data_8A1U
#
_model_server_result.job_id            UWNxDWv7UR_z4ctP86iUcQ 
_model_server_result.datetime_utc      '2024-10-19 11:25:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8a1u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":509}' 
#
_entry.id    8A1U 
#
_exptl.entry_id    8A1U 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          12 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8A1U 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8A1U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 12 O N N 
? 12 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? 
covale ? covale2 C OG1 THR 225 C THR 225 1_555 Q P FMN . C FMN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.603 ? 
metalc ? metalc1 B O ALA 263 B ALA 263 1_555 O NA NA . B NA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? 
metalc ? metalc2 B O VAL 275 B VAL 275 1_555 O NA NA . B NA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc3 B O VAL 332 B VAL 332 1_555 O NA NA . B NA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? 
metalc ? metalc4 B O ILE 371 B ILE 371 1_555 P NA NA . B NA 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.132 ? 
metalc ? metalc5 B O ARG 372 B ARG 372 1_555 P NA NA . B NA 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? 
metalc ? metalc6 B O ASN 375 B ASN 375 1_555 P NA NA . B NA 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc7 B O TYR 378 B TYR 378 1_555 P NA NA . B NA 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc8 O NA NA . B NA 509 1_555 Y O HOH . B HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? 
metalc ? metalc9 O NA NA . B NA 509 1_555 Y O HOH . B HOH 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.064 ? 
metalc ? metalc10 P NA NA . B NA 510 1_555 Y O HOH . B HOH 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc11 D SG CYS 29 D CYS 29 1_555 T FE2 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc12 D SG CYS 112 D CYS 112 1_555 T FE1 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc13 E SG CYS 26 E CYS 26 1_555 T FE1 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc14 E SG CYS 120 E CYS 120 1_555 T FE2 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc15 F SG CYS 70 F CYS 70 1_555 V FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc16 F SG CYS 76 F CYS 76 1_555 V FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc17 F SG CYS 79 F CYS 79 1_555 V FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc18 F SG CYS 111 F CYS 111 1_555 V FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8A1U 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 7 FMN B 1 501 501 FMN FMN . 
H 8 RBF B 1 502 502 RBF RBF . 
I 9 LMT B 1 503 503 LMT LMT . 
J 10 3PE B 1 504 504 3PE 3PE . 
K 9 LMT B 1 505 505 LMT LMT . 
L 10 3PE B 1 506 506 3PE 3PE . 
M 11 UQ2 B 1 507 507 UQ2 UQ2 . 
N 10 3PE B 1 508 508 3PE 3PE . 
O 12 NA B 1 509 509 NA NA . 
P 12 NA B 1 510 510 NA NA . 
Q 7 FMN C 1 1000 1000 FMN FMN . 
R 10 3PE D 1 301 301 3PE 3PE . 
S 9 LMT D 1 302 302 LMT LMT . 
T 13 FES E 1 1001 1001 FES FES . 
U 14 FAD F 1 1501 1501 FAD FAD . 
V 13 FES F 1 1502 1502 FES FES . 
W 15 NAI F 1 1503 1503 NAI NAI . 
X 16 HOH A 1 801 801 HOH HOH . 
X 16 HOH A 2 802 802 HOH HOH . 
X 16 HOH A 3 803 803 HOH HOH . 
X 16 HOH A 4 804 804 HOH HOH . 
X 16 HOH A 5 805 805 HOH HOH . 
X 16 HOH A 6 806 806 HOH HOH . 
X 16 HOH A 7 807 807 HOH HOH . 
X 16 HOH A 8 808 808 HOH HOH . 
X 16 HOH A 9 809 809 HOH HOH . 
X 16 HOH A 10 810 810 HOH HOH . 
X 16 HOH A 11 811 811 HOH HOH . 
X 16 HOH A 12 812 812 HOH HOH . 
X 16 HOH A 13 813 813 HOH HOH . 
X 16 HOH A 14 814 814 HOH HOH . 
X 16 HOH A 15 815 815 HOH HOH . 
X 16 HOH A 16 816 816 HOH HOH . 
X 16 HOH A 17 817 817 HOH HOH . 
X 16 HOH A 18 818 818 HOH HOH . 
X 16 HOH A 19 819 819 HOH HOH . 
X 16 HOH A 20 820 820 HOH HOH . 
X 16 HOH A 21 821 821 HOH HOH . 
X 16 HOH A 22 822 822 HOH HOH . 
X 16 HOH A 23 823 823 HOH HOH . 
X 16 HOH A 24 824 824 HOH HOH . 
X 16 HOH A 25 825 825 HOH HOH . 
X 16 HOH A 26 826 826 HOH HOH . 
X 16 HOH A 27 827 827 HOH HOH . 
X 16 HOH A 28 828 828 HOH HOH . 
X 16 HOH A 29 829 829 HOH HOH . 
X 16 HOH A 30 830 830 HOH HOH . 
X 16 HOH A 31 831 831 HOH HOH . 
