOH . E 5 HOH A 185 585 225 HOH HOH . E 5 HOH A 186 586 138 HOH HOH . E 5 HOH A 187 587 62 HOH HOH . E 5 HOH A 188 588 202 HOH HOH . E 5 HOH A 189 589 208 HOH HOH . E 5 HOH A 190 590 209 HOH HOH . E 5 HOH A 191 591 52 HOH HOH . E 5 HOH A 192 592 74 HOH HOH . E 5 HOH A 193 593 47 HOH HOH . E 5 HOH A 194 594 182 HOH HOH . E 5 HOH A 195 595 205 HOH HOH . E 5 HOH A 196 596 175 HOH HOH . E 5 HOH A 197 597 172 HOH HOH . E 5 HOH A 198 598 41 HOH HOH . E 5 HOH A 199 599 244 HOH HOH . E 5 HOH A 200 600 113 HOH HOH . E 5 HOH A 201 601 173 HOH HOH . E 5 HOH A 202 602 183 HOH HOH . E 5 HOH A 203 603 163 HOH HOH . E 5 HOH A 204 604 166 HOH HOH . E 5 HOH A 205 605 116 HOH HOH . E 5 HOH A 206 606 79 HOH HOH . E 5 HOH A 207 607 181 HOH HOH . E 5 HOH A 208 608 94 HOH HOH . E 5 HOH A 209 609 180 HOH HOH . E 5 HOH A 210 610 63 HOH HOH . E 5 HOH A 211 611 99 HOH HOH . E 5 HOH A 212 612 243 HOH HOH . E 5 HOH A 213 613 242 HOH HOH . E 5 HOH A 214 614 178 HOH HOH . E 5 HOH A 215 615 241 HOH HOH . E 5 HOH A 216 616 114 HOH HOH . E 5 HOH A 217 617 139 HOH HOH . E 5 HOH A 218 618 42 HOH HOH . E 5 HOH A 219 619 48 HOH HOH . E 5 HOH A 220 620 238 HOH HOH . E 5 HOH A 221 621 129 HOH HOH . E 5 HOH A 222 622 164 HOH HOH . E 5 HOH A 223 623 239 HOH HOH . E 5 HOH A 224 624 53 HOH HOH . E 5 HOH A 225 625 165 HOH HOH . E 5 HOH A 226 626 117 HOH HOH . E 5 HOH A 227 627 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 4 1.511 17.071 75.2 1 57.71 ? C TRS 303 A 1 HETATM 2 C C1 TRS . . . D 4 0.658 15.935 75.778 1 58.19 ? C1 TRS 303 A 1 HETATM 3 C C2 TRS . . . D 4 0.783 18.415 75.339 1 57.72 ? C2 TRS 303 A 1 HETATM 4 C C3 TRS . . . D 4 2.876 17.124 75.891 1 57.38 ? C3 TRS 303 A 1 HETATM 5 N N TRS . . . D 4 1.734 16.802 73.739 1 57.64 ? N TRS 303 A 1 HETATM 6 O O1 TRS . . . D 4 1.185 14.655 75.449 1 58.59 ? O1 TRS 303 A 1 HETATM 7 O O2 TRS . . . D 4 1.441 19.459 74.629 1 57.56 ? O2 TRS 303 A 1 HETATM 8 O O3 TRS . . . D 4 3.523 15.857 75.886 1 56.86 ? O3 TRS 303 A 1 HETATM 9 H H11 TRS . . . D 4 -0.371 16.016 75.429 0 58.19 ? H11 TRS 303 A 1 HETATM 10 H H12 TRS . . . D 4 0.607 16.03 76.862 0 58.19 ? H12 TRS 303 A 1 HETATM 11 H H21 TRS . . . D 4 0.754 18.75 76.374 0 57.72 ? H21 TRS 303 A 1 HETATM 12 H H22 TRS . . . D 4 -0.257 18.295 75.039 0 57.72 ? H22 TRS 303 A 1 HETATM 13 H H31 TRS . . . D 4 2.755 17.561 76.881 0 57.38 ? H31 TRS 303 A 1 HETATM 14 H H32 TRS . . . D 4 3.559 17.787 75.362 0 57.38 ? H32 TRS 303 A 1 HETATM 15 H HN1 TRS . . . D 4 2.408 16.056 73.6 0 57.64 ? HN1 TRS 303 A 1 HETATM 16 H HN2 TRS . . . D 4 2.066 17.631 73.256 0 57.64 ? HN2 TRS 303 A 1 HETATM 17 H HN3 TRS . . . D 4 0.865 16.517 73.298 0 57.64 ? HN3 TRS 303 A 1 HETATM 18 H HO1 TRS . . . D 4 0.831 14.402 74.556 0 58.59 ? HO1 TRS 303 A 1 HETATM 19 H HO2 TRS . . . D 4 0.979 19.579 73.759 0 57.56 ? HO2 TRS 303 A 1 HETATM 20 H HO3 TRS . . . D 4 3.692 15.579 76.825 0 56.86 ? HO3 TRS 303 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #