data_8A1X # _model_server_result.job_id 7tMkcX8R0rWf07b2jAfOvA _model_server_result.datetime_utc '2024-11-26 23:51:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8a1x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":503}' # _entry.id 8A1X # _exptl.entry_id 8A1X _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8A1X _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8A1X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 I N N ? 9 J N N ? 9 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? covale ? covale2 C OG1 THR 225 C THR 225 1_555 L P FMN . C FMN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.605 ? metalc ? metalc1 D SG CYS 29 D CYS 29 1_555 O FE2 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc2 D SG CYS 112 D CYS 112 1_555 O FE1 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc3 E SG CYS 26 E CYS 26 1_555 O FE1 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc4 E SG CYS 120 E CYS 120 1_555 O FE2 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc5 F SG CYS 70 F CYS 70 1_555 Q FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc6 F SG CYS 76 F CYS 76 1_555 Q FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc7 F SG CYS 79 F CYS 79 1_555 Q FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc8 F SG CYS 111 F CYS 111 1_555 Q FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 473 n n C1B O1B LMT sing 474 n n C1B O5B LMT sing 475 n n C1B H1B LMT sing 476 n n C2B C3B LMT sing 477 n n C2B O2B LMT sing 478 n n C2B H2B LMT sing 479 n n C3B C4B LMT sing 480 n n C3B O3B LMT sing 481 n n C3B H3B LMT sing 482 n n C4B C5B LMT sing 483 n n C4B O4' LMT sing 484 n n C4B H4B LMT sing 485 n n C5B C6B LMT sing 486 n n C5B O5B LMT sing 487 n n C5B H5B LMT sing 488 n n C6B O6B LMT sing 489 n n C6B "H6'2" LMT sing 490 n n C6B "H6'1" LMT sing 491 n n O1B C4' LMT sing 492 n n O2B H2O1 LMT sing 493 n n O3B H3O1 LMT sing 494 n n O4' H4O1 LMT sing 495 n n O6B H6B LMT sing 496 n n C1' C2' LMT sing 497 n n C1' O1' LMT sing 498 n n C1' O5' LMT sing 499 n n C1' H1' LMT sing 500 n n C2' C3' LMT sing 501 n n C2' O2' LMT sing 502 n n C2' H2' LMT sing 503 n n C3' C4' LMT sing 504 n n C3' O3' LMT sing 505 n n C3' H3' LMT sing 506 n n C4' C5' LMT sing 507 n n C4' H4' LMT sing 508 n n C5' C6' LMT sing 509 n n C5' O5' LMT sing 510 n n C5' H5' LMT sing 511 n n C6' O6' LMT sing 512 n n C6' H6D LMT sing 513 n n C6' H6E LMT sing 514 n n O1' C1 LMT sing 515 n n O2' H2O2 LMT sing 516 n n O3' H3O2 LMT sing 517 n n O6' H6' LMT sing 518 n n C1 C2 LMT sing 519 n n C1 H12 LMT sing 520 n n C1 H11 LMT sing 521 n