X 16 HOH A 32 832 832 HOH HOH . 
X 16 HOH A 33 833 833 HOH HOH . 
X 16 HOH A 34 834 834 HOH HOH . 
X 16 HOH A 35 835 835 HOH HOH . 
X 16 HOH A 36 836 836 HOH HOH . 
X 16 HOH A 37 837 837 HOH HOH . 
X 16 HOH A 38 838 838 HOH HOH . 
X 16 HOH A 39 839 839 HOH HOH . 
X 16 HOH A 40 840 840 HOH HOH . 
X 16 HOH A 41 841 841 HOH HOH . 
X 16 HOH A 42 842 842 HOH HOH . 
X 16 HOH A 43 843 843 HOH HOH . 
X 16 HOH A 44 844 844 HOH HOH . 
X 16 HOH A 45 845 845 HOH HOH . 
X 16 HOH A 46 846 846 HOH HOH . 
X 16 HOH A 47 847 847 HOH HOH . 
X 16 HOH A 48 848 848 HOH HOH . 
X 16 HOH A 49 849 849 HOH HOH . 
X 16 HOH A 50 850 850 HOH HOH . 
X 16 HOH A 51 851 851 HOH HOH . 
X 16 HOH A 52 852 852 HOH HOH . 
X 16 HOH A 53 853 853 HOH HOH . 
X 16 HOH A 54 854 854 HOH HOH . 
X 16 HOH A 55 855 855 HOH HOH . 
X 16 HOH A 56 856 856 HOH HOH . 
X 16 HOH A 57 857 857 HOH HOH . 
X 16 HOH A 58 858 858 HOH HOH . 
X 16 HOH A 59 859 859 HOH HOH . 
X 16 HOH A 60 860 860 HOH HOH . 
X 16 HOH A 61 861 861 HOH HOH . 
X 16 HOH A 62 862 862 HOH HOH . 
X 16 HOH A 63 863 863 HOH HOH . 
X 16 HOH A 64 864 864 HOH HOH . 
X 16 HOH A 65 865 865 HOH HOH . 
X 16 HOH A 66 866 866 HOH HOH . 
X 16 HOH A 67 867 867 HOH HOH . 
X 16 HOH A 68 868 868 HOH HOH . 
X 16 HOH A 69 869 869 HOH HOH . 
X 16 HOH A 70 870 870 HOH HOH . 
X 16 HOH A 71 871 871 HOH HOH . 
X 16 HOH A 72 872 872 HOH HOH . 
X 16 HOH A 73 873 873 HOH HOH . 
X 16 HOH A 74 874 874 HOH HOH . 
X 16 HOH A 75 875 875 HOH HOH . 
X 16 HOH A 76 876 876 HOH HOH . 
X 16 HOH A 77 877 877 HOH HOH . 
X 16 HOH A 78 878 878 HOH HOH . 
X 16 HOH A 79 879 879 HOH HOH . 
X 16 HOH A 80 880 880 HOH HOH . 
X 16 HOH A 81 881 881 HOH HOH . 
X 16 HOH A 82 882 882 HOH HOH . 
X 16 HOH A 83 883 883 HOH HOH . 
X 16 HOH A 84 884 884 HOH HOH . 
X 16 HOH A 85 885 885 HOH HOH . 
X 16 HOH A 86 886 886 HOH HOH . 
X 16 HOH A 87 887 887 HOH HOH . 
X 16 HOH A 88 888 888 HOH HOH . 
X 16 HOH A 89 889 889 HOH HOH . 
X 16 HOH A 90 890 890 HOH HOH . 
X 16 HOH A 91 891 891 HOH HOH . 
X 16 HOH A 92 892 892 HOH HOH . 
X 16 HOH A 93 893 893 HOH HOH . 
X 16 HOH A 94 894 894 HOH HOH . 
X 16 HOH A 95 895 895 HOH HOH . 
X 16 HOH A 96 896 896 HOH HOH . 
Y 16 HOH B 1 601 601 HOH HOH . 
Y 16 HOH B 2 602 602 HOH HOH . 
Y 16 HOH B 3 603 603 HOH HOH . 
Y 16 HOH B 4 604 604 HOH HOH . 
Y 16 HOH B 5 605 605 HOH HOH . 
Y 16 HOH B 6 606 606 HOH HOH . 
Y 16 HOH B 7 607 607 HOH HOH . 
Y 16 HOH B 8 608 608 HOH HOH . 
Y 16 HOH B 9 609 609 HOH HOH . 
Y 16 HOH B 10 610 610 HOH HOH . 
Y 16 HOH B 11 611 611 HOH HOH . 
Y 16 HOH B 12 612 612 HOH HOH . 
Y 16 HOH B 13 613 613 HOH HOH . 
Y 16 HOH B 14 614 614 HOH HOH . 
Y 16 HOH B 15 615 615 HOH HOH . 
Y 16 HOH B 16 616 616 HOH HOH . 