n C2 C3 LMT sing 522 n n C2 H22 LMT sing 523 n n C2 H21 LMT sing 524 n n C3 C4 LMT sing 525 n n C3 H32 LMT sing 526 n n C3 H31 LMT sing 527 n n C4 C5 LMT sing 528 n n C4 H42 LMT sing 529 n n C4 H41 LMT sing 530 n n C5 C6 LMT sing 531 n n C5 H52 LMT sing 532 n n C5 H51 LMT sing 533 n n C6 C7 LMT sing 534 n n C6 H62 LMT sing 535 n n C6 H61 LMT sing 536 n n C7 C8 LMT sing 537 n n C7 H72 LMT sing 538 n n C7 H71 LMT sing 539 n n C8 C9 LMT sing 540 n n C8 H82 LMT sing 541 n n C8 H81 LMT sing 542 n n C9 C10 LMT sing 543 n n C9 H92 LMT sing 544 n n C9 H91 LMT sing 545 n n C10 C11 LMT sing 546 n n C10 H102 LMT sing 547 n n C10 H101 LMT sing 548 n n C11 C12 LMT sing 549 n n C11 H112 LMT sing 550 n n C11 H111 LMT sing 551 n n C12 H123 LMT sing 552 n n C12 H122 LMT sing 553 n n C12 H121 LMT sing 554 n n # _atom_sites.entry_id 8A1X _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 FMN B 1 501 600 FMN FMN . H 8 RBF B 1 502 601 RBF RBF . I 9 LMT B 1 503 603 LMT LMT . J 9 LMT B 1 504 605 LMT LMT . K 10 3PE B 1 505 606 3PE 3PE . L 7 FMN C 1 1000 1000 FMN FMN . M 10 3PE D 1 301 602 3PE 3PE . N 9 LMT D 1 302 1002 LMT LMT . O 11 FES E 1 1001 1001 FES FES . P 12 FAD F 1 1501 1501 FAD FAD . Q 11 FES F 1 1502 1502 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . I 9 134.194 107.5 119.061 1 69.2 ? C1B LMT 503 B 1 HETATM 2 C C2B LMT . . . I 9 133.47 106.269 118.492 1 66.88 ? C2B LMT 503 B 1 HETATM 3 C C3B LMT . . . I 9 134.154 105.796 117.196 1 65.49 ? C3B LMT 503 B 1 HETATM 4 C C4B LMT . . . I 9 134.854 106.982 116.492 1 67.8 ? C4B LMT 503 B 1 HETATM 5 C C5B LMT . . . I 9 135.925 107.537 117.45 1 68.2 ? C5B LMT 503 B 1 HETATM 6 C C6B LMT . . . I 9 136.233 108.988 117.097 1 64.26 ? C6B LMT 503 B 1 HETATM 7 O O1B LMT . . . I 9 133.951 107.579 120.427 1 60.73 ? O1B LMT 503 B 1 HETATM 8 O O2B LMT . . . I 9 133.523 105.292 119.451 1 66.73 ? O2B LMT 503 B 1 HETATM 9 O O3B LMT . . . I 9 133.276 105.143 116.372 1 62.87 ? O3B LMT 503 B 1 HETATM 10 O O4' LMT . . . I 9 135.458 106.566 115.329 1 65.91 ? O4' LMT 503 B 1 HETATM 11 O O5B LMT . . . I 9 135.565 107.431 118.811 1 71.47 ? O5B LMT 503 B 1 HETATM 12 O O6B LMT . . . I 9 137.144 109.504 117.981 1 61.99 ? O6B LMT 503 B 1 HETATM 13 C C1' LMT . . . I 9 134.274 110.486 123.324 1 67.26 ? C1' LMT 503 B 1 HETATM 14 C C2' LMT . . . I 9 134.459 111.002 121.887 1 68.76 ? C2' LMT 503 B 1 HETATM 15 C C3' LMT . . . I 9 134.005 109.934 120.857 1 63.15 ? C3' LMT 503 B 1 HETATM 16 C C4' LMT . . . I 9 134.638 108.566 121.164 1 59.7 ? C4' LMT 503 B 1 HETATM 17 C C5' LMT . . . I 9 134.355 108.302 122.657 1 63.94 ? C5' LMT 503 B 1 HETATM 18 C C6' LMT . . . I 9 134.752 106.931 123.128 1 66.01 ? C6' LMT 503 B 1 HETATM 19 O O1' LMT . . . I 9 134.816 111.361 124.218 1 60.7 ? O1' LMT 503 B 1 HETATM 20 O O2' LMT . . . I 9 133.681 112.118 121.728 1 66.02 ? O2' LMT 503 B 1 HETATM 21 O O3' LMT . . . I 9 134.332 110.329 119.596 1 62.74 ? O3' LMT 503 B 1 HETATM 22 O O5' LMT . . . I 9 134.977 109.267 123.457 1 68.32 ? O5' LMT 503 B 1 HETATM 23 O O6' LMT . . . I 9 134.624 106.952 124.492 1 65.33 ? O6' LMT 503 B 1 HETATM 24 C C1 LMT . . . I 9 133.897 112.29 124.744 1 56.24 ? C1 LMT 503 B 1 HETATM 25 C C2 LMT . . . I 9 134.727 113.48 125.126 1 59.99 ? C2 LMT 503 B 1 HETATM 26 C C3 LMT . . . I 9 135.557 113.354 126.363 1 68.01 ? C3 LMT 503 B 1 HETATM 27 C C4 LMT . . . I 9 134.621 113.179 127.53 1 68.32 ? C4 LMT 503 B 1 HETATM 28 C C5 LMT . . . I 9 135.298 113.549 128.806 1 64.31 ? C5 LMT 503 B 1 HETATM 29 C C6 LMT . . . I 9 135.116 114.992 129.135 1 61.87 ? C6 LMT 503 B 1 HETATM 30 C C7 LMT . . . I 9 135.667 115.277 130.5 1 63.85 ? C7 LMT 503 B 1 HETATM 31 C C8 LMT . . . I 9 135.497 116.728 130.79 1 63.74 ? C8 LMT 503 B 1 HETATM 32 C C9 LMT . . . I 9 134.761 117.025 132.056 1 65.12 ? C9 LMT 503 B 1 HETATM 33 C C10 LMT . . . I 9 135.762 117.001 133.177 1 61.58 ? C10 LMT 503 B 1 HETATM 34 C C11 LMT . . . I 9 136.435 118.326 133.349 1 63.98 ? C11 LMT 503 B 1 HETATM 35 C C12 LMT . . . I 9 135.539 119.323 134.004 1 59.61 ? C12 LMT 503 B 1 HETATM 36 H H1B LMT . . . I 9 133.881 108.27 118.564 1 62.68 ? H1B LMT 503 B 1 HETATM 37 H H2B LMT . . . I 9 132.573 106.551 118.255 1 61.64 ? H2B LMT 503 B 1 HETATM 38 H H3B LMT . . . I 9 134.836 105.162 117.465 1 62.26 ? H3B LMT 503 B 1 HETATM 39 H H4B LMT . . . I 9 134.201 107.686 116.35 1 62.57 ? H4B LMT 503 B 1 HETATM 40 H H5B LMT . . . I 9 136.739 107.031 117.303 1 62.16 ? H5B LMT 503 B 1 HETATM 41 H "H6'2" LMT . . . I 9 135.392 109.468 117.042 1 62.14 ? "H6'2" LMT 503 B 1 HETATM 42 H "H6'1" LMT . . . I 9 136.539 109.015 116.177 1 62.2 ? "H6'1" LMT 503 B 1 HETATM 43 H H2O1 LMT . . . I 9 132.813 105.366 119.912 1 62.23 ? H2O1 LMT 503 B 1 HETATM 44 H H3O1 LMT . . . I 9 133.461 105.376 115.576 1 62.22 ? H3O1 LMT 503 B 1 HETATM 45 H H4O1 LMT . . . I 9 135.749 107.261 114.935 1 62.38 ? H4O1 LMT 503 B 1 HETATM 46 H H6B LMT . . . I 9 136.952 109.147 118.729 1 61.94 ? H6B LMT 503 B 1 HETATM 47 H H1' LMT . . . I 9 133.329 110.33 123.466 1 61.86 ? H1' LMT 503 B 1 HETATM 48 H H2' LMT . . . I 9 135.409 111.144 121.757 1 62.79 ? H2' LMT 503 B 1 HETATM 49 H H3' LMT . . . I 9 133.051 109.82 120.992 1 61.5 ? H3' LMT 503 B 1 HETATM 50 H