Y 16 HOH B 17 617 617 HOH HOH . 
Y 16 HOH B 18 618 618 HOH HOH . 
Y 16 HOH B 19 619 619 HOH HOH . 
Y 16 HOH B 20 620 620 HOH HOH . 
Y 16 HOH B 21 621 621 HOH HOH . 
Y 16 HOH B 22 622 622 HOH HOH . 
Y 16 HOH B 23 623 623 HOH HOH . 
Y 16 HOH B 24 624 624 HOH HOH . 
Y 16 HOH B 25 625 625 HOH HOH . 
Y 16 HOH B 26 626 626 HOH HOH . 
Y 16 HOH B 27 627 627 HOH HOH . 
Y 16 HOH B 28 628 628 HOH HOH . 
Y 16 HOH B 29 629 629 HOH HOH . 
Y 16 HOH B 30 630 630 HOH HOH . 
Y 16 HOH B 31 631 631 HOH HOH . 
Y 16 HOH B 32 632 632 HOH HOH . 
Y 16 HOH B 33 633 633 HOH HOH . 
Y 16 HOH B 34 634 634 HOH HOH . 
Y 16 HOH B 35 635 635 HOH HOH . 
Y 16 HOH B 36 636 636 HOH HOH . 
Y 16 HOH B 37 637 637 HOH HOH . 
Y 16 HOH B 38 638 638 HOH HOH . 
Y 16 HOH B 39 639 639 HOH HOH . 
Y 16 HOH B 40 640 640 HOH HOH . 
Y 16 HOH B 41 641 641 HOH HOH . 
Y 16 HOH B 42 642 642 HOH HOH . 
Y 16 HOH B 43 643 643 HOH HOH . 
Y 16 HOH B 44 644 644 HOH HOH . 
Y 16 HOH B 45 645 645 HOH HOH . 
Y 16 HOH B 46 646 646 HOH HOH . 
Y 16 HOH B 47 647 647 HOH HOH . 
Y 16 HOH B 48 648 648 HOH HOH . 
Y 16 HOH B 49 649 649 HOH HOH . 
Y 16 HOH B 50 650 650 HOH HOH . 
Y 16 HOH B 51 651 651 HOH HOH . 
Y 16 HOH B 52 652 652 HOH HOH . 
Y 16 HOH B 53 653 653 HOH HOH . 
Y 16 HOH B 54 654 654 HOH HOH . 
Y 16 HOH B 55 655 655 HOH HOH . 
Y 16 HOH B 56 656 656 HOH HOH . 
Y 16 HOH B 57 657 657 HOH HOH . 
Y 16 HOH B 58 658 658 HOH HOH . 
Y 16 HOH B 59 659 659 HOH HOH . 
Y 16 HOH B 60 660 660 HOH HOH . 
Y 16 HOH B 61 661 661 HOH HOH . 
Y 16 HOH B 62 662 662 HOH HOH . 
Y 16 HOH B 63 663 663 HOH HOH . 
Y 16 HOH B 64 664 664 HOH HOH . 
Y 16 HOH B 65 665 665 HOH HOH . 
Y 16 HOH B 66 666 666 HOH HOH . 
Y 16 HOH B 67 667 667 HOH HOH . 
Y 16 HOH B 68 668 668 HOH HOH . 
Y 16 HOH B 69 669 669 HOH HOH . 
Y 16 HOH B 70 670 670 HOH HOH . 
Y 16 HOH B 71 671 671 HOH HOH . 
Y 16 HOH B 72 672 672 HOH HOH . 
Y 16 HOH B 73 673 673 HOH HOH . 
Z 16 HOH C 1 1101 1101 HOH HOH . 
Z 16 HOH C 2 1102 1102 HOH HOH . 
Z 16 HOH C 3 1103 1103 HOH HOH . 
Z 16 HOH C 4 1104 1104 HOH HOH . 
AA 16 HOH D 1 401 401 HOH HOH . 
AA 16 HOH D 2 402 402 HOH HOH . 
AA 16 HOH D 3 403 403 HOH HOH . 
AA 16 HOH D 4 404 404 HOH HOH . 
BA 16 HOH E 1 1101 1101 HOH HOH . 
BA 16 HOH E 2 1102 1102 HOH HOH . 
BA 16 HOH E 3 1103 1103 HOH HOH . 
BA 16 HOH E 4 1104 1104 HOH HOH . 
BA 16 HOH E 5 1105 1105 HOH HOH . 
BA 16 HOH E 6 1106 1106 HOH HOH . 
BA 16 HOH E 7 1107 1107 HOH HOH . 
BA 16 HOH E 8 1108 1108 HOH HOH . 
BA 16 HOH E 9 1109 1109 HOH HOH . 
CA 16 HOH F 1 1601 1601 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         O 
_atom_site.label_entity_id       12 
_atom_site.Cartn_x               113.297 
_atom_site.Cartn_y               117.082 
_atom_site.Cartn_z               148.467 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        28.5 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           509 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#