H4' LMT . . . I 9 135.593 108.597 120.998 1 61.5 ? H4' LMT 503 B 1 HETATM 51 H H5' LMT . . . I 9 133.392 108.34 122.739 1 61.6 ? H5' LMT 503 B 1 HETATM 52 H H6D LMT . . . I 9 135.656 106.749 122.828 1 62.39 ? H6D LMT 503 B 1 HETATM 53 H H6E LMT . . . I 9 134.235 106.26 122.658 1 61.91 ? H6E LMT 503 B 1 HETATM 54 H H2O2 LMT . . . I 9 133.91 112.465 120.986 1 62.5 ? H2O2 LMT 503 B 1 HETATM 55 H H6' LMT . . . I 9 133.827 107.204 124.644 1 61.34 ? H6' LMT 503 B 1 HETATM 56 H H12 LMT . . . I 9 133.387 111.966 125.502 1 60.66 ? H12 LMT 503 B 1 HETATM 57 H H11 LMT . . . I 9 133.218 112.513 124.089 1 61.16 ? H11 LMT 503 B 1 HETATM 58 H H22 LMT . . . I 9 134.134 114.24 125.233 1 61.87 ? H22 LMT 503 B 1 HETATM 59 H H21 LMT . . . I 9 135.307 113.702 124.382 1 61.68 ? H21 LMT 503 B 1 HETATM 60 H H32 LMT . . . I 9 136.124 114.129 126.501 1 62.54 ? H32 LMT 503 B 1 HETATM 61 H H31 LMT . . . I 9 136.162 112.598 126.31 1 62.91 ? H31 LMT 503 B 1 HETATM 62 H H42 LMT . . . I 9 134.301 112.266 127.562 1 62.13 ? H42 LMT 503 B 1 HETATM 63 H H41 LMT . . . I 9 133.824 113.718 127.405 1 62.19 ? H41 LMT 503 B 1 HETATM 64 H H52 LMT . . . I 9 136.243 113.341 128.745 1 61.85 ? H52 LMT 503 B 1 HETATM 65 H H51 LMT . . . I 9 134.953 112.997 129.525 1 62.18 ? H51 LMT 503 B 1 HETATM 66 H H62 LMT . . . I 9 134.179 115.239 129.09 1 61.27 ? H62 LMT 503 B 1 HETATM 67 H H61 LMT . . . I 9 135.55 115.552 128.472 1 61.81 ? H61 LMT 503 B 1 HETATM 68 H H72 LMT . . . I 9 136.602 115.022 130.546 1 62.14 ? H72 LMT 503 B 1 HETATM 69 H H71 LMT . . . I 9 135.221 114.73 131.165 1 62.02 ? H71 LMT 503 B 1 HETATM 70 H H82 LMT . . . I 9 135.036 117.151 130.05 1 62.05 ? H82 LMT 503 B 1 HETATM 71 H H81 LMT . . . I 9 136.367 117.155 130.819 1 61.68 ? H81 LMT 503 B 1 HETATM 72 H H92 LMT . . . I 9 134.051 116.384 132.217 1 61.94 ? H92 LMT 503 B 1 HETATM 73 H H91 LMT . . . I 9 134.315 117.883 132.002 1 61.77 ? H91 LMT 503 B 1 HETATM 74 H H102 LMT . . . I 9 136.424 116.31 133.016 1 61.68 ? H102 LMT 503 B 1 HETATM 75 H H101 LMT . . . I 9 135.322 116.736 134 1 61.59 ? H101 LMT 503 B 1 HETATM 76 H H112 LMT . . . I 9 136.715 118.652 132.48 1 62.5 ? H112 LMT 503 B 1 HETATM 77 H H111 LMT . . . I 9 137.244 118.213 133.872 1 62.48 ? H111 LMT 503 B 1 HETATM 78 H H123 LMT . . . I 9 136.016 120.14 134.219 1 61.2 ? H123 LMT 503 B 1 HETATM 79 H H122 LMT . . . I 9 135.165 118.981 134.831 1 60.78 ? H122 LMT 503 B 1 HETATM 80 H H121 LMT . . . I 9 134.806 119.559 133.416 1 60.29 ? H121 LMT 503 B 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 83 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 80 #